RNA–Protein interactions for RNA: ENST00000449502.5

RFC4-210, Transcript of replication factor C subunit 4, humanhuman

TSL 3

Gene RFC4, Length 799 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC4-210ENST00000449502 AIMP1Q12904 312 aaKnown RBP12.19□□□□□ -0.46
RFC4-210ENST00000449502 ZNF772Q68DY9 489 aaPredicted RBP12.19□□□□□ -0.46
RFC4-210ENST00000449502 NPM2Q86SE8 214 aaKnown RBP12.19□□□□□ -0.46
RFC4-210ENST00000449502 VSIG10Q8N0Z9 540 aa12.19□□□□□ -0.46
RFC4-210ENST00000449502 SMARCC1Q92922 1105 aaPredicted RBP12.19□□□□□ -0.46
RFC4-210ENST00000449502 ZBTB40Q9NUA8 1239 aa12.19□□□□□ -0.46
RFC4-210ENST00000449502 ASAP1Q9ULH1 1129 aa12.19□□□□□ -0.46
RFC4-210ENST00000449502 USP16Q9Y5T5 823 aa12.19□□□□□ -0.46
RFC4-210ENST00000449502 NWD2Q9ULI1 1742 aa12.19□□□□□ -0.46
RFC4-210ENST00000449502 RIC3Q7Z5B4 369 aa12.18□□□□□ -0.46
RFC4-210ENST00000449502 DNAAF4Q8WXU2 420 aa12.18□□□□□ -0.46
RFC4-210ENST00000449502 NRAPQ86VF7 1730 aa12.17□□□□□ -0.46
RFC4-210ENST00000449502 ADAMTS7Q9UKP4 1686 aa12.17□□□□□ -0.46
RFC4-210ENST00000449502 PI4KAP2A4QPH2 592 aa12.17□□□□□ -0.46
RFC4-210ENST00000449502 GNAI3P08754 354 aa12.17□□□□□ -0.46
RFC4-210ENST00000449502 NEXNQ0ZGT2 675 aa12.17□□□□□ -0.46
RFC4-210ENST00000449502 PROSER3Q2NL68 480 aa12.17□□□□□ -0.46
RFC4-210ENST00000449502 KSR2Q6VAB6 950 aa12.17□□□□□ -0.46
RFC4-210ENST00000449502 SEPT12Q8IYM1 358 aa12.17□□□□□ -0.46
RFC4-210ENST00000449502 PI4KAP1Q8N8J0 262 aa12.17□□□□□ -0.46
RFC4-210ENST00000449502 SRCIN1Q9C0H9 1055 aa12.17□□□□□ -0.46
RFC4-210ENST00000449502 HDAC5Q9UQL6 1122 aa12.17□□□□□ -0.46
RFC4-210ENST00000449502 PCDHB15Q9Y5E8 787 aa12.17□□□□□ -0.46
RFC4-210ENST00000449502 ATRNO75882 1429 aa12.17□□□□□ -0.46
RFC4-210ENST00000449502 COPS6Q7L5N1 327 aa12.16□□□□□ -0.46
RFC4-210ENST00000449502 XAGE3Q8WTP9 111 aa12.16□□□□□ -0.46
RFC4-210ENST00000449502 MAP3K2Q9Y2U5 619 aa12.16□□□□□ -0.46
RFC4-210ENST00000449502 BCL9O00512 1426 aa12.16□□□□□ -0.46
RFC4-210ENST00000449502 GNAI2P04899 355 aa12.15□□□□□ -0.46
RFC4-210ENST00000449502 HDAC1Q13547 482 aaPredicted RBP12.15□□□□□ -0.46
RFC4-210ENST00000449502 ANKRD13DQ6ZTN6 518 aa12.15□□□□□ -0.46
RFC4-210ENST00000449502 DNAJC10Q8IXB1 793 aa12.15□□□□□ -0.46
RFC4-210ENST00000449502 FBXO41Q8TF61 875 aa12.15□□□□□ -0.46
RFC4-210ENST00000449502 ZBTB47Q9UFB7 747 aaPredicted RBP12.15□□□□□ -0.46
RFC4-210ENST00000449502 RGS12O14924 1447 aa12.14□□□□□ -0.47
RFC4-210ENST00000449502 HMMRO75330 724 aa12.14□□□□□ -0.47
RFC4-210ENST00000449502 ALDH1L1O75891 902 aa12.14□□□□□ -0.47
RFC4-210ENST00000449502 IGHDP01880 384 aa12.14□□□□□ -0.47
RFC4-210ENST00000449502 UBTFL1P0CB47 393 aaPredicted RBP12.14□□□□□ -0.47
RFC4-210ENST00000449502 PDIA6Q15084 440 aa12.14□□□□□ -0.47
RFC4-210ENST00000449502 ARXQ96QS3 562 aa12.14□□□□□ -0.47
RFC4-210ENST00000449502 C1orf115Q9H7X2 142 aa12.14□□□□□ -0.47
RFC4-210ENST00000449502 ZNF330Q9Y3S2 320 aaPredicted RBP12.14□□□□□ -0.47
RFC4-210ENST00000449502 KDM3BQ7LBC6 1761 aa12.14□□□□□ -0.47
RFC4-210ENST00000449502 KDM2BQ8NHM5 1336 aa12.13□□□□□ -0.47
RFC4-210ENST00000449502 SCN11AQ9UI33 1791 aa12.13□□□□□ -0.47
RFC4-210ENST00000449502 ONECUT3O60422 494 aaPredicted RBP12.13□□□□□ -0.47
RFC4-210ENST00000449502 A1BGP04217 495 aa12.13□□□□□ -0.47
RFC4-210ENST00000449502 PIP4K2AP48426 406 aaPredicted RBP12.13□□□□□ -0.47
RFC4-210ENST00000449502 KIF6Q6ZMV9 814 aa12.13□□□□□ -0.47
RFC4-210ENST00000449502 RPAP2Q8IXW5 612 aaPredicted RBP12.13□□□□□ -0.47
RFC4-210ENST00000449502 MEIS3Q99687 375 aa12.13□□□□□ -0.47
RFC4-210ENST00000449502 C9orf78Q9NZ63 289 aaPredicted RBP12.13□□□□□ -0.47
RFC4-210ENST00000449502 ATP6V1AP38606 617 aa12.12□□□□□ -0.47
RFC4-210ENST00000449502 RBM6P78332 1123 aaKnown RBP12.12□□□□□ -0.47
RFC4-210ENST00000449502 BEND3Q5T5X7 828 aa12.12□□□□□ -0.47
RFC4-210ENST00000449502 LINS1Q8NG48 757 aa12.12□□□□□ -0.47
RFC4-210ENST00000449502 PLBD2Q8NHP8 589 aa12.12□□□□□ -0.47
RFC4-210ENST00000449502 PXDNLA1KZ92 1463 aa12.12□□□□□ -0.47
RFC4-210ENST00000449502 PALLDQ8WX93 1383 aa12.11□□□□□ -0.47
RFC4-210ENST00000449502 LOC102724428A0A0B4J2F2 783 aa12.11□□□□□ -0.47
RFC4-210ENST00000449502 KCNQ2O43526 872 aa12.11□□□□□ -0.47
RFC4-210ENST00000449502 SIK1P57059 783 aa12.11□□□□□ -0.47
RFC4-210ENST00000449502 MYD88Q99836 296 aa12.11□□□□□ -0.47
RFC4-210ENST00000449502 METTL22Q9BUU2 404 aaPredicted RBP12.11□□□□□ -0.47
RFC4-210ENST00000449502 KCPQ6ZWJ8 1503 aa12.11□□□□□ -0.47
RFC4-210ENST00000449502 ADCY9O60503 1353 aa12.1□□□□□ -0.47
RFC4-210ENST00000449502 NBPF26B4DH59 902 aa12.1□□□□□ -0.47
RFC4-210ENST00000449502 CYP19A1P11511 503 aaPredicted RBP12.1□□□□□ -0.47
RFC4-210ENST00000449502 RXRBP28702 533 aa12.1□□□□□ -0.47
RFC4-210ENST00000449502 NBPF14Q5TI25 921 aa12.1□□□□□ -0.47
RFC4-210ENST00000449502 NBPF10Q6P3W6 841 aaKnown RBP12.1□□□□□ -0.47
RFC4-210ENST00000449502 FAM196AQ6ZSG2 479 aa12.1□□□□□ -0.47
RFC4-210ENST00000449502 KRT27Q7Z3Y8 459 aa12.1□□□□□ -0.47
RFC4-210ENST00000449502 NBPF15Q8N660 670 aa12.1□□□□□ -0.47
RFC4-210ENST00000449502 ANKRD44Q8N8A2 993 aa12.1□□□□□ -0.47
RFC4-210ENST00000449502 GCC1Q96CN9 775 aa12.1□□□□□ -0.47
RFC4-210ENST00000449502 ATP10DQ9P241 1426 aa12.1□□□□□ -0.47
RFC4-210ENST00000449502 CEP85Q6P2H3 762 aa12.09□□□□□ -0.47
RFC4-210ENST00000449502 SIPA1L3O60292 1781 aaPredicted RBP12.08□□□□□ -0.48
RFC4-210ENST00000449502 GRM8O00222 908 aa12.08□□□□□ -0.48
RFC4-210ENST00000449502 RGS3P49796 1198 aa12.08□□□□□ -0.48
RFC4-210ENST00000449502 HSP90AB3PQ58FF7 597 aa12.08□□□□□ -0.48
RFC4-210ENST00000449502 FAM182BQ5T319 152 aa12.08□□□□□ -0.48
RFC4-210ENST00000449502 USP44Q9H0E7 712 aa12.08□□□□□ -0.48
RFC4-210ENST00000449502 CCDC87Q9NVE4 849 aa12.08□□□□□ -0.48
RFC4-210ENST00000449502 LRRFIP2Q9Y608 721 aaKnown RBP12.08□□□□□ -0.48
RFC4-210ENST00000449502 SHANK3Q9BYB0 1731 aa12.08□□□□□ -0.48
RFC4-210ENST00000449502 TNKS1BP1Q9C0C2 1729 aaKnown RBP12.08□□□□□ -0.48
RFC4-210ENST00000449502 HMGB2P26583 209 aaKnown RBP12.07□□□□□ -0.48
RFC4-210ENST00000449502 IL6STP40189 918 aaPredicted RBP12.07□□□□□ -0.48
RFC4-210ENST00000449502 CWF19L2Q2TBE0 894 aaKnown RBP12.07□□□□□ -0.48
RFC4-210ENST00000449502 TTLL7Q6ZT98 887 aa12.07□□□□□ -0.48
RFC4-210ENST00000449502 LRP10Q7Z4F1 713 aa12.07□□□□□ -0.48
RFC4-210ENST00000449502 ZBTB3Q9H5J0 574 aa12.07□□□□□ -0.48
RFC4-210ENST00000449502 PDZRN3Q9UPQ7 1066 aa12.07□□□□□ -0.48
RFC4-210ENST00000449502 A0A087WZG4 1122 aa12.06□□□□□ -0.48
RFC4-210ENST00000449502 NEURL1BA8MQ27 555 aa12.06□□□□□ -0.48
RFC4-210ENST00000449502 ATP5J2-PTCD1G3V325 749 aa12.06□□□□□ -0.48
RFC4-210ENST00000449502 CRKLP46109 303 aaKnown RBP12.06□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 75.6 ms