RNA–Protein interactions for RNA: ENST00000445721.5

NUP50-211, Transcript of nucleoporin 50, humanhuman

TSL 5

Gene NUP50, Length 443 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-211ENST00000445721 ADAMTS7Q9UKP4 1686 aa32.36■■■□□ 2.77
NUP50-211ENST00000445721 ZC3H4Q9UPT8 1303 aaKnown RBP32.35■■■□□ 2.77
NUP50-211ENST00000445721 LMNB1P20700 586 aa32.35■■■□□ 2.77
NUP50-211ENST00000445721 LGR6Q9HBX8 967 aa32.35■■■□□ 2.77
NUP50-211ENST00000445721 NARFQ9UHQ1 456 aa32.35■■■□□ 2.77
NUP50-211ENST00000445721 IL13P35225 146 aa32.34■■■□□ 2.77
NUP50-211ENST00000445721 SLC39A6Q13433 755 aa32.34■■■□□ 2.77
NUP50-211ENST00000445721 SCN11AQ9UI33 1791 aa32.33■■■□□ 2.77
NUP50-211ENST00000445721 GLTPD2A6NH11 291 aa32.33■■■□□ 2.77
NUP50-211ENST00000445721 VEGFAP15692 232 aaPredicted RBP32.33■■■□□ 2.77
NUP50-211ENST00000445721 SERPINB2P05120 415 aa32.32■■■□□ 2.76
NUP50-211ENST00000445721 PRELPP51888 382 aa32.32■■■□□ 2.76
NUP50-211ENST00000445721 TNS4Q8IZW8 715 aa32.32■■■□□ 2.76
NUP50-211ENST00000445721 TTLL6Q8N841 843 aa32.32■■■□□ 2.76
NUP50-211ENST00000445721 ZBTB1Q9Y2K1 713 aa32.3■■■□□ 2.76
NUP50-211ENST00000445721 COL15A1P39059 1388 aa32.3■■■□□ 2.76
NUP50-211ENST00000445721 HSPA5P11021 654 aaKnown RBP32.29■■■□□ 2.76
NUP50-211ENST00000445721 EIF4G2P78344 907 aaKnown RBP eCLIP32.29■■■□□ 2.76
NUP50-211ENST00000445721 TRIM26Q12899 539 aaPredicted RBP32.29■■■□□ 2.76
NUP50-211ENST00000445721 C2CD5Q86YS7 1000 aa32.29■■■□□ 2.76
NUP50-211ENST00000445721 BCL2L12Q9HB09 334 aa32.29■■■□□ 2.76
NUP50-211ENST00000445721 AFDNP55196 1824 aaKnown RBP32.28■■■□□ 2.76
NUP50-211ENST00000445721 RNMTO43148 476 aaKnown RBP32.28■■■□□ 2.76
NUP50-211ENST00000445721 H0YIN7 160 aa32.26■■■□□ 2.75
NUP50-211ENST00000445721 KNSTRNQ9Y448 316 aa32.25■■■□□ 2.75
NUP50-211ENST00000445721 BICDL1Q6ZP65 573 aa32.24■■■□□ 2.75
NUP50-211ENST00000445721 NFKBIEO00221 500 aa32.23■■■□□ 2.75
NUP50-211ENST00000445721 HMOX1P09601 288 aa32.23■■■□□ 2.75
NUP50-211ENST00000445721 CANXP27824 592 aaKnown RBP32.23■■■□□ 2.75
NUP50-211ENST00000445721 NRXN2Q9P2S2 1712 aa32.22■■■□□ 2.75
NUP50-211ENST00000445721 HSPA1AP0DMV8 641 aaKnown RBP32.21■■■□□ 2.75
NUP50-211ENST00000445721 HSPA1BP0DMV9 641 aaKnown RBP32.21■■■□□ 2.75
NUP50-211ENST00000445721 VSIG10Q8N0Z9 540 aa32.21■■■□□ 2.75
NUP50-211ENST00000445721 CARMIL3Q8ND23 1372 aa32.2■■■□□ 2.75
NUP50-211ENST00000445721 MRC1P22897 1456 aa32.2■■■□□ 2.75
NUP50-211ENST00000445721 CCDC88AQ3V6T2 1871 aa32.19■■■□□ 2.74
NUP50-211ENST00000445721 DLEC1Q9Y238 1755 aa32.19■■■□□ 2.74
NUP50-211ENST00000445721 POTECB2RU33 542 aa32.18■■■□□ 2.74
NUP50-211ENST00000445721 MTHFSDQ2M296 383 aaKnown RBP32.18■■■□□ 2.74
NUP50-211ENST00000445721 DPY19L2Q6NUT2 758 aa32.18■■■□□ 2.74
NUP50-211ENST00000445721 ZNF622Q969S3 477 aaKnown RBP eCLIP32.17■■■□□ 2.74
NUP50-211ENST00000445721 ZNF219Q9P2Y4 722 aaPredicted RBP32.17■■■□□ 2.74
NUP50-211ENST00000445721 STARD3NLO95772 234 aa32.16■■■□□ 2.74
NUP50-211ENST00000445721 EIF5P55010 431 aaKnown RBP32.15■■■□□ 2.74
NUP50-211ENST00000445721 TIAM2Q8IVF5 1701 aa32.14■■■□□ 2.74
NUP50-211ENST00000445721 A0A087WZG4 1122 aa32.14■■■□□ 2.74
NUP50-211ENST00000445721 C21orf2O43822 256 aa32.13■■■□□ 2.73
NUP50-211ENST00000445721 ERFEQ4G0M1 354 aa32.13■■■□□ 2.73
NUP50-211ENST00000445721 TBC1D9BQ66K14 1250 aa32.13■■■□□ 2.73
NUP50-211ENST00000445721 TTC5Q8N0Z6 440 aa32.13■■■□□ 2.73
NUP50-211ENST00000445721 CLSPNQ9HAW4 1339 aa32.12■■■□□ 2.73
NUP50-211ENST00000445721 AMER1Q5JTC6 1135 aaPredicted RBP32.12■■■□□ 2.73
NUP50-211ENST00000445721 CCDC24Q8N4L8 307 aa32.12■■■□□ 2.73
NUP50-211ENST00000445721 PCGF6Q9BYE7 350 aa32.12■■■□□ 2.73
NUP50-211ENST00000445721 PDE6BP35913 854 aa32.11■■■□□ 2.73
NUP50-211ENST00000445721 BRIP1Q9BX63 1249 aa32.11■■■□□ 2.73
NUP50-211ENST00000445721 PDZRN3Q9UPQ7 1066 aa32.11■■■□□ 2.73
NUP50-211ENST00000445721 VIRMAQ69YN4 1812 aaKnown RBP32.11■■■□□ 2.73
NUP50-211ENST00000445721 ZNF330Q9Y3S2 320 aaPredicted RBP32.1■■■□□ 2.73
NUP50-211ENST00000445721 TBC1D2BQ9UPU7 963 aa32.09■■■□□ 2.73
NUP50-211ENST00000445721 DIAPH1O60610 1272 aaKnown RBP32.07■■■□□ 2.72
NUP50-211ENST00000445721 PRR5LQ6MZQ0 368 aa32.07■■■□□ 2.72
NUP50-211ENST00000445721 ZNF496Q96IT1 587 aaPredicted RBP32.07■■■□□ 2.72
NUP50-211ENST00000445721 CHADLQ6NUI6 762 aa32.05■■■□□ 2.72
NUP50-211ENST00000445721 ANKRD31Q8N7Z5 1873 aa32.05■■■□□ 2.72
NUP50-211ENST00000445721 UBR2Q8IWV8 1755 aa32.04■■■□□ 2.72
NUP50-211ENST00000445721 TEX13AQ9BXU3 409 aaPredicted RBP32.04■■■□□ 2.72
NUP50-211ENST00000445721 TAOK3Q9H2K8 898 aa32.04■■■□□ 2.72
NUP50-211ENST00000445721 NPHP1O15259 732 aa32.03■■■□□ 2.72
NUP50-211ENST00000445721 CREBZFQ9NS37 354 aa32.03■■■□□ 2.72
NUP50-211ENST00000445721 MKRN1Q9UHC7 482 aaKnown RBP32.03■■■□□ 2.72
NUP50-211ENST00000445721 DDNO94850 711 aaPredicted RBP32.02■■■□□ 2.72
NUP50-211ENST00000445721 TEFQ10587 303 aa32.02■■■□□ 2.72
NUP50-211ENST00000445721 ZNF790Q6PG37 636 aa32.02■■■□□ 2.72
NUP50-211ENST00000445721 HEG1Q9ULI3 1381 aa32.02■■■□□ 2.72
NUP50-211ENST00000445721 POTEIP0CG38 1075 aa32.01■■■□□ 2.71
NUP50-211ENST00000445721 POTEJP0CG39 1038 aa32.01■■■□□ 2.71
NUP50-211ENST00000445721 SETDB2Q96T68 719 aa32.01■■■□□ 2.71
NUP50-211ENST00000445721 FER1L6Q2WGJ9 1857 aa32.01■■■□□ 2.71
NUP50-211ENST00000445721 LTBP3Q9NS15 1303 aa32■■■□□ 2.71
NUP50-211ENST00000445721 DICER1Q9UPY3 1922 aaKnown RBP32■■■□□ 2.71
NUP50-211ENST00000445721 IL6STP40189 918 aaPredicted RBP32■■■□□ 2.71
NUP50-211ENST00000445721 NPM2Q86SE8 214 aaKnown RBP32■■■□□ 2.71
NUP50-211ENST00000445721 CNBD1Q8NA66 436 aa32■■■□□ 2.71
NUP50-211ENST00000445721 IL17REQ8NFR9 667 aa32■■■□□ 2.71
NUP50-211ENST00000445721 CNKSR1Q969H4 720 aa32■■■□□ 2.71
NUP50-211ENST00000445721 COL11A2P13942 1736 aaPredicted RBP31.98■■■□□ 2.71
NUP50-211ENST00000445721 A1BGP04217 495 aa31.98■■■□□ 2.71
NUP50-211ENST00000445721 PRPF40BQ6NWY9 871 aaKnown RBP31.98■■■□□ 2.71
NUP50-211ENST00000445721 GNAT3A8MTJ3 354 aa31.97■■■□□ 2.71
NUP50-211ENST00000445721 STYK1Q6J9G0 422 aa31.97■■■□□ 2.71
NUP50-211ENST00000445721 CAMTA2O94983 1202 aa31.96■■■□□ 2.71
NUP50-211ENST00000445721 SRGNP10124 158 aa31.96■■■□□ 2.71
NUP50-211ENST00000445721 ST5P78524 1137 aa31.96■■■□□ 2.71
NUP50-211ENST00000445721 CC2D1BQ5T0F9 858 aaKnown RBP31.96■■■□□ 2.71
NUP50-211ENST00000445721 FMNL2Q96PY5 1086 aa31.96■■■□□ 2.71
NUP50-211ENST00000445721 SCN7AQ01118 1682 aa31.95■■■□□ 2.71
NUP50-211ENST00000445721 SLX4Q8IY92 1834 aa31.95■■■□□ 2.7
NUP50-211ENST00000445721 U2SURPO15042 1029 aaKnown RBP31.94■■■□□ 2.7
NUP50-211ENST00000445721 SOGA3Q5TF21 947 aa31.94■■■□□ 2.7
Retrieved 100 of 20,778 RNA–protein pairs in 1664.1 ms