RNA–Protein interactions for RNA: ENST00000454129.5

HCG18-239, Transcript of HLA complex group 18, humanhuman

TSL 4 BASIC

Gene HCG18, Length 4,433 nt, Biotype antisense RNA, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HCG18-239ENST00000454129 DISP3Q9P2K9 1392 aa7.73□□□□□ -1.17
HCG18-239ENST00000454129 CHD1O14646 1710 aa7.73□□□□□ -1.17
HCG18-239ENST00000454129 SYCE3A1L190 88 aa7.72□□□□□ -1.17
HCG18-239ENST00000454129 MAP3K12Q12852 859 aa7.72□□□□□ -1.17
HCG18-239ENST00000454129 IFNL2Q8IZJ0 200 aa7.72□□□□□ -1.17
HCG18-239ENST00000454129 NGLY1Q96IV0 654 aa7.72□□□□□ -1.17
HCG18-239ENST00000454129 LARP6Q9BRS8 491 aaKnown RBP7.72□□□□□ -1.17
HCG18-239ENST00000454129 MKNK2Q9HBH9 465 aa7.72□□□□□ -1.17
HCG18-239ENST00000454129 PTPRCP08575 1304 aa7.72□□□□□ -1.17
HCG18-239ENST00000454129 TTC21BQ7Z4L5 1316 aa7.72□□□□□ -1.17
HCG18-239ENST00000454129 MBD5Q9P267 1494 aa7.72□□□□□ -1.17
HCG18-239ENST00000454129 MAP3K11Q16584 847 aa7.72□□□□□ -1.17
HCG18-239ENST00000454129 UBE3BQ7Z3V4 1068 aa7.72□□□□□ -1.17
HCG18-239ENST00000454129 SNRKQ9NRH2 765 aa7.72□□□□□ -1.17
HCG18-239ENST00000454129 MAP3K2Q9Y2U5 619 aa7.72□□□□□ -1.17
HCG18-239ENST00000454129 POLR3DP05423 398 aaPredicted RBP7.72□□□□□ -1.17
HCG18-239ENST00000454129 GUCY1B3Q02153 619 aa7.72□□□□□ -1.17
HCG18-239ENST00000454129 CAMK4Q16566 473 aa7.72□□□□□ -1.17
HCG18-239ENST00000454129 HSP90AB3PQ58FF7 597 aa7.72□□□□□ -1.17
HCG18-239ENST00000454129 NOM1Q5C9Z4 860 aaKnown RBP7.72□□□□□ -1.17
HCG18-239ENST00000454129 LDHAL6AQ6ZMR3 332 aa7.72□□□□□ -1.17
HCG18-239ENST00000454129 PPP1R42Q7Z4L9 355 aa7.72□□□□□ -1.17
HCG18-239ENST00000454129 UTP3Q9NQZ2 479 aaKnown RBP eCLIP7.72□□□□□ -1.174e-7■■■■■ 57.7
HCG18-239ENST00000454129 SKIDA1Q1XH10 827 aa7.72□□□□□ -1.17
HCG18-239ENST00000454129 ERCC4Q92889 916 aaPredicted RBP7.72□□□□□ -1.17
HCG18-239ENST00000454129 TBC1D2Q9BYX2 928 aa7.72□□□□□ -1.17
HCG18-239ENST00000454129 ANKIB1Q9P2G1 1089 aa7.72□□□□□ -1.17
HCG18-239ENST00000454129 FANCAO15360 1455 aa7.71□□□□□ -1.17
HCG18-239ENST00000454129 ANKRD18BA2A2Z9 1011 aa7.71□□□□□ -1.17
HCG18-239ENST00000454129 ZNF213O14771 459 aa7.71□□□□□ -1.17
HCG18-239ENST00000454129 RANBP6O60518 1105 aaKnown RBP7.71□□□□□ -1.17
HCG18-239ENST00000454129 IGHDP01880 384 aa7.71□□□□□ -1.17
HCG18-239ENST00000454129 JARID2Q92833 1246 aaPredicted RBP7.71□□□□□ -1.17
HCG18-239ENST00000454129 SCAND2PQ9GZW5 306 aaPredicted RBP7.71□□□□□ -1.17
HCG18-239ENST00000454129 SH2B1Q9NRF2 756 aaPredicted RBP7.71□□□□□ -1.17
HCG18-239ENST00000454129 TMOD2Q9NZR1 351 aa7.71□□□□□ -1.17
HCG18-239ENST00000454129 LIMCH1Q9UPQ0 1083 aa7.71□□□□□ -1.17
HCG18-239ENST00000454129 ASXL2Q76L83 1435 aa7.71□□□□□ -1.18
HCG18-239ENST00000454129 ESPNB1AK53 854 aa7.71□□□□□ -1.18
HCG18-239ENST00000454129 ZNF76P36508 570 aa7.71□□□□□ -1.18
HCG18-239ENST00000454129 TSHZ3Q63HK5 1081 aa7.71□□□□□ -1.18
HCG18-239ENST00000454129 CCDC112Q8NEF3 446 aa7.71□□□□□ -1.18
HCG18-239ENST00000454129 LUC7LQ9NQ29 371 aaKnown RBP7.71□□□□□ -1.18
HCG18-239ENST00000454129 KDM5CP41229 1560 aa7.71□□□□□ -1.18
HCG18-239ENST00000454129 CCDC196A0A1B0GTZ2 297 aa7.71□□□□□ -1.18
HCG18-239ENST00000454129 DHX8Q14562 1220 aaKnown RBP7.71□□□□□ -1.18
HCG18-239ENST00000454129 ANKRD24Q8TF21 1146 aa7.71□□□□□ -1.18
HCG18-239ENST00000454129 C8orf76Q96K31 380 aa7.71□□□□□ -1.18
HCG18-239ENST00000454129 ZNF287Q9HBT7 754 aa7.71□□□□□ -1.18
HCG18-239ENST00000454129 NUP153P49790 1475 aaKnown RBP7.71□□□□□ -1.18
HCG18-239ENST00000454129 CBFA2T2O43439 604 aa7.7□□□□□ -1.18
HCG18-239ENST00000454129 RBM10P98175 930 aaKnown RBP7.7□□□□□ -1.18
HCG18-239ENST00000454129 CFAP100Q494V2 611 aa7.7□□□□□ -1.18
HCG18-239ENST00000454129 BMP2KLQ5H9B9 411 aa7.7□□□□□ -1.18
HCG18-239ENST00000454129 WWC2Q6AWC2 1192 aa7.7□□□□□ -1.18
HCG18-239ENST00000454129 TBC1D9Q6ZT07 1266 aa7.7□□□□□ -1.18
HCG18-239ENST00000454129 CADPS2Q86UW7 1296 aa7.7□□□□□ -1.18
HCG18-239ENST00000454129 DZIP1Q86YF9 867 aaKnown RBP7.7□□□□□ -1.18
HCG18-239ENST00000454129 NSD2O96028 1365 aa7.7□□□□□ -1.18
HCG18-239ENST00000454129 GOLIM4O00461 696 aa7.7□□□□□ -1.18
HCG18-239ENST00000454129 MPHOSPH10O00566 681 aaKnown RBP7.7□□□□□ -1.18
HCG18-239ENST00000454129 IQCA1Q86XH1 822 aa7.7□□□□□ -1.18
HCG18-239ENST00000454129 CTCFLQ8NI51 663 aaPredicted RBP7.7□□□□□ -1.18
HCG18-239ENST00000454129 KAT6BQ8WYB5 2073 aa7.7□□□□□ -1.18
HCG18-239ENST00000454129 KIF14Q15058 1648 aa7.7□□□□□ -1.18
HCG18-239ENST00000454129 DCAF8L1A6NGE4 600 aa7.7□□□□□ -1.18
HCG18-239ENST00000454129 HMGB1P09429 215 aaKnown RBP7.7□□□□□ -1.18
HCG18-239ENST00000454129 SLC5A1P13866 664 aa7.7□□□□□ -1.18
HCG18-239ENST00000454129 SSFA2P28290 1259 aa7.7□□□□□ -1.18
HCG18-239ENST00000454129 RDXP35241 583 aaKnown RBP7.7□□□□□ -1.18
HCG18-239ENST00000454129 CCT2P78371 535 aaKnown RBP7.7□□□□□ -1.18
HCG18-239ENST00000454129 KDM2BQ8NHM5 1336 aa7.7□□□□□ -1.18
HCG18-239ENST00000454129 TCOF1Q13428 1488 aaKnown RBP7.7□□□□□ -1.18
HCG18-239ENST00000454129 SMTNL1A8MU46 457 aa7.7□□□□□ -1.18
HCG18-239ENST00000454129 ANKRD13DQ6ZTN6 518 aa7.7□□□□□ -1.18
HCG18-239ENST00000454129 CRACR2BQ8N4Y2 399 aaPredicted RBP7.7□□□□□ -1.18
HCG18-239ENST00000454129 EVI5LQ96CN4 794 aa7.7□□□□□ -1.18
HCG18-239ENST00000454129 TFIP11Q9UBB9 837 aaKnown RBP7.7□□□□□ -1.18
HCG18-239ENST00000454129 IL16Q14005 1332 aa7.69□□□□□ -1.18
HCG18-239ENST00000454129 IFIT3O14879 490 aaKnown RBP7.69□□□□□ -1.18
HCG18-239ENST00000454129 SNRPA1P09661 255 aaKnown RBP7.69□□□□□ -1.18
HCG18-239ENST00000454129 ZNF444Q8N0Y2 327 aaPredicted RBP7.69□□□□□ -1.18
HCG18-239ENST00000454129 MEIS3Q99687 375 aa7.69□□□□□ -1.18
HCG18-239ENST00000454129 MYO6Q9UM54 1294 aa7.69□□□□□ -1.18
HCG18-239ENST00000454129 UGGT2Q9NYU1 1516 aa7.69□□□□□ -1.18
HCG18-239ENST00000454129 EIF5P55010 431 aaKnown RBP7.69□□□□□ -1.18
HCG18-239ENST00000454129 AXDND1Q5T1B0 1012 aaPredicted RBP7.69□□□□□ -1.18
HCG18-239ENST00000454129 TEX13AQ9BXU3 409 aaPredicted RBP7.69□□□□□ -1.18
HCG18-239ENST00000454129 CWC25Q9NXE8 425 aaPredicted RBP7.69□□□□□ -1.18
HCG18-239ENST00000454129 CEP131Q9UPN4 1083 aa7.69□□□□□ -1.18
HCG18-239ENST00000454129 FAM135AQ9P2D6 1515 aa7.69□□□□□ -1.18
HCG18-239ENST00000454129 GPATCH8Q9UKJ3 1502 aaKnown RBP7.69□□□□□ -1.18
HCG18-239ENST00000454129 KLHL10Q6JEL2 608 aa7.69□□□□□ -1.18
HCG18-239ENST00000454129 PAF1Q8N7H5 531 aa7.69□□□□□ -1.18
HCG18-239ENST00000454129 GDPD2Q9HCC8 539 aa7.69□□□□□ -1.18
HCG18-239ENST00000454129 PCDHB15Q9Y5E8 787 aa7.69□□□□□ -1.18
HCG18-239ENST00000454129 SLC12A7Q9Y666 1083 aa7.69□□□□□ -1.18
HCG18-239ENST00000454129 C6orf229H3BNL8 230 aa7.68□□□□□ -1.18
HCG18-239ENST00000454129 HMGB2P26583 209 aaKnown RBP7.68□□□□□ -1.18
HCG18-239ENST00000454129 C8orf34Q49A92 452 aa7.68□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms