RNA–Protein interactions for RNA: ENST00000445481.1

RPL39P40-201, Transcript of ribosomal protein L39 pseudogene 40, humanhuman

BASIC

Gene RPL39P40, Length 146 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPL39P40-201ENST00000445481 NR1H3Q13133 447 aa3.92□□□□□ -1.78
RPL39P40-201ENST00000445481 TMEM214Q6NUQ4 689 aaKnown RBP3.92□□□□□ -1.78
RPL39P40-201ENST00000445481 CHSY3Q70JA7 882 aa3.92□□□□□ -1.78
RPL39P40-201ENST00000445481 FCHSD1Q86WN1 690 aa3.92□□□□□ -1.78
RPL39P40-201ENST00000445481 PGBD3Q8N328 593 aa3.92□□□□□ -1.78
RPL39P40-201ENST00000445481 ARXQ96QS3 562 aa3.92□□□□□ -1.78
RPL39P40-201ENST00000445481 ZCCHC2Q9C0B9 1178 aaKnown RBP3.92□□□□□ -1.78
RPL39P40-201ENST00000445481 ETNK1Q9HBU6 452 aa3.92□□□□□ -1.78
RPL39P40-201ENST00000445481 USP35Q9P2H5 1018 aa3.92□□□□□ -1.78
RPL39P40-201ENST00000445481 SHROOM4Q9ULL8 1493 aa3.92□□□□□ -1.78
RPL39P40-201ENST00000445481 DCDC2BA2VCK2 349 aa3.91□□□□□ -1.78
RPL39P40-201ENST00000445481 CD33P20138 364 aa3.91□□□□□ -1.78
RPL39P40-201ENST00000445481 ATP4AP20648 1035 aa3.91□□□□□ -1.78
RPL39P40-201ENST00000445481 PLA2G4AP47712 749 aa3.91□□□□□ -1.78
RPL39P40-201ENST00000445481 RSPO4Q2I0M5 234 aaPredicted RBP3.91□□□□□ -1.78
RPL39P40-201ENST00000445481 EFHC2Q5JST6 749 aa3.91□□□□□ -1.78
RPL39P40-201ENST00000445481 GNASQ5JWF2 1037 aa3.91□□□□□ -1.78
RPL39P40-201ENST00000445481 KRTAP4-12Q9BQ66 201 aa3.91□□□□□ -1.78
RPL39P40-201ENST00000445481 CRISPLD1Q9H336 500 aa3.91□□□□□ -1.78
RPL39P40-201ENST00000445481 NOP58Q9Y2X3 529 aaKnown RBP3.91□□□□□ -1.78
RPL39P40-201ENST00000445481 ARAFP10398 606 aa3.9□□□□□ -1.79
RPL39P40-201ENST00000445481 PCBP4P57723 403 aaKnown RBP3.9□□□□□ -1.79
RPL39P40-201ENST00000445481 PDE4CQ08493 712 aa3.9□□□□□ -1.79
RPL39P40-201ENST00000445481 LBRQ14739 615 aaKnown RBP3.9□□□□□ -1.79
RPL39P40-201ENST00000445481 LCE3BQ5TA77 95 aa3.9□□□□□ -1.79
RPL39P40-201ENST00000445481 TRIM52Q96A61 297 aa3.9□□□□□ -1.79
RPL39P40-201ENST00000445481 ESF1Q9H501 851 aaKnown RBP3.9□□□□□ -1.79
RPL39P40-201ENST00000445481 CEP126Q9P2H0 1117 aa3.9□□□□□ -1.79
RPL39P40-201ENST00000445481 MAPTP10636 758 aaKnown RBP3.89□□□□□ -1.79
RPL39P40-201ENST00000445481 PDIA4P13667 645 aaKnown RBP3.89□□□□□ -1.79
RPL39P40-201ENST00000445481 GATA4P43694 442 aa3.89□□□□□ -1.79
RPL39P40-201ENST00000445481 TLR1Q15399 786 aa3.89□□□□□ -1.79
RPL39P40-201ENST00000445481 TMEM259Q4ZIN3 620 aa3.89□□□□□ -1.79
RPL39P40-201ENST00000445481 NKAPLQ5M9Q1 402 aa3.89□□□□□ -1.79
RPL39P40-201ENST00000445481 CCDC125Q86Z20 511 aa3.89□□□□□ -1.79
RPL39P40-201ENST00000445481 MTMR14Q8NCE2 650 aa3.89□□□□□ -1.79
RPL39P40-201ENST00000445481 RHBDD1Q8TEB9 315 aa3.89□□□□□ -1.79
RPL39P40-201ENST00000445481 PLVAPQ9BX97 442 aa3.89□□□□□ -1.79
RPL39P40-201ENST00000445481 ZMYND15Q9H091 742 aa3.89□□□□□ -1.79
RPL39P40-201ENST00000445481 STRN4Q9NRL3 753 aa3.89□□□□□ -1.79
RPL39P40-201ENST00000445481 TPSG1Q9NRR2 321 aa3.89□□□□□ -1.79
RPL39P40-201ENST00000445481 NOP53Q9NZM5 478 aaKnown RBP3.89□□□□□ -1.79
RPL39P40-201ENST00000445481 SCO2A0A1W2PP80 73 aa3.88□□□□□ -1.79
RPL39P40-201ENST00000445481 FAM229AH3BQW9 127 aa3.88□□□□□ -1.79
RPL39P40-201ENST00000445481 ATXN7O15265 892 aaPredicted RBP3.88□□□□□ -1.79
RPL39P40-201ENST00000445481 MYCP01106 439 aaPredicted RBP3.88□□□□□ -1.79
RPL39P40-201ENST00000445481 SCNN1DP51172 638 aa3.88□□□□□ -1.79
RPL39P40-201ENST00000445481 FGD1P98174 961 aa3.88□□□□□ -1.79
RPL39P40-201ENST00000445481 TNP2Q05952 138 aa3.88□□□□□ -1.79
RPL39P40-201ENST00000445481 IL27Q8NEV9 243 aa3.88□□□□□ -1.79
RPL39P40-201ENST00000445481 PCDHGC4Q9Y5F7 938 aa3.88□□□□□ -1.79
RPL39P40-201ENST00000445481 USP3Q9Y6I4 520 aa3.88□□□□□ -1.79
RPL39P40-201ENST00000445481 WASHC2AQ641Q2 1341 aa3.88□□□□□ -1.79
RPL39P40-201ENST00000445481 WASHC2CQ9Y4E1 1318 aa3.88□□□□□ -1.79
RPL39P40-201ENST00000445481 A0A1W2PNR3 127 aa3.87□□□□□ -1.79
RPL39P40-201ENST00000445481 KHNYNO15037 678 aaKnown RBP3.87□□□□□ -1.79
RPL39P40-201ENST00000445481 RRP9O43818 475 aaKnown RBP3.87□□□□□ -1.79
RPL39P40-201ENST00000445481 ADH6P28332 368 aa3.87□□□□□ -1.79
RPL39P40-201ENST00000445481 GTF2E1P29083 439 aaPredicted RBP3.87□□□□□ -1.79
RPL39P40-201ENST00000445481 MCCD1P59942 119 aaPredicted RBP3.87□□□□□ -1.79
RPL39P40-201ENST00000445481 ZNF326Q5BKZ1 582 aaKnown RBP3.87□□□□□ -1.79
RPL39P40-201ENST00000445481 TAF7LQ5H9L4 462 aa3.87□□□□□ -1.79
RPL39P40-201ENST00000445481 TBC1D9Q6ZT07 1266 aa3.87□□□□□ -1.79
RPL39P40-201ENST00000445481 ZNF295-AS1Q8N0V1 137 aa3.87□□□□□ -1.79
RPL39P40-201ENST00000445481 AIDAQ96BJ3 306 aa3.87□□□□□ -1.79
RPL39P40-201ENST00000445481 PCMTD1Q96MG8 357 aaPredicted RBP3.87□□□□□ -1.79
RPL39P40-201ENST00000445481 SNRKQ9NRH2 765 aa3.87□□□□□ -1.79
RPL39P40-201ENST00000445481 WRNQ14191 1432 aaPredicted RBP eCLIP3.87□□□□□ -1.79
RPL39P40-201ENST00000445481 PIK3R2O00459 728 aa3.86□□□□□ -1.79
RPL39P40-201ENST00000445481 DYRK3O43781 588 aa3.86□□□□□ -1.79
RPL39P40-201ENST00000445481 SPATA31C1P0DKV0 1188 aa3.86□□□□□ -1.79
RPL39P40-201ENST00000445481 AAMPQ13685 434 aa3.86□□□□□ -1.79
RPL39P40-201ENST00000445481 COL9A3Q14050 684 aaPredicted RBP3.86□□□□□ -1.79
RPL39P40-201ENST00000445481 OXLD1Q5BKU9 147 aa3.86□□□□□ -1.79
RPL39P40-201ENST00000445481 ESCO1Q5FWF5 840 aa3.86□□□□□ -1.79
RPL39P40-201ENST00000445481 FIGNL1Q6PIW4 674 aa3.86□□□□□ -1.79
RPL39P40-201ENST00000445481 C8orf86Q6ZUL3 223 aa3.86□□□□□ -1.79
RPL39P40-201ENST00000445481 FAM43AQ8N2R8 423 aa3.86□□□□□ -1.79
RPL39P40-201ENST00000445481 PHTF2Q8N3S3 785 aa3.86□□□□□ -1.79
RPL39P40-201ENST00000445481 KRTAP9-9Q9BYP9 154 aa3.86□□□□□ -1.79
RPL39P40-201ENST00000445481 KRTAP9-4Q9BYQ2 154 aa3.86□□□□□ -1.79
RPL39P40-201ENST00000445481 ARSJQ5FYB0 599 aaPredicted RBP3.85□□□□□ -1.79
RPL39P40-201ENST00000445481 PRSS36Q5K4E3 855 aa3.85□□□□□ -1.79
RPL39P40-201ENST00000445481 FAM182BQ5T319 152 aa3.85□□□□□ -1.79
RPL39P40-201ENST00000445481 ZNF468Q5VIY5 522 aaPredicted RBP3.85□□□□□ -1.79
RPL39P40-201ENST00000445481 NLRP8Q86W28 1048 aa3.85□□□□□ -1.79
RPL39P40-201ENST00000445481 KRTAP19-1Q8IUB9 90 aa3.85□□□□□ -1.79
RPL39P40-201ENST00000445481 BCANQ96GW7 911 aa3.85□□□□□ -1.79
RPL39P40-201ENST00000445481 ZIC5Q96T25 663 aa3.85□□□□□ -1.79
RPL39P40-201ENST00000445481 MDFIQ99750 246 aa3.85□□□□□ -1.79
RPL39P40-201ENST00000445481 SERTAD1Q9UHV2 236 aa3.85□□□□□ -1.79
RPL39P40-201ENST00000445481 DOLKQ9UPQ8 538 aa3.85□□□□□ -1.79
RPL39P40-201ENST00000445481 PARP3Q9Y6F1 533 aa3.85□□□□□ -1.79
RPL39P40-201ENST00000445481 PPM1GO15355 546 aaPredicted RBP3.84□□□□□ -1.79
RPL39P40-201ENST00000445481 INHAP05111 366 aa3.84□□□□□ -1.79
RPL39P40-201ENST00000445481 ANP32AP39687 249 aaKnown RBP3.84□□□□□ -1.79
RPL39P40-201ENST00000445481 GDF10P55107 478 aa3.84□□□□□ -1.79
RPL39P40-201ENST00000445481 GRIK4Q16099 956 aa3.84□□□□□ -1.79
RPL39P40-201ENST00000445481 ARTNQ5T4W7 220 aa3.84□□□□□ -1.79
RPL39P40-201ENST00000445481 GOPCQ9HD26 462 aa3.84□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 12.1 ms