RNA–Protein interactions for RNA: ENST00000453847.2

HMGN3P1-201, Transcript of high mobility group nucleosomal binding domain 3 pseudogene 1, humanhuman

BASIC

Gene HMGN3P1, Length 193 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN3P1-201ENST00000453847 PRPF40AO75400 957 aaKnown RBP6.6□□□□□ -1.35
HMGN3P1-201ENST00000453847 ERCC5P28715 1186 aaPredicted RBP6.6□□□□□ -1.35
HMGN3P1-201ENST00000453847 DAB2P98082 770 aa6.6□□□□□ -1.35
HMGN3P1-201ENST00000453847 TMC4Q7Z404 712 aa6.6□□□□□ -1.35
HMGN3P1-201ENST00000453847 FAM177A1Q8N128 213 aaPredicted RBP6.6□□□□□ -1.35
HMGN3P1-201ENST00000453847 EHBP1Q8NDI1 1231 aa6.6□□□□□ -1.35
HMGN3P1-201ENST00000453847 ZDHHC1Q8WTX9 485 aa6.6□□□□□ -1.35
HMGN3P1-201ENST00000453847 VTI1AQ96AJ9 217 aa6.6□□□□□ -1.35
HMGN3P1-201ENST00000453847 CFHR5Q9BXR6 569 aa6.6□□□□□ -1.35
HMGN3P1-201ENST00000453847 MAPK8P45983 427 aa6.59□□□□□ -1.35
HMGN3P1-201ENST00000453847 RPIAP49247 311 aa6.59□□□□□ -1.35
HMGN3P1-201ENST00000453847 MYT1Q01538 1121 aa6.59□□□□□ -1.35
HMGN3P1-201ENST00000453847 DHX9Q08211 1270 aaKnown RBP6.59□□□□□ -1.35
HMGN3P1-201ENST00000453847 ETFBKMTQ8IXQ9 262 aa6.59□□□□□ -1.35
HMGN3P1-201ENST00000453847 PIK3R5Q8WYR1 880 aa6.59□□□□□ -1.35
HMGN3P1-201ENST00000453847 ALKBH8Q96BT7 664 aaKnown RBP6.59□□□□□ -1.35
HMGN3P1-201ENST00000453847 ESF1Q9H501 851 aaKnown RBP6.59□□□□□ -1.35
HMGN3P1-201ENST00000453847 EML1O00423 815 aa6.58□□□□□ -1.36
HMGN3P1-201ENST00000453847 PSMA6P60900 246 aaKnown RBP6.58□□□□□ -1.36
HMGN3P1-201ENST00000453847 ENOX2Q16206 610 aaKnown RBP6.58□□□□□ -1.36
HMGN3P1-201ENST00000453847 ALKBH2Q6NS38 261 aa6.58□□□□□ -1.36
HMGN3P1-201ENST00000453847 LIAT1Q6ZQX7 453 aa6.58□□□□□ -1.36
HMGN3P1-201ENST00000453847 CYP2U1Q7Z449 544 aa6.58□□□□□ -1.36
HMGN3P1-201ENST00000453847 CCDC116Q8IYX3 515 aa6.58□□□□□ -1.36
HMGN3P1-201ENST00000453847 GJD3Q8N144 294 aa6.58□□□□□ -1.36
HMGN3P1-201ENST00000453847 TMC1Q8TDI8 760 aa6.58□□□□□ -1.36
HMGN3P1-201ENST00000453847 DMRTB1Q96MA1 342 aa6.58□□□□□ -1.36
HMGN3P1-201ENST00000453847 NIF3L1Q9GZT8 377 aa6.58□□□□□ -1.36
HMGN3P1-201ENST00000453847 ARHGEF10LQ9HCE6 1279 aa6.58□□□□□ -1.36
HMGN3P1-201ENST00000453847 UTP3Q9NQZ2 479 aaKnown RBP eCLIP6.58□□□□□ -1.36
HMGN3P1-201ENST00000453847 POLIQ9UNA4 740 aa6.58□□□□□ -1.36
HMGN3P1-201ENST00000453847 ADH1CP00326 375 aa6.57□□□□□ -1.36
HMGN3P1-201ENST00000453847 FANCCQ00597 558 aa6.57□□□□□ -1.36
HMGN3P1-201ENST00000453847 TMEM87AQ8NBN3 555 aa6.57□□□□□ -1.36
HMGN3P1-201ENST00000453847 FHDC1Q9C0D6 1143 aaPredicted RBP6.57□□□□□ -1.36
HMGN3P1-201ENST00000453847 ITGBL1O95965 494 aaPredicted RBP6.56□□□□□ -1.36
HMGN3P1-201ENST00000453847 HIRAP54198 1017 aaPredicted RBP6.56□□□□□ -1.36
HMGN3P1-201ENST00000453847 NR5A1Q13285 461 aa6.56□□□□□ -1.36
HMGN3P1-201ENST00000453847 AAMPQ13685 434 aa6.56□□□□□ -1.36
HMGN3P1-201ENST00000453847 TEAD4Q15561 434 aa6.56□□□□□ -1.36
HMGN3P1-201ENST00000453847 ESCO1Q5FWF5 840 aa6.56□□□□□ -1.36
HMGN3P1-201ENST00000453847 NT5DC4Q86YG4 428 aa6.56□□□□□ -1.36
HMGN3P1-201ENST00000453847 CNKSR1Q969H4 720 aa6.56□□□□□ -1.36
HMGN3P1-201ENST00000453847 ESYT1Q9BSJ8 1104 aa6.56□□□□□ -1.36
HMGN3P1-201ENST00000453847 KLK14Q9P0G3 267 aa6.56□□□□□ -1.36
HMGN3P1-201ENST00000453847 HCN4Q9Y3Q4 1203 aa6.56□□□□□ -1.36
HMGN3P1-201ENST00000453847 PDGFAP04085 211 aa6.55□□□□□ -1.36
HMGN3P1-201ENST00000453847 BRD2P25440 801 aaKnown RBP6.55□□□□□ -1.36
HMGN3P1-201ENST00000453847 MZF1P28698 734 aaPredicted RBP6.55□□□□□ -1.36
HMGN3P1-201ENST00000453847 NOS2P35228 1153 aa6.55□□□□□ -1.36
HMGN3P1-201ENST00000453847 XPCQ01831 940 aaPredicted RBP6.55□□□□□ -1.36
HMGN3P1-201ENST00000453847 KCNC4Q03721 635 aa6.55□□□□□ -1.36
HMGN3P1-201ENST00000453847 PPP1R18Q6NYC8 613 aa6.55□□□□□ -1.36
HMGN3P1-201ENST00000453847 C7orf43Q8WVR3 580 aa6.55□□□□□ -1.36
HMGN3P1-201ENST00000453847 NGLY1Q96IV0 654 aa6.55□□□□□ -1.36
HMGN3P1-201ENST00000453847 PUS7Q96PZ0 661 aaKnown RBP6.55□□□□□ -1.36
HMGN3P1-201ENST00000453847 TINF2Q9BSI4 451 aa6.55□□□□□ -1.36
HMGN3P1-201ENST00000453847 PARP3Q9Y6F1 533 aa6.55□□□□□ -1.36
HMGN3P1-201ENST00000453847 PNMA6FA0A0J9YX94 578 aa6.54□□□□□ -1.36
HMGN3P1-201ENST00000453847 SERTM1A2A2V5 107 aa6.54□□□□□ -1.36
HMGN3P1-201ENST00000453847 SORBS3O60504 671 aa6.54□□□□□ -1.36
HMGN3P1-201ENST00000453847 CTSHP09668 335 aa6.54□□□□□ -1.36
HMGN3P1-201ENST00000453847 CENPCQ03188 943 aa6.54□□□□□ -1.36
HMGN3P1-201ENST00000453847 CBLBQ13191 982 aa6.54□□□□□ -1.36
HMGN3P1-201ENST00000453847 PDE3BQ13370 1112 aa6.54□□□□□ -1.36
HMGN3P1-201ENST00000453847 TLR1Q15399 786 aa6.54□□□□□ -1.36
HMGN3P1-201ENST00000453847 C11orf91Q3C1V1 193 aa6.54□□□□□ -1.36
HMGN3P1-201ENST00000453847 ALDH16A1Q8IZ83 802 aa6.54□□□□□ -1.36
HMGN3P1-201ENST00000453847 ABTB2Q8N961 1025 aa6.54□□□□□ -1.36
HMGN3P1-201ENST00000453847 EDEM1Q92611 657 aa6.54□□□□□ -1.36
HMGN3P1-201ENST00000453847 KLRG1Q96E93 195 aa6.54□□□□□ -1.36
HMGN3P1-201ENST00000453847 GGNBP2Q9H3C7 697 aa6.54□□□□□ -1.36
HMGN3P1-201ENST00000453847 PPP1R1BQ9UD71 204 aaPredicted RBP6.54□□□□□ -1.36
HMGN3P1-201ENST00000453847 BCS1LQ9Y276 419 aa6.54□□□□□ -1.36
HMGN3P1-201ENST00000453847 EMILIN1Q9Y6C2 1016 aa6.54□□□□□ -1.36
HMGN3P1-201ENST00000453847 CD2BP2O95400 341 aaKnown RBP6.53□□□□□ -1.36
HMGN3P1-201ENST00000453847 DNM1Q05193 864 aaKnown RBP6.53□□□□□ -1.36
HMGN3P1-201ENST00000453847 DGKZQ13574 1117 aa6.53□□□□□ -1.36
HMGN3P1-201ENST00000453847 L3MBTL2Q969R5 705 aa6.53□□□□□ -1.36
HMGN3P1-201ENST00000453847 IFT43Q96FT9 208 aa6.53□□□□□ -1.36
HMGN3P1-201ENST00000453847 MRGPRX2Q96LB1 330 aa6.53□□□□□ -1.36
HMGN3P1-201ENST00000453847 KLF16Q9BXK1 252 aaPredicted RBP6.53□□□□□ -1.36
HMGN3P1-201ENST00000453847 EIF4ENIF1Q9NRA8 985 aaKnown RBP6.53□□□□□ -1.36
HMGN3P1-201ENST00000453847 ADH1AP07327 375 aa6.52□□□□□ -1.37
HMGN3P1-201ENST00000453847 ZAP70P43403 619 aa6.52□□□□□ -1.37
HMGN3P1-201ENST00000453847 PSMD2Q13200 908 aa6.52□□□□□ -1.37
HMGN3P1-201ENST00000453847 CLN3Q13286 438 aa6.52□□□□□ -1.37
HMGN3P1-201ENST00000453847 ORC1Q13415 861 aa6.52□□□□□ -1.37
HMGN3P1-201ENST00000453847 RTN1Q16799 776 aa6.52□□□□□ -1.37
HMGN3P1-201ENST00000453847 UBXN4Q92575 508 aa6.52□□□□□ -1.37
HMGN3P1-201ENST00000453847 CSRNP1Q96S65 589 aa6.52□□□□□ -1.37
HMGN3P1-201ENST00000453847 METTL5Q9NRN9 209 aaKnown RBP6.52□□□□□ -1.37
HMGN3P1-201ENST00000453847 A6NHS1 94 aa6.51□□□□□ -1.37
HMGN3P1-201ENST00000453847 WNT7AO00755 349 aa6.51□□□□□ -1.37
HMGN3P1-201ENST00000453847 Q6ZVU0 165 aa6.51□□□□□ -1.37
HMGN3P1-201ENST00000453847 PPARGC1BQ86YN6 1023 aaKnown RBP6.51□□□□□ -1.37
HMGN3P1-201ENST00000453847 RNF34Q969K3 372 aa6.51□□□□□ -1.37
HMGN3P1-201ENST00000453847 PHACTR1Q9C0D0 580 aa6.51□□□□□ -1.37
HMGN3P1-201ENST00000453847 TGIF2Q9GZN2 237 aa6.51□□□□□ -1.37
HMGN3P1-201ENST00000453847 ACBD3Q9H3P7 528 aa6.51□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms