RNA–Protein interactions for RNA: ENST00000446356.1

ATP13A3-204, Transcript of ATPase 13A3, humanhuman

TSL 4

Gene ATP13A3, Length 542 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATP13A3-204ENST00000446356 C1orf216Q8TAB5 229 aa11.69□□□□□ -0.54
ATP13A3-204ENST00000446356 FAM200AQ8TCP9 573 aa11.69□□□□□ -0.54
ATP13A3-204ENST00000446356 DKK1O94907 266 aa11.68□□□□□ -0.54
ATP13A3-204ENST00000446356 TATP17735 454 aaPredicted RBP11.68□□□□□ -0.54
ATP13A3-204ENST00000446356 C1orf115Q9H7X2 142 aa11.68□□□□□ -0.54
ATP13A3-204ENST00000446356 NOVA2Q9UNW9 492 aaKnown RBP11.68□□□□□ -0.54
ATP13A3-204ENST00000446356 ZNF232Q9UNY5 417 aa11.68□□□□□ -0.54
ATP13A3-204ENST00000446356 USP3Q9Y6I4 520 aa11.68□□□□□ -0.54
ATP13A3-204ENST00000446356 MSX1P28360 303 aa11.67□□□□□ -0.54
ATP13A3-204ENST00000446356 PSMA6P60900 246 aaKnown RBP11.67□□□□□ -0.54
ATP13A3-204ENST00000446356 TBCELQ5QJ74 424 aa11.67□□□□□ -0.54
ATP13A3-204ENST00000446356 NUCKS1Q9H1E3 243 aaKnown RBP11.67□□□□□ -0.54
ATP13A3-204ENST00000446356 TSPAN10Q9H1Z9 355 aaPredicted RBP11.67□□□□□ -0.54
ATP13A3-204ENST00000446356 EFHC2Q5JST6 749 aa11.66□□□□□ -0.54
ATP13A3-204ENST00000446356 ZNF837Q96EG3 531 aaPredicted RBP11.66□□□□□ -0.54
ATP13A3-204ENST00000446356 CUEDC1Q9NWM3 386 aaPredicted RBP11.66□□□□□ -0.54
ATP13A3-204ENST00000446356 SERTM1A2A2V5 107 aa11.65□□□□□ -0.54
ATP13A3-204ENST00000446356 SUPT5HO00267 1087 aaKnown RBP11.65□□□□□ -0.54
ATP13A3-204ENST00000446356 GMPRP36959 345 aa11.65□□□□□ -0.54
ATP13A3-204ENST00000446356 TEAD4Q15561 434 aa11.65□□□□□ -0.54
ATP13A3-204ENST00000446356 L3MBTL2Q969R5 705 aa11.65□□□□□ -0.54
ATP13A3-204ENST00000446356 TRERF1Q96PN7 1200 aa11.65□□□□□ -0.54
ATP13A3-204ENST00000446356 ZDHHC3Q9NYG2 299 aa11.65□□□□□ -0.54
ATP13A3-204ENST00000446356 PPP1R12BO60237 982 aaPredicted RBP11.64□□□□□ -0.55
ATP13A3-204ENST00000446356 ELOAQ14241 798 aaKnown RBP11.64□□□□□ -0.55
ATP13A3-204ENST00000446356 LBRQ14739 615 aaKnown RBP11.64□□□□□ -0.55
ATP13A3-204ENST00000446356 ARSJQ5FYB0 599 aaPredicted RBP11.64□□□□□ -0.55
ATP13A3-204ENST00000446356 ZNF295-AS1Q8N0V1 137 aa11.64□□□□□ -0.55
ATP13A3-204ENST00000446356 ARXQ96QS3 562 aa11.64□□□□□ -0.55
ATP13A3-204ENST00000446356 RUBCNLQ9H714 662 aa11.64□□□□□ -0.55
ATP13A3-204ENST00000446356 PARP3Q9Y6F1 533 aa11.64□□□□□ -0.55
ATP13A3-204ENST00000446356 ATG7O95352 703 aa11.63□□□□□ -0.55
ATP13A3-204ENST00000446356 NOS2P35228 1153 aa11.63□□□□□ -0.55
ATP13A3-204ENST00000446356 DBN1Q16643 649 aa11.63□□□□□ -0.55
ATP13A3-204ENST00000446356 GAS2L2Q8NHY3 880 aa11.63□□□□□ -0.55
ATP13A3-204ENST00000446356 LCE2CQ5TA81 110 aa11.62□□□□□ -0.55
ATP13A3-204ENST00000446356 BICDL1Q6ZP65 573 aa11.62□□□□□ -0.55
ATP13A3-204ENST00000446356 CHMP7Q8WUX9 453 aaPredicted RBP11.62□□□□□ -0.55
ATP13A3-204ENST00000446356 SCG3Q8WXD2 468 aaKnown RBP11.62□□□□□ -0.55
ATP13A3-204ENST00000446356 WIPF1O43516 503 aa11.61□□□□□ -0.55
ATP13A3-204ENST00000446356 ATP4AP20648 1035 aa11.61□□□□□ -0.55
ATP13A3-204ENST00000446356 SRPK2P78362 688 aaKnown RBP11.61□□□□□ -0.55
ATP13A3-204ENST00000446356 ZDHHC1Q8WTX9 485 aa11.61□□□□□ -0.55
ATP13A3-204ENST00000446356 GTPBP3Q969Y2 492 aaKnown RBP11.61□□□□□ -0.55
ATP13A3-204ENST00000446356 CRISPLD1Q9H336 500 aa11.61□□□□□ -0.55
ATP13A3-204ENST00000446356 GJA3Q9Y6H8 435 aa11.61□□□□□ -0.55
ATP13A3-204ENST00000446356 ATAD2Q6PL18 1390 aa11.61□□□□□ -0.55
ATP13A3-204ENST00000446356 PPP1R15AO75807 674 aaPredicted RBP11.6□□□□□ -0.55
ATP13A3-204ENST00000446356 ACIN1Q9UKV3 1341 aaKnown RBP11.6□□□□□ -0.55
ATP13A3-204ENST00000446356 SWI5Q1ZZU3 235 aa11.59□□□□□ -0.55
ATP13A3-204ENST00000446356 FIGNL1Q6PIW4 674 aa11.59□□□□□ -0.55
ATP13A3-204ENST00000446356 GPR161Q8N6U8 529 aaKnown RBP11.59□□□□□ -0.55
ATP13A3-204ENST00000446356 COL25A1Q9BXS0 654 aaPredicted RBP11.59□□□□□ -0.55
ATP13A3-204ENST00000446356 ZMIZ1Q9ULJ6 1067 aa11.59□□□□□ -0.55
ATP13A3-204ENST00000446356 PHF24Q9UPV7 400 aa11.59□□□□□ -0.55
ATP13A3-204ENST00000446356 EML1O00423 815 aa11.58□□□□□ -0.56
ATP13A3-204ENST00000446356 IGFBP4P22692 258 aa11.58□□□□□ -0.56
ATP13A3-204ENST00000446356 INSM1Q01101 510 aaPredicted RBP11.58□□□□□ -0.56
ATP13A3-204ENST00000446356 STAG2Q8N3U4 1231 aa11.58□□□□□ -0.56
ATP13A3-204ENST00000446356 ARID3AQ99856 593 aa11.58□□□□□ -0.56
ATP13A3-204ENST00000446356 NEUROD4Q9HD90 331 aa11.58□□□□□ -0.56
ATP13A3-204ENST00000446356 GPR25O00155 361 aa11.57□□□□□ -0.56
ATP13A3-204ENST00000446356 LGR5O75473 907 aa11.57□□□□□ -0.56
ATP13A3-204ENST00000446356 TXLNAP40222 546 aa11.57□□□□□ -0.56
ATP13A3-204ENST00000446356 HIRAP54198 1017 aaPredicted RBP11.57□□□□□ -0.56
ATP13A3-204ENST00000446356 NLRP8Q86W28 1048 aa11.57□□□□□ -0.56
ATP13A3-204ENST00000446356 STK32AQ8WU08 396 aa11.57□□□□□ -0.56
ATP13A3-204ENST00000446356 VTI1AQ96AJ9 217 aa11.57□□□□□ -0.56
ATP13A3-204ENST00000446356 GPC6Q9Y625 555 aaPredicted RBP11.57□□□□□ -0.56
ATP13A3-204ENST00000446356 A0A1W2PNR3 127 aa11.56□□□□□ -0.56
ATP13A3-204ENST00000446356 C21orf2O43822 256 aa11.56□□□□□ -0.56
ATP13A3-204ENST00000446356 RHPN1Q8TCX5 695 aa11.56□□□□□ -0.56
ATP13A3-204ENST00000446356 CNTNAP3BQ96NU0 1288 aa11.56□□□□□ -0.56
ATP13A3-204ENST00000446356 CNTNAP3Q9BZ76 1288 aa11.56□□□□□ -0.56
ATP13A3-204ENST00000446356 SH3PXD2AQ5TCZ1 1133 aa11.55□□□□□ -0.56
ATP13A3-204ENST00000446356 C1orf53Q5VUE5 145 aa11.55□□□□□ -0.56
ATP13A3-204ENST00000446356 C2orf49Q9BVC5 232 aaPredicted RBP11.55□□□□□ -0.56
ATP13A3-204ENST00000446356 HCN4Q9Y3Q4 1203 aa11.55□□□□□ -0.56
ATP13A3-204ENST00000446356 TMEM164Q5U3C3 297 aa11.54□□□□□ -0.56
ATP13A3-204ENST00000446356 PHACTR1Q9C0D0 580 aa11.54□□□□□ -0.56
ATP13A3-204ENST00000446356 FOXO3O43524 673 aa11.53□□□□□ -0.56
ATP13A3-204ENST00000446356 POTEAQ6S8J7 498 aa11.53□□□□□ -0.56
ATP13A3-204ENST00000446356 ZIC5Q96T25 663 aa11.53□□□□□ -0.56
ATP13A3-204ENST00000446356 CFHR5Q9BXR6 569 aa11.53□□□□□ -0.56
ATP13A3-204ENST00000446356 NSFL1CQ9UNZ2 370 aaKnown RBP11.53□□□□□ -0.56
ATP13A3-204ENST00000446356 WEE1P30291 646 aa11.52□□□□□ -0.57
ATP13A3-204ENST00000446356 HIF1AQ16665 826 aa11.52□□□□□ -0.57
ATP13A3-204ENST00000446356 RNFT1Q5M7Z0 435 aa11.52□□□□□ -0.57
ATP13A3-204ENST00000446356 ALDH16A1Q8IZ83 802 aa11.52□□□□□ -0.57
ATP13A3-204ENST00000446356 NGLY1Q96IV0 654 aa11.52□□□□□ -0.57
ATP13A3-204ENST00000446356 MBIPQ9NS73 344 aa11.52□□□□□ -0.57
ATP13A3-204ENST00000446356 STK17AQ9UEE5 414 aa11.52□□□□□ -0.57
ATP13A3-204ENST00000446356 ATXN7L1Q9ULK2 861 aaPredicted RBP11.52□□□□□ -0.57
ATP13A3-204ENST00000446356 PCDHGC4Q9Y5F7 938 aa11.52□□□□□ -0.57
ATP13A3-204ENST00000446356 PRMT3O60678 531 aa11.51□□□□□ -0.57
ATP13A3-204ENST00000446356 THBS1P07996 1170 aa11.51□□□□□ -0.57
ATP13A3-204ENST00000446356 MX2P20592 715 aa11.51□□□□□ -0.57
ATP13A3-204ENST00000446356 ZCCHC2Q9C0B9 1178 aaKnown RBP11.51□□□□□ -0.57
ATP13A3-204ENST00000446356 UTP3Q9NQZ2 479 aaKnown RBP eCLIP11.51□□□□□ -0.57
ATP13A3-204ENST00000446356 ATXN7O15265 892 aaPredicted RBP11.5□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms