RNA–Protein interactions for RNA: ENST00000453447.6

SPIRE1-206, Transcript of spire type actin nucleation factor 1, humanhuman

TSL 5 BASIC

Gene SPIRE1, Length 2,107 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPIRE1-206ENST00000453447 PPIP5K1Q6PFW1 1433 aa8.59□□□□□ -1.03
SPIRE1-206ENST00000453447 HMGB1P09429 215 aaKnown RBP8.59□□□□□ -1.03
SPIRE1-206ENST00000453447 PKP1Q13835 747 aa8.59□□□□□ -1.03
SPIRE1-206ENST00000453447 ALDH1L2Q3SY69 923 aa8.59□□□□□ -1.03
SPIRE1-206ENST00000453447 RNF214Q8ND24 703 aa8.59□□□□□ -1.03
SPIRE1-206ENST00000453447 CARD14Q9BXL6 1004 aa8.59□□□□□ -1.03
SPIRE1-206ENST00000453447 BRD1O95696 1058 aa8.58□□□□□ -1.04
SPIRE1-206ENST00000453447 NCBP1Q09161 790 aaKnown RBP8.58□□□□□ -1.04
SPIRE1-206ENST00000453447 VPS72Q15906 364 aa8.58□□□□□ -1.04
SPIRE1-206ENST00000453447 SSH1Q8WYL5 1049 aa8.58□□□□□ -1.04
SPIRE1-206ENST00000453447 ZNF428Q96B54 188 aa8.58□□□□□ -1.04
SPIRE1-206ENST00000453447 USP26Q9BXU7 913 aa8.58□□□□□ -1.04
SPIRE1-206ENST00000453447 TERF2Q15554 542 aa8.57□□□□□ -1.04
SPIRE1-206ENST00000453447 TMEM87AQ8NBN3 555 aa8.57□□□□□ -1.04
SPIRE1-206ENST00000453447 CFAP53Q96M91 514 aa8.57□□□□□ -1.04
SPIRE1-206ENST00000453447 USP25Q9UHP3 1055 aa8.57□□□□□ -1.04
SPIRE1-206ENST00000453447 NSFL1CQ9UNZ2 370 aaKnown RBP8.57□□□□□ -1.04
SPIRE1-206ENST00000453447 RRP7AQ9Y3A4 280 aaKnown RBP8.57□□□□□ -1.04
SPIRE1-206ENST00000453447 SOS2Q07890 1332 aaPredicted RBP8.57□□□□□ -1.04
SPIRE1-206ENST00000453447 SMTNL1A8MU46 457 aa8.57□□□□□ -1.04
SPIRE1-206ENST00000453447 ADGRB3O60242 1522 aa8.57□□□□□ -1.04
SPIRE1-206ENST00000453447 ADCY9O60503 1353 aa8.57□□□□□ -1.04
SPIRE1-206ENST00000453447 ADCY5O95622 1261 aa8.57□□□□□ -1.04
SPIRE1-206ENST00000453447 NSD2O96028 1365 aa8.57□□□□□ -1.04
SPIRE1-206ENST00000453447 HSPA1AP0DMV8 641 aaKnown RBP8.57□□□□□ -1.04
SPIRE1-206ENST00000453447 HSPA1BP0DMV9 641 aaKnown RBP8.57□□□□□ -1.04
SPIRE1-206ENST00000453447 KCNJ4P48050 445 aa8.57□□□□□ -1.04
SPIRE1-206ENST00000453447 MCM2P49736 904 aa8.57□□□□□ -1.04
SPIRE1-206ENST00000453447 DDX17Q92841 729 aaKnown RBP8.57□□□□□ -1.04
SPIRE1-206ENST00000453447 VGLL3A8MV65 326 aa8.56□□□□□ -1.04
SPIRE1-206ENST00000453447 INTS3Q68E01 1043 aaKnown RBP8.56□□□□□ -1.04
SPIRE1-206ENST00000453447 TTC12Q9H892 705 aaPredicted RBP8.56□□□□□ -1.04
SPIRE1-206ENST00000453447 RNF216Q9NWF9 866 aaPredicted RBP8.56□□□□□ -1.04
SPIRE1-206ENST00000453447 FAM53CQ9NYF3 392 aa8.56□□□□□ -1.04
SPIRE1-206ENST00000453447 NOB1Q9ULX3 412 aaKnown RBP8.56□□□□□ -1.04
SPIRE1-206ENST00000453447 NEXMIFQ5QGS0 1516 aa8.56□□□□□ -1.04
SPIRE1-206ENST00000453447 NSD3Q9BZ95 1437 aa8.56□□□□□ -1.04
SPIRE1-206ENST00000453447 GOLGA6L6A8MZA4 724 aa8.56□□□□□ -1.04
SPIRE1-206ENST00000453447 KIF3CO14782 793 aa8.56□□□□□ -1.04
SPIRE1-206ENST00000453447 EXOSC9Q06265 439 aaKnown RBP8.56□□□□□ -1.04
SPIRE1-206ENST00000453447 NEUROD2Q15784 382 aa8.56□□□□□ -1.04
SPIRE1-206ENST00000453447 TMEM132AQ24JP5 1023 aa8.56□□□□□ -1.04
SPIRE1-206ENST00000453447 CCDC183Q5T5S1 534 aa8.56□□□□□ -1.04
SPIRE1-206ENST00000453447 ANKRD45Q5TZF3 282 aa8.56□□□□□ -1.04
SPIRE1-206ENST00000453447 KRT222Q8N1A0 295 aa8.56□□□□□ -1.04
SPIRE1-206ENST00000453447 ZGPATQ8N5A5 531 aaKnown RBP8.56□□□□□ -1.04
SPIRE1-206ENST00000453447 INTS4Q96HW7 963 aaKnown RBP8.56□□□□□ -1.04
SPIRE1-206ENST00000453447 KIF24Q5T7B8 1368 aa8.55□□□□□ -1.04
SPIRE1-206ENST00000453447 KDM4AO75164 1064 aa8.55□□□□□ -1.04
SPIRE1-206ENST00000453447 CUL4AQ13619 759 aa8.55□□□□□ -1.04
SPIRE1-206ENST00000453447 MORC1Q86VD1 984 aa8.55□□□□□ -1.04
SPIRE1-206ENST00000453447 KIF18AQ8NI77 898 aa8.55□□□□□ -1.04
SPIRE1-206ENST00000453447 ARHGAP45Q92619 1136 aa8.55□□□□□ -1.04
SPIRE1-206ENST00000453447 EFCAB6Q5THR3 1501 aa8.55□□□□□ -1.04
SPIRE1-206ENST00000453447 PIK3C2BO00750 1634 aa8.54□□□□□ -1.04
SPIRE1-206ENST00000453447 CCDC9Q9Y3X0 531 aaKnown RBP8.54□□□□□ -1.04
SPIRE1-206ENST00000453447 FAM177BA6PVY3 158 aa8.54□□□□□ -1.04
SPIRE1-206ENST00000453447 KIF3BO15066 747 aa8.54□□□□□ -1.04
SPIRE1-206ENST00000453447 REC8O95072 547 aa8.54□□□□□ -1.04
SPIRE1-206ENST00000453447 GSPT1P15170 499 aaKnown RBP8.54□□□□□ -1.04
SPIRE1-206ENST00000453447 IRX3P78415 501 aaPredicted RBP8.54□□□□□ -1.04
SPIRE1-206ENST00000453447 SLFNL1Q499Z3 407 aa8.54□□□□□ -1.04
SPIRE1-206ENST00000453447 TTC22Q5TAA0 569 aa8.54□□□□□ -1.04
SPIRE1-206ENST00000453447 CASC1Q6TDU7 716 aa8.54□□□□□ -1.04
SPIRE1-206ENST00000453447 KCNF1Q9H3M0 494 aa8.54□□□□□ -1.04
SPIRE1-206ENST00000453447 PAXBP1Q9Y5B6 917 aa8.54□□□□□ -1.04
SPIRE1-206ENST00000453447 LMTK2Q8IWU2 1503 aa8.53□□□□□ -1.04
SPIRE1-206ENST00000453447 APBA3O96018 575 aa8.53□□□□□ -1.04
SPIRE1-206ENST00000453447 TICAM2Q86XR7 235 aa8.53□□□□□ -1.04
SPIRE1-206ENST00000453447 C17orf53Q8N3J3 647 aaPredicted RBP8.53□□□□□ -1.04
SPIRE1-206ENST00000453447 YY1AP1Q9H869 796 aa8.53□□□□□ -1.04
SPIRE1-206ENST00000453447 PYCARDQ9ULZ3 195 aa8.53□□□□□ -1.04
SPIRE1-206ENST00000453447 IFT172Q9UG01 1749 aa8.53□□□□□ -1.04
SPIRE1-206ENST00000453447 NWD2Q9ULI1 1742 aa8.53□□□□□ -1.04
SPIRE1-206ENST00000453447 ZBTB7BO15156 539 aaPredicted RBP8.53□□□□□ -1.04
SPIRE1-206ENST00000453447 PLEKHM2Q8IWE5 1019 aa8.53□□□□□ -1.04
SPIRE1-206ENST00000453447 ZNF397Q8NF99 534 aaPredicted RBP8.53□□□□□ -1.04
SPIRE1-206ENST00000453447 TSR2Q969E8 191 aaKnown RBP8.53□□□□□ -1.04
SPIRE1-206ENST00000453447 IL17RAQ96F46 866 aa8.53□□□□□ -1.04
SPIRE1-206ENST00000453447 SGIP1Q9BQI5 828 aa8.53□□□□□ -1.04
SPIRE1-206ENST00000453447 EFCC1Q9HA90 598 aa8.53□□□□□ -1.04
SPIRE1-206ENST00000453447 KIF1BO60333 1816 aa8.52□□□□□ -1.05
SPIRE1-206ENST00000453447 NRXN1Q9ULB1 1477 aa8.52□□□□□ -1.05
SPIRE1-206ENST00000453447 IGSF3O75054 1194 aa8.52□□□□□ -1.05
SPIRE1-206ENST00000453447 MX1P20591 662 aa8.52□□□□□ -1.05
SPIRE1-206ENST00000453447 CNPY4Q8N129 248 aa8.52□□□□□ -1.05
SPIRE1-206ENST00000453447 COL3A1P02461 1466 aaPredicted RBP8.52□□□□□ -1.05
SPIRE1-206ENST00000453447 CAPN2P17655 700 aa8.51□□□□□ -1.05
SPIRE1-206ENST00000453447 FUCA2Q9BTY2 467 aa8.51□□□□□ -1.05
SPIRE1-206ENST00000453447 RTL1A6NKG5 1358 aa8.51□□□□□ -1.05
SPIRE1-206ENST00000453447 ABCC4O15439 1325 aa8.51□□□□□ -1.05
SPIRE1-206ENST00000453447 WDR33Q9C0J8 1336 aaKnown RBP8.51□□□□□ -1.05
SPIRE1-206ENST00000453447 GRIN3BO60391 1043 aa8.51□□□□□ -1.05
SPIRE1-206ENST00000453447 ZBTB7AO95365 584 aa8.51□□□□□ -1.05
SPIRE1-206ENST00000453447 TMX3Q96JJ7 454 aa8.51□□□□□ -1.05
SPIRE1-206ENST00000453447 RPAP1Q9BWH6 1393 aaPredicted RBP8.51□□□□□ -1.05
SPIRE1-206ENST00000453447 CDC42BPGQ6DT37 1551 aa8.5□□□□□ -1.05
SPIRE1-206ENST00000453447 PITPNM2Q9BZ72 1349 aa8.5□□□□□ -1.05
SPIRE1-206ENST00000453447 TMPOP42166 694 aaKnown RBP8.5□□□□□ -1.05
SPIRE1-206ENST00000453447 MTHFSP49914 203 aa8.5□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms