RNA–Protein interactions for RNA: ENST00000448190.6

SNHG4-201, Transcript of small nucleolar RNA host gene 4, humanhuman

TSL 4

Gene SNHG4, Length 542 nt, Biotype processed transcript, Subcellular localisation Nucleoplasm .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG4-201ENST00000448190 CCER2I3L3R5 266 aa17.47■□□□□ 0.39
SNHG4-201ENST00000448190 CHL1O00533 1208 aa17.47■□□□□ 0.39
SNHG4-201ENST00000448190 KRT24Q2M2I5 525 aa17.47■□□□□ 0.39
SNHG4-201ENST00000448190 SRP68Q9UHB9 627 aaKnown RBP17.47■□□□□ 0.39
SNHG4-201ENST00000448190 GIGYF1O75420 1035 aaPredicted RBP17.46■□□□□ 0.39
SNHG4-201ENST00000448190 WWC1Q8IX03 1113 aa17.45■□□□□ 0.38
SNHG4-201ENST00000448190 NECTIN2Q92692 538 aa17.45■□□□□ 0.38
SNHG4-201ENST00000448190 C4BP0C0L5 1744 aa17.44■□□□□ 0.38
SNHG4-201ENST00000448190 EIF2S2P20042 333 aaKnown RBP17.44■□□□□ 0.38
SNHG4-201ENST00000448190 CFAP44Q96MT7 982 aa17.44■□□□□ 0.38
SNHG4-201ENST00000448190 SGIP1Q9BQI5 828 aa17.44■□□□□ 0.38
SNHG4-201ENST00000448190 MBIPQ9NS73 344 aa17.44■□□□□ 0.38
SNHG4-201ENST00000448190 SOS1Q07889 1333 aaPredicted RBP17.44■□□□□ 0.38
SNHG4-201ENST00000448190 ADRA2BP18089 450 aa17.43■□□□□ 0.38
SNHG4-201ENST00000448190 POLD1P28340 1107 aa17.43■□□□□ 0.38
SNHG4-201ENST00000448190 KLHL34Q8N239 644 aa17.43■□□□□ 0.38
SNHG4-201ENST00000448190 NGEFQ8N5V2 710 aa17.43■□□□□ 0.38
SNHG4-201ENST00000448190 BABAM1Q9NWV8 329 aa17.43■□□□□ 0.38
SNHG4-201ENST00000448190 TBC1D2BQ9UPU7 963 aa17.43■□□□□ 0.38
SNHG4-201ENST00000448190 NBPF26B4DH59 902 aa17.42■□□□□ 0.38
SNHG4-201ENST00000448190 ELL2O00472 640 aaPredicted RBP17.42■□□□□ 0.38
SNHG4-201ENST00000448190 ZNF853P0CG23 659 aa17.42■□□□□ 0.38
SNHG4-201ENST00000448190 EIF5P55010 431 aaKnown RBP17.42■□□□□ 0.38
SNHG4-201ENST00000448190 USPL1Q5W0Q7 1092 aa17.42■□□□□ 0.38
SNHG4-201ENST00000448190 NBPF10Q6P3W6 841 aaKnown RBP17.42■□□□□ 0.38
SNHG4-201ENST00000448190 NBPF15Q8N660 670 aa17.42■□□□□ 0.38
SNHG4-201ENST00000448190 ZPR1O75312 459 aa17.41■□□□□ 0.38
SNHG4-201ENST00000448190 GYS1P13807 737 aa17.41■□□□□ 0.38
SNHG4-201ENST00000448190 GNAI1P63096 354 aa17.41■□□□□ 0.38
SNHG4-201ENST00000448190 CALD1Q05682 793 aaKnown RBP17.41■□□□□ 0.38
SNHG4-201ENST00000448190 TSR2Q969E8 191 aaKnown RBP17.41■□□□□ 0.38
SNHG4-201ENST00000448190 IFT57Q9NWB7 429 aa17.41■□□□□ 0.38
SNHG4-201ENST00000448190 C5P01031 1676 aa17.41■□□□□ 0.38
SNHG4-201ENST00000448190 MYL6BP14649 208 aa17.4■□□□□ 0.38
SNHG4-201ENST00000448190 FKBP8Q14318 412 aa17.4■□□□□ 0.38
SNHG4-201ENST00000448190 CCDC27Q2M243 656 aa17.4■□□□□ 0.38
SNHG4-201ENST00000448190 NPM2Q86SE8 214 aaKnown RBP17.4■□□□□ 0.38
SNHG4-201ENST00000448190 IL6STP40189 918 aaPredicted RBP17.39■□□□□ 0.37
SNHG4-201ENST00000448190 NLGN1Q8N2Q7 840 aa17.39■□□□□ 0.37
SNHG4-201ENST00000448190 ANXA1P04083 346 aa17.38■□□□□ 0.37
SNHG4-201ENST00000448190 MMP10P09238 476 aa17.38■□□□□ 0.37
SNHG4-201ENST00000448190 C8orf58Q8NAV2 365 aa17.38■□□□□ 0.37
SNHG4-201ENST00000448190 FHDC1Q9C0D6 1143 aaPredicted RBP17.38■□□□□ 0.37
SNHG4-201ENST00000448190 NARFQ9UHQ1 456 aa17.38■□□□□ 0.37
SNHG4-201ENST00000448190 USP42Q9H9J4 1324 aaKnown RBP17.38■□□□□ 0.37
SNHG4-201ENST00000448190 COL15A1P39059 1388 aa17.38■□□□□ 0.37
SNHG4-201ENST00000448190 A0A087WZG4 1122 aa17.37■□□□□ 0.37
SNHG4-201ENST00000448190 DUSP27Q5VZP5 1158 aa17.37■□□□□ 0.37
SNHG4-201ENST00000448190 BICDL1Q6ZP65 573 aa17.37■□□□□ 0.37
SNHG4-201ENST00000448190 SPINK5Q9NQ38 1064 aaPredicted RBP17.37■□□□□ 0.37
SNHG4-201ENST00000448190 CASZ1Q86V15 1759 aa17.37■□□□□ 0.37
SNHG4-201ENST00000448190 DLG5Q8TDM6 1919 aa17.37■□□□□ 0.37
SNHG4-201ENST00000448190 TJP1Q07157 1748 aa17.36■□□□□ 0.37
SNHG4-201ENST00000448190 SIPA1L3O60292 1781 aaPredicted RBP17.36■□□□□ 0.37
SNHG4-201ENST00000448190 PROSER3Q2NL68 480 aa17.36■□□□□ 0.37
SNHG4-201ENST00000448190 DZIP3Q86Y13 1208 aaKnown RBP17.36■□□□□ 0.37
SNHG4-201ENST00000448190 BCL2L12Q9HB09 334 aa17.36■□□□□ 0.37
SNHG4-201ENST00000448190 TAF1LQ8IZX4 1826 aa17.35■□□□□ 0.37
SNHG4-201ENST00000448190 NCBP3Q53F19 620 aaKnown RBP17.35■□□□□ 0.37
SNHG4-201ENST00000448190 WDR63Q8IWG1 891 aa17.35■□□□□ 0.37
SNHG4-201ENST00000448190 TSPYL6Q8N831 410 aa17.35■□□□□ 0.37
SNHG4-201ENST00000448190 PDIA6Q15084 440 aa17.34■□□□□ 0.37
SNHG4-201ENST00000448190 TTLL7Q6ZT98 887 aa17.34■□□□□ 0.37
SNHG4-201ENST00000448190 SYT17Q9BSW7 474 aa17.34■□□□□ 0.37
SNHG4-201ENST00000448190 MYH14Q7Z406 1995 aaKnown RBP17.33■□□□□ 0.37
SNHG4-201ENST00000448190 CAMTA2O94983 1202 aa17.33■□□□□ 0.36
SNHG4-201ENST00000448190 TM4SF1P30408 202 aa17.33■□□□□ 0.36
SNHG4-201ENST00000448190 HDGFL1Q5TGJ6 251 aa17.33■□□□□ 0.36
SNHG4-201ENST00000448190 PARP3Q9Y6F1 533 aa17.33■□□□□ 0.36
SNHG4-201ENST00000448190 ZNF831Q5JPB2 1677 aa17.32■□□□□ 0.36
SNHG4-201ENST00000448190 IL16Q14005 1332 aa17.32■□□□□ 0.36
SNHG4-201ENST00000448190 TCERG1O14776 1098 aaKnown RBP17.32■□□□□ 0.36
SNHG4-201ENST00000448190 DDR1Q08345 913 aa17.32■□□□□ 0.36
SNHG4-201ENST00000448190 AIMP1Q12904 312 aaKnown RBP17.32■□□□□ 0.36
SNHG4-201ENST00000448190 NFIXQ14938 502 aa17.32■□□□□ 0.36
SNHG4-201ENST00000448190 TBC1D9BQ66K14 1250 aa17.32■□□□□ 0.36
SNHG4-201ENST00000448190 NLGN2Q8NFZ4 835 aa17.32■□□□□ 0.36
SNHG4-201ENST00000448190 VIRMAQ69YN4 1812 aaKnown RBP17.32■□□□□ 0.36
SNHG4-201ENST00000448190 UBR2Q8IWV8 1755 aa17.32■□□□□ 0.36
SNHG4-201ENST00000448190 TUBGCP6Q96RT7 1819 aa17.31■□□□□ 0.36
SNHG4-201ENST00000448190 HLFQ16534 295 aa17.31■□□□□ 0.36
SNHG4-201ENST00000448190 CHPF2Q9P2E5 772 aa17.31■□□□□ 0.36
SNHG4-201ENST00000448190 UBR3Q6ZT12 1888 aa17.31■□□□□ 0.36
SNHG4-201ENST00000448190 COL5A3P25940 1745 aaPredicted RBP17.3■□□□□ 0.36
SNHG4-201ENST00000448190 EXOSC9Q06265 439 aaKnown RBP17.3■□□□□ 0.36
SNHG4-201ENST00000448190 COPS6Q7L5N1 327 aa17.3■□□□□ 0.36
SNHG4-201ENST00000448190 ZBTB3Q9H5J0 574 aa17.3■□□□□ 0.36
SNHG4-201ENST00000448190 FANCIQ9NVI1 1328 aa17.29■□□□□ 0.36
SNHG4-201ENST00000448190 POLRMTO00411 1230 aaKnown RBP17.29■□□□□ 0.36
SNHG4-201ENST00000448190 GOLGA2Q08379 1002 aa17.29■□□□□ 0.36
SNHG4-201ENST00000448190 CCDC24Q8N4L8 307 aa17.29■□□□□ 0.36
SNHG4-201ENST00000448190 XAGE3Q8WTP9 111 aa17.29■□□□□ 0.36
SNHG4-201ENST00000448190 CDCA7LQ96GN5 454 aa17.29■□□□□ 0.36
SNHG4-201ENST00000448190 WWC3Q9ULE0 1092 aa17.29■□□□□ 0.36
SNHG4-201ENST00000448190 FAM177BA6PVY3 158 aa17.28■□□□□ 0.36
SNHG4-201ENST00000448190 SERPINB2P05120 415 aa17.28■□□□□ 0.36
SNHG4-201ENST00000448190 KIF6Q6ZMV9 814 aa17.28■□□□□ 0.36
SNHG4-201ENST00000448190 LRP10Q7Z4F1 713 aa17.28■□□□□ 0.36
SNHG4-201ENST00000448190 DDX21Q9NR30 783 aaKnown RBP eCLIP17.28■□□□□ 0.36
SNHG4-201ENST00000448190 ZNF521Q96K83 1311 aa17.27■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 87.5 ms