RNA–Protein interactions for RNA: ENST00000449537.1

AC004540.1-204, humanhuman

TSL 2 BASIC

Gene AC004540.1, Length 727 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC004540.1-204ENST00000449537 ZPR1O75312 459 aa17.68■□□□□ 0.42
AC004540.1-204ENST00000449537 ITGBL1O95965 494 aaPredicted RBP17.68■□□□□ 0.42
AC004540.1-204ENST00000449537 C2CD5Q86YS7 1000 aa17.68■□□□□ 0.42
AC004540.1-204ENST00000449537 ZNF831Q5JPB2 1677 aa17.67■□□□□ 0.42
AC004540.1-204ENST00000449537 IQCA1LA6NCM1 817 aa17.67■□□□□ 0.42
AC004540.1-204ENST00000449537 RASSF10A6NK89 507 aa17.67■□□□□ 0.42
AC004540.1-204ENST00000449537 WDR33Q9C0J8 1336 aaKnown RBP17.67■□□□□ 0.42
AC004540.1-204ENST00000449537 TONSLQ96HA7 1378 aa17.66■□□□□ 0.42
AC004540.1-204ENST00000449537 BEGAINQ9BUH8 593 aa17.66■□□□□ 0.42
AC004540.1-204ENST00000449537 COL5A3P25940 1745 aaPredicted RBP17.66■□□□□ 0.42
AC004540.1-204ENST00000449537 PTCD1O75127 700 aaKnown RBP17.65■□□□□ 0.42
AC004540.1-204ENST00000449537 USPL1Q5W0Q7 1092 aa17.65■□□□□ 0.42
AC004540.1-204ENST00000449537 EYA1Q99502 592 aa17.65■□□□□ 0.42
AC004540.1-204ENST00000449537 PPM1GO15355 546 aaPredicted RBP17.64■□□□□ 0.41
AC004540.1-204ENST00000449537 CABP4P57796 275 aa17.64■□□□□ 0.41
AC004540.1-204ENST00000449537 NFIXQ14938 502 aa17.64■□□□□ 0.41
AC004540.1-204ENST00000449537 TAF1DQ9H5J8 278 aaPredicted RBP17.64■□□□□ 0.41
AC004540.1-204ENST00000449537 CLEC11AQ9Y240 323 aa17.64■□□□□ 0.41
AC004540.1-204ENST00000449537 NCAPD2Q15021 1401 aa17.64■□□□□ 0.41
AC004540.1-204ENST00000449537 C21orf2O43822 256 aa17.63■□□□□ 0.41
AC004540.1-204ENST00000449537 SERPINB2P05120 415 aa17.63■□□□□ 0.41
AC004540.1-204ENST00000449537 HSP90AB1P08238 724 aaKnown RBP17.63■□□□□ 0.41
AC004540.1-204ENST00000449537 SIN3AQ96ST3 1273 aa17.63■□□□□ 0.41
AC004540.1-204ENST00000449537 EMILIN1Q9Y6C2 1016 aa17.63■□□□□ 0.41
AC004540.1-204ENST00000449537 ZNF219Q9P2Y4 722 aaPredicted RBP17.62■□□□□ 0.41
AC004540.1-204ENST00000449537 PDE4DIPQ5VU43 2346 aa17.62■□□□□ 0.41
AC004540.1-204ENST00000449537 DICER1Q9UPY3 1922 aaKnown RBP17.62■□□□□ 0.41
AC004540.1-204ENST00000449537 NEUROD1Q13562 356 aa17.61■□□□□ 0.41
AC004540.1-204ENST00000449537 EAPPQ56P03 285 aaPredicted RBP17.61■□□□□ 0.41
AC004540.1-204ENST00000449537 INTS5Q6P9B9 1019 aaKnown RBP17.61■□□□□ 0.41
AC004540.1-204ENST00000449537 ZNF622Q969S3 477 aaKnown RBP eCLIP17.61■□□□□ 0.41
AC004540.1-204ENST00000449537 ABT1Q9ULW3 272 aaKnown RBP17.61■□□□□ 0.41
AC004540.1-204ENST00000449537 L3MBTL3Q96JM7 780 aaPredicted RBP17.6■□□□□ 0.41
AC004540.1-204ENST00000449537 TAOK3Q9H2K8 898 aa17.6■□□□□ 0.41
AC004540.1-204ENST00000449537 CNTROBQ8N137 903 aa17.59■□□□□ 0.41
AC004540.1-204ENST00000449537 WASHC2AQ641Q2 1341 aa17.58■□□□□ 0.4
AC004540.1-204ENST00000449537 LTBP3Q9NS15 1303 aa17.58■□□□□ 0.4
AC004540.1-204ENST00000449537 SLC24A1O60721 1099 aa17.58■□□□□ 0.4
AC004540.1-204ENST00000449537 MCOLN1Q9GZU1 580 aa17.58■□□□□ 0.4
AC004540.1-204ENST00000449537 NARFQ9UHQ1 456 aa17.58■□□□□ 0.4
AC004540.1-204ENST00000449537 PDZRN3Q9UPQ7 1066 aa17.58■□□□□ 0.4
AC004540.1-204ENST00000449537 AFDNP55196 1824 aaKnown RBP17.58■□□□□ 0.4
AC004540.1-204ENST00000449537 DLEC1Q9Y238 1755 aa17.58■□□□□ 0.4
AC004540.1-204ENST00000449537 ECE1P42892 770 aa17.57■□□□□ 0.4
AC004540.1-204ENST00000449537 GPR101Q96P66 508 aaPredicted RBP17.57■□□□□ 0.4
AC004540.1-204ENST00000449537 PAXIP1Q6ZW49 1069 aaPredicted RBP17.56■□□□□ 0.4
AC004540.1-204ENST00000449537 CAPNS2Q96L46 248 aa17.56■□□□□ 0.4
AC004540.1-204ENST00000449537 TESK2Q96S53 571 aa17.56■□□□□ 0.4
AC004540.1-204ENST00000449537 HACL1Q9UJ83 578 aa17.56■□□□□ 0.4
AC004540.1-204ENST00000449537 SCN4AP35499 1836 aa17.56■□□□□ 0.4
AC004540.1-204ENST00000449537 PDE6BP35913 854 aa17.55■□□□□ 0.4
AC004540.1-204ENST00000449537 PLEKHO1Q53GL0 409 aaPredicted RBP17.55■□□□□ 0.4
AC004540.1-204ENST00000449537 MAP1SQ66K74 1059 aaPredicted RBP17.55■□□□□ 0.4
AC004540.1-204ENST00000449537 PNMA8AQ86V59 439 aaPredicted RBP17.55■□□□□ 0.4
AC004540.1-204ENST00000449537 NFATC2IPQ8NCF5 419 aa17.55■□□□□ 0.4
AC004540.1-204ENST00000449537 TSKSQ9UJT2 592 aa17.55■□□□□ 0.4
AC004540.1-204ENST00000449537 FER1L6Q2WGJ9 1857 aa17.54■□□□□ 0.4
AC004540.1-204ENST00000449537 SOS1Q07889 1333 aaPredicted RBP17.54■□□□□ 0.4
AC004540.1-204ENST00000449537 ST20-MTHFSA0A0A6YYL1 179 aa17.54■□□□□ 0.4
AC004540.1-204ENST00000449537 EPHX2P34913 555 aa17.54■□□□□ 0.4
AC004540.1-204ENST00000449537 MTHFSP49914 203 aa17.54■□□□□ 0.4
AC004540.1-204ENST00000449537 NRXN2Q9P2S2 1712 aa17.53■□□□□ 0.4
AC004540.1-204ENST00000449537 GRM1Q13255 1194 aa17.53■□□□□ 0.4
AC004540.1-204ENST00000449537 DNAJC10Q8IXB1 793 aa17.53■□□□□ 0.4
AC004540.1-204ENST00000449537 BRIP1Q9BX63 1249 aa17.53■□□□□ 0.4
AC004540.1-204ENST00000449537 BCL2L12Q9HB09 334 aa17.53■□□□□ 0.4
AC004540.1-204ENST00000449537 TNRC18O15417 2968 aaPredicted RBP17.52■□□□□ 0.4
AC004540.1-204ENST00000449537 SOGA3Q5TF21 947 aa17.52■□□□□ 0.4
AC004540.1-204ENST00000449537 ZNF530Q6P9A1 599 aaPredicted RBP17.52■□□□□ 0.4
AC004540.1-204ENST00000449537 BICDL1Q6ZP65 573 aa17.52■□□□□ 0.4
AC004540.1-204ENST00000449537 DDX21Q9NR30 783 aaKnown RBP eCLIP17.52■□□□□ 0.4
AC004540.1-204ENST00000449537 CARMIL3Q8ND23 1372 aa17.52■□□□□ 0.39
AC004540.1-204ENST00000449537 ADAMTS7Q9UKP4 1686 aa17.52■□□□□ 0.39
AC004540.1-204ENST00000449537 DGKZQ13574 1117 aa17.51■□□□□ 0.39
AC004540.1-204ENST00000449537 CYP4F22Q6NT55 531 aa17.51■□□□□ 0.39
AC004540.1-204ENST00000449537 CNKSR1Q969H4 720 aa17.51■□□□□ 0.39
AC004540.1-204ENST00000449537 CA12O43570 354 aa17.5■□□□□ 0.39
AC004540.1-204ENST00000449537 MAP2K2P36507 400 aa17.5■□□□□ 0.39
AC004540.1-204ENST00000449537 CYP19A1P11511 503 aaPredicted RBP17.49■□□□□ 0.39
AC004540.1-204ENST00000449537 AMOTQ4VCS5 1084 aa17.49■□□□□ 0.39
AC004540.1-204ENST00000449537 PRPF38BQ5VTL8 546 aaKnown RBP17.49■□□□□ 0.39
AC004540.1-204ENST00000449537 CASP8AP2Q9UKL3 1982 aa17.48■□□□□ 0.39
AC004540.1-204ENST00000449537 EIF4A2Q14240 407 aaKnown RBP17.48■□□□□ 0.39
AC004540.1-204ENST00000449537 C1orf141Q5JVX7 400 aa17.48■□□□□ 0.39
AC004540.1-204ENST00000449537 COL15A1P39059 1388 aa17.48■□□□□ 0.39
AC004540.1-204ENST00000449537 CCDC24Q8N4L8 307 aa17.47■□□□□ 0.39
AC004540.1-204ENST00000449537 TJP1Q07157 1748 aa17.47■□□□□ 0.39
AC004540.1-204ENST00000449537 AOC2O75106 756 aa17.46■□□□□ 0.39
AC004540.1-204ENST00000449537 STYK1Q6J9G0 422 aa17.46■□□□□ 0.39
AC004540.1-204ENST00000449537 PRPF40BQ6NWY9 871 aaKnown RBP17.46■□□□□ 0.39
AC004540.1-204ENST00000449537 POLKQ9UBT6 870 aa17.46■□□□□ 0.39
AC004540.1-204ENST00000449537 KIF20BQ96Q89 1820 aa17.46■□□□□ 0.39
AC004540.1-204ENST00000449537 ZNF541Q9H0D2 1346 aa17.46■□□□□ 0.38
AC004540.1-204ENST00000449537 PRR5LQ6MZQ0 368 aa17.45■□□□□ 0.38
AC004540.1-204ENST00000449537 ZBTB1Q9Y2K1 713 aa17.45■□□□□ 0.38
AC004540.1-204ENST00000449537 ADAMTSL1Q8N6G6 1762 aa17.45■□□□□ 0.38
AC004540.1-204ENST00000449537 RNF123Q5XPI4 1314 aa17.45■□□□□ 0.38
AC004540.1-204ENST00000449537 TBC1D9BQ66K14 1250 aa17.44■□□□□ 0.38
AC004540.1-204ENST00000449537 CARD14Q9BXL6 1004 aa17.44■□□□□ 0.38
AC004540.1-204ENST00000449537 SLX4Q8IY92 1834 aa17.44■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 42.5 ms