RNA–Protein interactions for RNA: ENST00000457109.5

PKP4-207, Transcript of plakophilin 4, humanhuman

TSL 3

Gene PKP4, Length 520 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKP4-207ENST00000457109 ZNF790Q6PG37 636 aa11.78□□□□□ -0.52
PKP4-207ENST00000457109 BICDL1Q6ZP65 573 aa11.78□□□□□ -0.52
PKP4-207ENST00000457109 FMNL2Q96PY5 1086 aa11.78□□□□□ -0.52
PKP4-207ENST00000457109 UBR3Q6ZT12 1888 aa11.78□□□□□ -0.52
PKP4-207ENST00000457109 C10orf71Q711Q0 1435 aa11.77□□□□□ -0.52
PKP4-207ENST00000457109 BTBD11A6QL63 1104 aa11.77□□□□□ -0.53
PKP4-207ENST00000457109 U2AF1L5P0DN76 240 aaPredicted RBP11.77□□□□□ -0.53
PKP4-207ENST00000457109 KCNA3P22001 575 aa11.77□□□□□ -0.53
PKP4-207ENST00000457109 U2AF1Q01081 240 aaKnown RBP eCLIP11.77□□□□□ -0.53
PKP4-207ENST00000457109 NFIXQ14938 502 aa11.77□□□□□ -0.53
PKP4-207ENST00000457109 RNF181Q9P0P0 153 aa11.77□□□□□ -0.53
PKP4-207ENST00000457109 ZBTB1Q9Y2K1 713 aa11.77□□□□□ -0.53
PKP4-207ENST00000457109 CICQ96RK0 1608 aaPredicted RBP11.77□□□□□ -0.53
PKP4-207ENST00000457109 KDM2BQ8NHM5 1336 aa11.77□□□□□ -0.53
PKP4-207ENST00000457109 ADCY9O60503 1353 aa11.77□□□□□ -0.53
PKP4-207ENST00000457109 COL15A1P39059 1388 aa11.77□□□□□ -0.53
PKP4-207ENST00000457109 GOLGB1Q14789 3259 aaKnown RBP11.76□□□□□ -0.53
PKP4-207ENST00000457109 PRKAR2BP31323 418 aa11.76□□□□□ -0.53
PKP4-207ENST00000457109 IL17REQ8NFR9 667 aa11.76□□□□□ -0.53
PKP4-207ENST00000457109 PDZRN3Q9UPQ7 1066 aa11.76□□□□□ -0.53
PKP4-207ENST00000457109 KIF3CO14782 793 aa11.75□□□□□ -0.53
PKP4-207ENST00000457109 PDE6BP35913 854 aa11.75□□□□□ -0.53
PKP4-207ENST00000457109 C2CD5Q86YS7 1000 aa11.75□□□□□ -0.53
PKP4-207ENST00000457109 TTLL6Q8N841 843 aa11.75□□□□□ -0.53
PKP4-207ENST00000457109 ZNF496Q96IT1 587 aaPredicted RBP11.75□□□□□ -0.53
PKP4-207ENST00000457109 SETDB2Q96T68 719 aa11.75□□□□□ -0.53
PKP4-207ENST00000457109 IL6STP40189 918 aaPredicted RBP11.74□□□□□ -0.53
PKP4-207ENST00000457109 APLP1P51693 650 aa11.74□□□□□ -0.53
PKP4-207ENST00000457109 EIF5P55010 431 aaKnown RBP11.74□□□□□ -0.53
PKP4-207ENST00000457109 ZNF622Q969S3 477 aaKnown RBP eCLIP11.74□□□□□ -0.531e-11■□□□□ 8.8
PKP4-207ENST00000457109 TBC1D2BQ9UPU7 963 aa11.74□□□□□ -0.53
PKP4-207ENST00000457109 ZNF831Q5JPB2 1677 aa11.74□□□□□ -0.53
PKP4-207ENST00000457109 PNNQ9H307 717 aaKnown RBP11.73□□□□□ -0.53
PKP4-207ENST00000457109 HEG1Q9ULI3 1381 aa11.73□□□□□ -0.53
PKP4-207ENST00000457109 A1BGP04217 495 aa11.72□□□□□ -0.53
PKP4-207ENST00000457109 SNRPA1P09661 255 aaKnown RBP11.72□□□□□ -0.53
PKP4-207ENST00000457109 LMNB1P20700 586 aa11.72□□□□□ -0.53
PKP4-207ENST00000457109 PPP2R1AP30153 589 aa11.72□□□□□ -0.53
PKP4-207ENST00000457109 ST5P78524 1137 aa11.72□□□□□ -0.53
PKP4-207ENST00000457109 PHACTR3Q96KR7 559 aa11.72□□□□□ -0.53
PKP4-207ENST00000457109 BRIP1Q9BX63 1249 aa11.72□□□□□ -0.53
PKP4-207ENST00000457109 NMRK2Q9NPI5 230 aa11.72□□□□□ -0.53
PKP4-207ENST00000457109 ZNF652Q9Y2D9 606 aa11.72□□□□□ -0.53
PKP4-207ENST00000457109 C4AP0C0L4 1744 aa11.72□□□□□ -0.53
PKP4-207ENST00000457109 HTATSF1O43719 755 aaKnown RBP11.71□□□□□ -0.53
PKP4-207ENST00000457109 TBC1D9BQ66K14 1250 aa11.71□□□□□ -0.53
PKP4-207ENST00000457109 DPY19L2Q6NUT2 758 aa11.71□□□□□ -0.53
PKP4-207ENST00000457109 DZIP3Q86Y13 1208 aaKnown RBP11.71□□□□□ -0.53
PKP4-207ENST00000457109 RBM46Q8TBY0 533 aaKnown RBP11.71□□□□□ -0.53
PKP4-207ENST00000457109 RSPH6AQ9H0K4 717 aa11.71□□□□□ -0.53
PKP4-207ENST00000457109 BCL2L12Q9HB09 334 aa11.71□□□□□ -0.53
PKP4-207ENST00000457109 RRAGCQ9HB90 399 aa11.71□□□□□ -0.53
PKP4-207ENST00000457109 FSTL1Q12841 308 aa11.7□□□□□ -0.54
PKP4-207ENST00000457109 CNBD1Q8NA66 436 aa11.7□□□□□ -0.54
PKP4-207ENST00000457109 CNKSR1Q969H4 720 aa11.7□□□□□ -0.54
PKP4-207ENST00000457109 ZC3H4Q9UPT8 1303 aaKnown RBP11.69□□□□□ -0.54
PKP4-207ENST00000457109 GTF2E1P29083 439 aaPredicted RBP11.69□□□□□ -0.54
PKP4-207ENST00000457109 TAF7Q15545 349 aaPredicted RBP11.69□□□□□ -0.54
PKP4-207ENST00000457109 MCM10Q7L590 875 aa11.69□□□□□ -0.54
PKP4-207ENST00000457109 NBPF5PQ86XG9 351 aaPredicted RBP11.69□□□□□ -0.54
PKP4-207ENST00000457109 PNISRQ8TF01 805 aaKnown RBP11.69□□□□□ -0.54
PKP4-207ENST00000457109 ZNF219Q9P2Y4 722 aaPredicted RBP11.69□□□□□ -0.54
PKP4-207ENST00000457109 MRC1P22897 1456 aa11.69□□□□□ -0.54
PKP4-207ENST00000457109 CARMIL3Q8ND23 1372 aa11.68□□□□□ -0.54
PKP4-207ENST00000457109 KCNQ3O43525 872 aa11.68□□□□□ -0.54
PKP4-207ENST00000457109 VEGFAP15692 232 aaPredicted RBP11.68□□□□□ -0.54
PKP4-207ENST00000457109 RASSF7Q02833 373 aa11.68□□□□□ -0.54
PKP4-207ENST00000457109 SOGA3Q5TF21 947 aa11.68□□□□□ -0.54
PKP4-207ENST00000457109 CLEC4GQ6UXB4 293 aa11.68□□□□□ -0.54
PKP4-207ENST00000457109 TPTE2Q6XPS3 522 aa11.68□□□□□ -0.54
PKP4-207ENST00000457109 USP16Q9Y5T5 823 aa11.68□□□□□ -0.54
PKP4-207ENST00000457109 COL5A3P25940 1745 aaPredicted RBP11.68□□□□□ -0.54
PKP4-207ENST00000457109 CEMIPQ8WUJ3 1361 aa11.67□□□□□ -0.54
PKP4-207ENST00000457109 KCPQ6ZWJ8 1503 aa11.67□□□□□ -0.54
PKP4-207ENST00000457109 GLTPD2A6NH11 291 aa11.67□□□□□ -0.54
PKP4-207ENST00000457109 C21orf2O43822 256 aa11.67□□□□□ -0.54
PKP4-207ENST00000457109 PRR5LQ6MZQ0 368 aa11.67□□□□□ -0.54
PKP4-207ENST00000457109 CCDC24Q8N4L8 307 aa11.67□□□□□ -0.54
PKP4-207ENST00000457109 SMC1BQ8NDV3 1235 aa11.67□□□□□ -0.54
PKP4-207ENST00000457109 MAPK8IP3Q9UPT6 1336 aa11.66□□□□□ -0.54
PKP4-207ENST00000457109 CAMTA2O94983 1202 aa11.66□□□□□ -0.54
PKP4-207ENST00000457109 DCTN1Q14203 1278 aa11.66□□□□□ -0.54
PKP4-207ENST00000457109 ERFEQ4G0M1 354 aa11.66□□□□□ -0.54
PKP4-207ENST00000457109 STYK1Q6J9G0 422 aa11.66□□□□□ -0.54
PKP4-207ENST00000457109 MASTLQ96GX5 879 aa11.66□□□□□ -0.54
PKP4-207ENST00000457109 MYH14Q7Z406 1995 aaKnown RBP11.66□□□□□ -0.54
PKP4-207ENST00000457109 SCN11AQ9UI33 1791 aa11.66□□□□□ -0.54
PKP4-207ENST00000457109 N4BP2Q86UW6 1770 aaPredicted RBP11.65□□□□□ -0.54
PKP4-207ENST00000457109 PIP4K2AP48426 406 aaPredicted RBP11.65□□□□□ -0.54
PKP4-207ENST00000457109 NIP7Q9Y221 180 aaKnown RBP eCLIP11.65□□□□□ -0.54
PKP4-207ENST00000457109 COL3A1P02461 1466 aaPredicted RBP11.64□□□□□ -0.55
PKP4-207ENST00000457109 TJP1Q07157 1748 aa11.64□□□□□ -0.55
PKP4-207ENST00000457109 FAM177BA6PVY3 158 aa11.64□□□□□ -0.55
PKP4-207ENST00000457109 IFFO2Q5TF58 517 aa11.64□□□□□ -0.55
PKP4-207ENST00000457109 NGEFQ8N5V2 710 aa11.64□□□□□ -0.55
PKP4-207ENST00000457109 TAOK3Q9H2K8 898 aa11.64□□□□□ -0.55
PKP4-207ENST00000457109 MIS18AQ9NYP9 233 aa11.64□□□□□ -0.55
PKP4-207ENST00000457109 KIF13BQ9NQT8 1826 aa11.63□□□□□ -0.55
PKP4-207ENST00000457109 RGL2O15211 777 aa11.63□□□□□ -0.55
PKP4-207ENST00000457109 SRGNP10124 158 aa11.63□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms