RNA–Protein interactions for RNA: ENST00000452067.1

NUCKS1P1-201, Transcript of nuclear casein kinase and cyclin dependent kinase substrate 1 pseudogene 1, humanhuman

BASIC

Gene NUCKS1P1, Length 703 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUCKS1P1-201ENST00000452067 KANK4Q5T7N3 995 aaPredicted RBP11.46□□□□□ -0.57
NUCKS1P1-201ENST00000452067 CCDC102BQ68D86 513 aa11.46□□□□□ -0.57
NUCKS1P1-201ENST00000452067 ZNF295-AS1Q8N0V1 137 aa11.46□□□□□ -0.57
NUCKS1P1-201ENST00000452067 IQSEC3Q9UPP2 1182 aaPredicted RBP11.46□□□□□ -0.57
NUCKS1P1-201ENST00000452067 A6NJY4 79 aa11.45□□□□□ -0.58
NUCKS1P1-201ENST00000452067 BACH1O14867 736 aa11.45□□□□□ -0.58
NUCKS1P1-201ENST00000452067 DKK1O94907 266 aa11.45□□□□□ -0.58
NUCKS1P1-201ENST00000452067 PHKA2P46019 1235 aa11.45□□□□□ -0.58
NUCKS1P1-201ENST00000452067 SIX5Q8N196 739 aa11.45□□□□□ -0.58
NUCKS1P1-201ENST00000452067 GPR161Q8N6U8 529 aaKnown RBP11.45□□□□□ -0.58
NUCKS1P1-201ENST00000452067 USP3Q9Y6I4 520 aa11.45□□□□□ -0.58
NUCKS1P1-201ENST00000452067 CDK2AP1O14519 115 aa11.44□□□□□ -0.58
NUCKS1P1-201ENST00000452067 EPHA4P54764 986 aa11.44□□□□□ -0.58
NUCKS1P1-201ENST00000452067 VWA5B2Q8N398 1253 aa11.44□□□□□ -0.58
NUCKS1P1-201ENST00000452067 ZNF594Q96JF6 807 aaPredicted RBP11.44□□□□□ -0.58
NUCKS1P1-201ENST00000452067 ABCA5Q8WWZ7 1642 aa11.44□□□□□ -0.58
NUCKS1P1-201ENST00000452067 WDR62O43379 1518 aa11.44□□□□□ -0.58
NUCKS1P1-201ENST00000452067 RASA1P20936 1047 aa11.43□□□□□ -0.58
NUCKS1P1-201ENST00000452067 GAS2L1Q99501 681 aaPredicted RBP11.43□□□□□ -0.58
NUCKS1P1-201ENST00000452067 CDC14CA4D256 554 aa11.42□□□□□ -0.58
NUCKS1P1-201ENST00000452067 SV2AQ7L0J3 742 aa11.42□□□□□ -0.58
NUCKS1P1-201ENST00000452067 C14orf37Q86TY3 774 aa11.42□□□□□ -0.58
NUCKS1P1-201ENST00000452067 TRIM22Q8IYM9 498 aa11.42□□□□□ -0.58
NUCKS1P1-201ENST00000452067 SCHIP1Q9P0W5 487 aaPredicted RBP11.42□□□□□ -0.58
NUCKS1P1-201ENST00000452067 RAD54L2Q9Y4B4 1467 aa11.42□□□□□ -0.58
NUCKS1P1-201ENST00000452067 TARBP1Q13395 1621 aaKnown RBP11.42□□□□□ -0.58
NUCKS1P1-201ENST00000452067 IGF1RP08069 1367 aa11.41□□□□□ -0.58
NUCKS1P1-201ENST00000452067 A0A1B0GTH6 734 aa11.41□□□□□ -0.58
NUCKS1P1-201ENST00000452067 F11P03951 625 aa11.41□□□□□ -0.58
NUCKS1P1-201ENST00000452067 FOXK2Q01167 660 aa11.41□□□□□ -0.58
NUCKS1P1-201ENST00000452067 CRTC2Q53ET0 693 aaPredicted RBP11.41□□□□□ -0.58
NUCKS1P1-201ENST00000452067 RIPOR1Q6ZS17 1223 aa11.41□□□□□ -0.58
NUCKS1P1-201ENST00000452067 ZNF837Q96EG3 531 aaPredicted RBP11.41□□□□□ -0.58
NUCKS1P1-201ENST00000452067 NIFKQ9BYG3 293 aaKnown RBP11.41□□□□□ -0.58
NUCKS1P1-201ENST00000452067 ERCC6Q03468 1493 aa11.4□□□□□ -0.58
NUCKS1P1-201ENST00000452067 PLA2G4AP47712 749 aa11.4□□□□□ -0.58
NUCKS1P1-201ENST00000452067 PTK7Q13308 1070 aa11.4□□□□□ -0.58
NUCKS1P1-201ENST00000452067 DBN1Q16643 649 aa11.4□□□□□ -0.58
NUCKS1P1-201ENST00000452067 TNS4Q8IZW8 715 aa11.4□□□□□ -0.58
NUCKS1P1-201ENST00000452067 GMCL1Q96IK5 515 aa11.4□□□□□ -0.58
NUCKS1P1-201ENST00000452067 VRTNQ9H8Y1 702 aa11.4□□□□□ -0.58
NUCKS1P1-201ENST00000452067 M0R2N6 131 aa11.39□□□□□ -0.59
NUCKS1P1-201ENST00000452067 CLIP1P30622 1438 aa11.39□□□□□ -0.59
NUCKS1P1-201ENST00000452067 LARP1Q6PKG0 1096 aaKnown RBP11.39□□□□□ -0.59
NUCKS1P1-201ENST00000452067 CARMIL1Q5VZK9 1371 aa11.39□□□□□ -0.59
NUCKS1P1-201ENST00000452067 THOC2Q8NI27 1593 aaKnown RBP11.38□□□□□ -0.59
NUCKS1P1-201ENST00000452067 ARID3CA6NKF2 412 aa11.38□□□□□ -0.59
NUCKS1P1-201ENST00000452067 FAM196BA6NMK8 535 aa11.38□□□□□ -0.59
NUCKS1P1-201ENST00000452067 SFI1A8K8P3 1242 aa11.38□□□□□ -0.59
NUCKS1P1-201ENST00000452067 MSX1P28360 303 aa11.38□□□□□ -0.59
NUCKS1P1-201ENST00000452067 KRT76Q01546 638 aa11.38□□□□□ -0.59
NUCKS1P1-201ENST00000452067 GPAMQ9HCL2 828 aa11.38□□□□□ -0.59
NUCKS1P1-201ENST00000452067 PBRM1Q86U86 1689 aa11.37□□□□□ -0.59
NUCKS1P1-201ENST00000452067 USP17L15C9J2P7 530 aa11.37□□□□□ -0.59
NUCKS1P1-201ENST00000452067 USP17L10C9JJH3 530 aa11.37□□□□□ -0.59
NUCKS1P1-201ENST00000452067 USP17L13C9JLJ4 530 aa11.37□□□□□ -0.59
NUCKS1P1-201ENST00000452067 USP17L12C9JPN9 530 aa11.37□□□□□ -0.59
NUCKS1P1-201ENST00000452067 USP17L11C9JVI0 530 aa11.37□□□□□ -0.59
NUCKS1P1-201ENST00000452067 USP17L21D6R901 530 aa11.37□□□□□ -0.59
NUCKS1P1-201ENST00000452067 USP17L18D6R9N7 530 aa11.37□□□□□ -0.59
NUCKS1P1-201ENST00000452067 USP17L22D6RA61 530 aa11.37□□□□□ -0.59
NUCKS1P1-201ENST00000452067 USP17L17D6RBQ6 530 aa11.37□□□□□ -0.59
NUCKS1P1-201ENST00000452067 USP17L19D6RCP7 530 aa11.37□□□□□ -0.59
NUCKS1P1-201ENST00000452067 USP17L20D6RJB6 530 aa11.37□□□□□ -0.59
NUCKS1P1-201ENST00000452067 H7C1W4 665 aa11.37□□□□□ -0.59
NUCKS1P1-201ENST00000452067 THBS1P07996 1170 aa11.37□□□□□ -0.59
NUCKS1P1-201ENST00000452067 USP17L24Q0WX57 530 aa11.37□□□□□ -0.59
NUCKS1P1-201ENST00000452067 GAPVD1Q14C86 1478 aa11.37□□□□□ -0.59
NUCKS1P1-201ENST00000452067 IFT140Q96RY7 1462 aa11.37□□□□□ -0.59
NUCKS1P1-201ENST00000452067 RFX1P22670 979 aa11.36□□□□□ -0.59
NUCKS1P1-201ENST00000452067 RNFT1Q5M7Z0 435 aa11.36□□□□□ -0.59
NUCKS1P1-201ENST00000452067 SLC9A9Q8IVB4 645 aa11.36□□□□□ -0.59
NUCKS1P1-201ENST00000452067 TSEN2Q8NCE0 465 aaKnown RBP11.36□□□□□ -0.59
NUCKS1P1-201ENST00000452067 COL25A1Q9BXS0 654 aaPredicted RBP11.36□□□□□ -0.59
NUCKS1P1-201ENST00000452067 RBM19Q9Y4C8 960 aaKnown RBP11.36□□□□□ -0.59
NUCKS1P1-201ENST00000452067 CTTNBP2Q8WZ74 1663 aa11.36□□□□□ -0.59
NUCKS1P1-201ENST00000452067 ATP4AP20648 1035 aa11.35□□□□□ -0.59
NUCKS1P1-201ENST00000452067 SEC13P55735 322 aa11.35□□□□□ -0.59
NUCKS1P1-201ENST00000452067 ZDHHC1Q8WTX9 485 aa11.35□□□□□ -0.59
NUCKS1P1-201ENST00000452067 NUCKS1Q9H1E3 243 aaKnown RBP11.35□□□□□ -0.59
NUCKS1P1-201ENST00000452067 CABP1Q9NZU7 370 aa11.35□□□□□ -0.59
NUCKS1P1-201ENST00000452067 LORP23490 312 aaPredicted RBP11.34□□□□□ -0.59
NUCKS1P1-201ENST00000452067 DPYDQ12882 1025 aa11.34□□□□□ -0.59
NUCKS1P1-201ENST00000452067 TBCELQ5QJ74 424 aa11.34□□□□□ -0.59
NUCKS1P1-201ENST00000452067 ANKMY2Q8IV38 441 aa11.34□□□□□ -0.59
NUCKS1P1-201ENST00000452067 TSPAN10Q9H1Z9 355 aaPredicted RBP11.34□□□□□ -0.59
NUCKS1P1-201ENST00000452067 RUBCNLQ9H714 662 aa11.34□□□□□ -0.59
NUCKS1P1-201ENST00000452067 SRPK2P78362 688 aaKnown RBP11.33□□□□□ -0.6
NUCKS1P1-201ENST00000452067 INSM1Q01101 510 aaPredicted RBP11.33□□□□□ -0.6
NUCKS1P1-201ENST00000452067 TRIM26Q12899 539 aaPredicted RBP11.33□□□□□ -0.6
NUCKS1P1-201ENST00000452067 GAS6Q14393 721 aa11.33□□□□□ -0.6
NUCKS1P1-201ENST00000452067 TEAD4Q15561 434 aa11.33□□□□□ -0.6
NUCKS1P1-201ENST00000452067 CDCA8Q53HL2 280 aa11.33□□□□□ -0.6
NUCKS1P1-201ENST00000452067 C1orf216Q8TAB5 229 aa11.33□□□□□ -0.6
NUCKS1P1-201ENST00000452067 GTPBP3Q969Y2 492 aaKnown RBP11.33□□□□□ -0.6
NUCKS1P1-201ENST00000452067 ARXQ96QS3 562 aa11.33□□□□□ -0.6
NUCKS1P1-201ENST00000452067 PARP3Q9Y6F1 533 aa11.33□□□□□ -0.6
NUCKS1P1-201ENST00000452067 VPS8Q8N3P4 1428 aa11.33□□□□□ -0.6
NUCKS1P1-201ENST00000452067 AIDAQ96BJ3 306 aa11.32□□□□□ -0.6
NUCKS1P1-201ENST00000452067 CCDC97Q96F63 343 aaPredicted RBP11.32□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 41.2 ms