RNA–Protein interactions for RNA: ENST00000454849.5

MSH2-203, Transcript of mutS homolog 2, humanhuman

TSL 4

Gene MSH2, Length 560 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH2-203ENST00000454849 CCDC184Q52MB2 194 aa32.85■■■□□ 2.85
MSH2-203ENST00000454849 PRAMEF22A3QJZ6 481 aa32.84■■■□□ 2.85
MSH2-203ENST00000454849 MMP10P09238 476 aa32.84■■■□□ 2.85
MSH2-203ENST00000454849 GYS1P13807 737 aa32.84■■■□□ 2.85
MSH2-203ENST00000454849 STARD3NLO95772 234 aa32.83■■■□□ 2.85
MSH2-203ENST00000454849 SOS1Q07889 1333 aaPredicted RBP32.82■■■□□ 2.84
MSH2-203ENST00000454849 TMPOP42166 694 aaKnown RBP32.82■■■□□ 2.84
MSH2-203ENST00000454849 CICQ96RK0 1608 aaPredicted RBP32.81■■■□□ 2.84
MSH2-203ENST00000454849 DCAF8L1A6NGE4 600 aa32.81■■■□□ 2.84
MSH2-203ENST00000454849 A1BGP04217 495 aa32.8■■■□□ 2.84
MSH2-203ENST00000454849 ZNF330Q9Y3S2 320 aaPredicted RBP32.8■■■□□ 2.84
MSH2-203ENST00000454849 PIP4K2AP48426 406 aaPredicted RBP32.79■■■□□ 2.84
MSH2-203ENST00000454849 FKBP8Q14318 412 aa32.79■■■□□ 2.84
MSH2-203ENST00000454849 PELP1Q8IZL8 1130 aaKnown RBP32.79■■■□□ 2.84
MSH2-203ENST00000454849 NLGN1Q8N2Q7 840 aa32.79■■■□□ 2.84
MSH2-203ENST00000454849 RUNDC1Q96C34 613 aa32.79■■■□□ 2.84
MSH2-203ENST00000454849 USP16Q9Y5T5 823 aa32.79■■■□□ 2.84
MSH2-203ENST00000454849 USP42Q9H9J4 1324 aaKnown RBP32.77■■■□□ 2.84
MSH2-203ENST00000454849 USPL1Q5W0Q7 1092 aa32.77■■■□□ 2.84
MSH2-203ENST00000454849 TEX13AQ9BXU3 409 aaPredicted RBP32.77■■■□□ 2.84
MSH2-203ENST00000454849 C4AP0C0L4 1744 aa32.77■■■□□ 2.84
MSH2-203ENST00000454849 ZPR1O75312 459 aa32.76■■■□□ 2.83
MSH2-203ENST00000454849 COL15A1P39059 1388 aa32.75■■■□□ 2.83
MSH2-203ENST00000454849 ANP32CO43423 234 aa32.75■■■□□ 2.83
MSH2-203ENST00000454849 SNRPA1P09661 255 aaKnown RBP32.74■■■□□ 2.83
MSH2-203ENST00000454849 WWC3Q9ULE0 1092 aa32.74■■■□□ 2.83
MSH2-203ENST00000454849 GPR162Q16538 588 aa32.73■■■□□ 2.83
MSH2-203ENST00000454849 SENP3-EIF4A1A0A087X0R7 540 aa32.72■■■□□ 2.83
MSH2-203ENST00000454849 EIF5P55010 431 aaKnown RBP32.72■■■□□ 2.83
MSH2-203ENST00000454849 CD2APQ9Y5K6 639 aa32.72■■■□□ 2.83
MSH2-203ENST00000454849 PNISRQ8TF01 805 aaKnown RBP32.71■■■□□ 2.83
MSH2-203ENST00000454849 NARFQ9UHQ1 456 aa32.7■■■□□ 2.83
MSH2-203ENST00000454849 TBC1D2BQ9UPU7 963 aa32.7■■■□□ 2.83
MSH2-203ENST00000454849 PARP3Q9Y6F1 533 aa32.7■■■□□ 2.83
MSH2-203ENST00000454849 DDR1Q08345 913 aa32.69■■■□□ 2.82
MSH2-203ENST00000454849 TRIM35Q9UPQ4 493 aa32.69■■■□□ 2.82
MSH2-203ENST00000454849 BCL2L12Q9HB09 334 aa32.68■■■□□ 2.82
MSH2-203ENST00000454849 TSPYL4Q9UJ04 414 aa32.68■■■□□ 2.82
MSH2-203ENST00000454849 EIF4A1P60842 406 aaKnown RBP32.67■■■□□ 2.82
MSH2-203ENST00000454849 LMOD3Q0VAK6 560 aa32.67■■■□□ 2.82
MSH2-203ENST00000454849 APAF1O14727 1248 aa32.66■■■□□ 2.82
MSH2-203ENST00000454849 LAS1LQ9Y4W2 734 aaKnown RBP32.66■■■□□ 2.82
MSH2-203ENST00000454849 IL6STP40189 918 aaPredicted RBP32.64■■■□□ 2.82
MSH2-203ENST00000454849 BICDL1Q6ZP65 573 aa32.64■■■□□ 2.82
MSH2-203ENST00000454849 MRS2Q9HD23 443 aa32.64■■■□□ 2.82
MSH2-203ENST00000454849 A0A087WZG4 1122 aa32.63■■■□□ 2.81
MSH2-203ENST00000454849 NBPF26B4DH59 902 aa32.63■■■□□ 2.81
MSH2-203ENST00000454849 YBX3P16989 372 aaKnown RBP eCLIP32.63■■■□□ 2.812e-6■□□□□ 9.4
MSH2-203ENST00000454849 TM4SF1P30408 202 aa32.63■■■□□ 2.81
MSH2-203ENST00000454849 NFIXQ14938 502 aa32.63■■■□□ 2.81
MSH2-203ENST00000454849 NBPF10Q6P3W6 841 aaKnown RBP32.63■■■□□ 2.81
MSH2-203ENST00000454849 NBPF15Q8N660 670 aa32.63■■■□□ 2.81
MSH2-203ENST00000454849 GIGYF1O75420 1035 aaPredicted RBP32.62■■■□□ 2.81
MSH2-203ENST00000454849 NPM2Q86SE8 214 aaKnown RBP32.62■■■□□ 2.81
MSH2-203ENST00000454849 KDM3BQ7LBC6 1761 aa32.61■■■□□ 2.81
MSH2-203ENST00000454849 POLRMTO00411 1230 aaKnown RBP32.61■■■□□ 2.81
MSH2-203ENST00000454849 A0A0G2JLW4 131 aa32.59■■■□□ 2.81
MSH2-203ENST00000454849 NGEFQ8N5V2 710 aa32.59■■■□□ 2.81
MSH2-203ENST00000454849 DZIP3Q86Y13 1208 aaKnown RBP32.58■■■□□ 2.81
MSH2-203ENST00000454849 YY1P25490 414 aa32.57■■■□□ 2.8
MSH2-203ENST00000454849 TBC1D9BQ66K14 1250 aa32.57■■■□□ 2.8
MSH2-203ENST00000454849 CAMTA2O94983 1202 aa32.56■■■□□ 2.8
MSH2-203ENST00000454849 C10orf71Q711Q0 1435 aa32.55■■■□□ 2.8
MSH2-203ENST00000454849 KRT24Q2M2I5 525 aa32.55■■■□□ 2.8
MSH2-203ENST00000454849 DPEP1P16444 411 aa32.54■■■□□ 2.8
MSH2-203ENST00000454849 EIF2S2P20042 333 aaKnown RBP32.54■■■□□ 2.8
MSH2-203ENST00000454849 GOLGB1Q14789 3259 aaKnown RBP32.53■■■□□ 2.8
MSH2-203ENST00000454849 UTRNP46939 3433 aa32.53■■■□□ 2.8
MSH2-203ENST00000454849 CHL1O00533 1208 aa32.53■■■□□ 2.8
MSH2-203ENST00000454849 SERPINB2P05120 415 aa32.53■■■□□ 2.8
MSH2-203ENST00000454849 MYL6BP14649 208 aa32.53■■■□□ 2.8
MSH2-203ENST00000454849 NECTIN2Q92692 538 aa32.53■■■□□ 2.8
MSH2-203ENST00000454849 PXDNLA1KZ92 1463 aa32.51■■■□□ 2.79
MSH2-203ENST00000454849 CCDC24Q8N4L8 307 aa32.51■■■□□ 2.79
MSH2-203ENST00000454849 TGFB2P61812 414 aa32.5■■■□□ 2.79
MSH2-203ENST00000454849 BABAM1Q9NWV8 329 aa32.5■■■□□ 2.79
MSH2-203ENST00000454849 N4BP2Q86UW6 1770 aaPredicted RBP32.49■■■□□ 2.79
MSH2-203ENST00000454849 CHRNA5P30532 468 aa32.48■■■□□ 2.79
MSH2-203ENST00000454849 ANXA1P04083 346 aa32.46■■■□□ 2.79
MSH2-203ENST00000454849 KIF13BQ9NQT8 1826 aa32.46■■■□□ 2.79
MSH2-203ENST00000454849 LAMB4A4D0S4 1761 aa32.45■■■□□ 2.79
MSH2-203ENST00000454849 GRIN3BO60391 1043 aa32.45■■■□□ 2.79
MSH2-203ENST00000454849 HLFQ16534 295 aa32.45■■■□□ 2.79
MSH2-203ENST00000454849 TTLL7Q6ZT98 887 aa32.45■■■□□ 2.79
MSH2-203ENST00000454849 BCS1LQ9Y276 419 aa32.45■■■□□ 2.79
MSH2-203ENST00000454849 SCN7AQ01118 1682 aa32.44■■■□□ 2.78
MSH2-203ENST00000454849 KCNA3P22001 575 aa32.44■■■□□ 2.78
MSH2-203ENST00000454849 FAM9BQ8IZU0 186 aa32.44■■■□□ 2.78
MSH2-203ENST00000454849 CFAP44Q96MT7 982 aa32.44■■■□□ 2.78
MSH2-203ENST00000454849 SETDB2Q96T68 719 aa32.44■■■□□ 2.78
MSH2-203ENST00000454849 MBIPQ9NS73 344 aa32.44■■■□□ 2.78
MSH2-203ENST00000454849 SALL2Q9Y467 1007 aaPredicted RBP32.44■■■□□ 2.78
MSH2-203ENST00000454849 AFDNP55196 1824 aaKnown RBP32.43■■■□□ 2.78
MSH2-203ENST00000454849 PROSER3Q2NL68 480 aa32.43■■■□□ 2.78
MSH2-203ENST00000454849 KIAA1551Q9HCM1 1747 aa32.43■■■□□ 2.78
MSH2-203ENST00000454849 CARMIL3Q8ND23 1372 aa32.42■■■□□ 2.78
MSH2-203ENST00000454849 FAM177BA6PVY3 158 aa32.41■■■□□ 2.78
MSH2-203ENST00000454849 PDIA6Q15084 440 aa32.41■■■□□ 2.78
MSH2-203ENST00000454849 ZNF853P0CG23 659 aa32.39■■■□□ 2.78
MSH2-203ENST00000454849 ZBTB3Q9H5J0 574 aa32.39■■■□□ 2.78
Retrieved 100 of 20,778 RNA–protein pairs in 227 ms