RNA–Protein interactions for RNA: ENST00000443621.1

LINC00393-201, long intergenic non-protein coding RNA 393, humanhuman

TSL 3 BASIC

Gene LINC00393, Length 282 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00393-201ENST00000443621 LINS1Q8NG48 757 aa3.53□□□□□ -1.84
LINC00393-201ENST00000443621 SSH3Q8TE77 659 aa3.53□□□□□ -1.84
LINC00393-201ENST00000443621 THUMPD2Q9BTF0 503 aaKnown RBP3.53□□□□□ -1.84
LINC00393-201ENST00000443621 LGR6Q9HBX8 967 aa3.53□□□□□ -1.84
LINC00393-201ENST00000443621 RBM19Q9Y4C8 960 aaKnown RBP3.53□□□□□ -1.84
LINC00393-201ENST00000443621 SPATA31A1Q5TZJ5 1347 aa3.52□□□□□ -1.85
LINC00393-201ENST00000443621 KAT6BQ8WYB5 2073 aa3.52□□□□□ -1.85
LINC00393-201ENST00000443621 EXOC5O00471 708 aa3.52□□□□□ -1.85
LINC00393-201ENST00000443621 ZBTB22O15209 634 aa3.52□□□□□ -1.85
LINC00393-201ENST00000443621 ONECUT3O60422 494 aaPredicted RBP3.52□□□□□ -1.85
LINC00393-201ENST00000443621 IGSF3O75054 1194 aa3.52□□□□□ -1.85
LINC00393-201ENST00000443621 IGHDP01880 384 aa3.52□□□□□ -1.85
LINC00393-201ENST00000443621 HSP90B1P14625 803 aaKnown RBP3.52□□□□□ -1.85
LINC00393-201ENST00000443621 CABP4P57796 275 aa3.52□□□□□ -1.85
LINC00393-201ENST00000443621 ATP8B2P98198 1209 aa3.52□□□□□ -1.85
LINC00393-201ENST00000443621 XPCQ01831 940 aaPredicted RBP3.52□□□□□ -1.85
LINC00393-201ENST00000443621 NEXNQ0ZGT2 675 aa3.52□□□□□ -1.85
LINC00393-201ENST00000443621 FKBP5Q13451 457 aaPredicted RBP3.52□□□□□ -1.85
LINC00393-201ENST00000443621 BEND3Q5T5X7 828 aa3.52□□□□□ -1.85
LINC00393-201ENST00000443621 CEP85Q6P2H3 762 aa3.52□□□□□ -1.85
LINC00393-201ENST00000443621 MPRIPQ6WCQ1 1025 aa3.52□□□□□ -1.85
LINC00393-201ENST00000443621 ERC1Q8IUD2 1116 aa3.52□□□□□ -1.85
LINC00393-201ENST00000443621 NFATC2IPQ8NCF5 419 aa3.52□□□□□ -1.85
LINC00393-201ENST00000443621 DNAAF4Q8WXU2 420 aa3.52□□□□□ -1.85
LINC00393-201ENST00000443621 LTV1Q96GA3 475 aaPredicted RBP3.52□□□□□ -1.85
LINC00393-201ENST00000443621 DDRGK1Q96HY6 314 aa3.52□□□□□ -1.85
LINC00393-201ENST00000443621 AK7Q96M32 723 aa3.52□□□□□ -1.85
LINC00393-201ENST00000443621 USP44Q9H0E7 712 aa3.52□□□□□ -1.85
LINC00393-201ENST00000443621 UPF2Q9HAU5 1272 aaKnown RBP3.52□□□□□ -1.85
LINC00393-201ENST00000443621 ZBTB47Q9UFB7 747 aaPredicted RBP3.52□□□□□ -1.85
LINC00393-201ENST00000443621 NOP58Q9Y2X3 529 aaKnown RBP3.52□□□□□ -1.85
LINC00393-201ENST00000443621 ITGB4P16144 1822 aa3.51□□□□□ -1.85
LINC00393-201ENST00000443621 GLI3P10071 1580 aa3.51□□□□□ -1.85
LINC00393-201ENST00000443621 SPATA31A5Q5VU36 1347 aa3.51□□□□□ -1.85
LINC00393-201ENST00000443621 SPATA31A7Q8IWB4 1347 aa3.51□□□□□ -1.85
LINC00393-201ENST00000443621 USP42Q9H9J4 1324 aaKnown RBP3.51□□□□□ -1.85
LINC00393-201ENST00000443621 KCPQ6ZWJ8 1503 aa3.51□□□□□ -1.85
LINC00393-201ENST00000443621 ERVV-1B6SEH8 477 aa3.51□□□□□ -1.85
LINC00393-201ENST00000443621 STARD3NLO95772 234 aa3.51□□□□□ -1.85
LINC00393-201ENST00000443621 ANP32AP39687 249 aaKnown RBP3.51□□□□□ -1.85
LINC00393-201ENST00000443621 POLA2Q14181 598 aa3.51□□□□□ -1.85
LINC00393-201ENST00000443621 PDIA6Q15084 440 aa3.51□□□□□ -1.85
LINC00393-201ENST00000443621 VPS72Q15906 364 aa3.51□□□□□ -1.85
LINC00393-201ENST00000443621 C8orf34Q49A92 452 aa3.51□□□□□ -1.85
LINC00393-201ENST00000443621 HSP90AB3PQ58FF7 597 aa3.51□□□□□ -1.85
LINC00393-201ENST00000443621 ANKRD13DQ6ZTN6 518 aa3.51□□□□□ -1.85
LINC00393-201ENST00000443621 LRP10Q7Z4F1 713 aa3.51□□□□□ -1.85
LINC00393-201ENST00000443621 SIRT2Q8IXJ6 389 aa3.51□□□□□ -1.85
LINC00393-201ENST00000443621 CCDC191Q8NCU4 936 aa3.51□□□□□ -1.85
LINC00393-201ENST00000443621 PLBD2Q8NHP8 589 aa3.51□□□□□ -1.85
LINC00393-201ENST00000443621 SMARCC1Q92922 1105 aaPredicted RBP3.51□□□□□ -1.85
LINC00393-201ENST00000443621 IL17RAQ96F46 866 aa3.51□□□□□ -1.85
LINC00393-201ENST00000443621 METTL22Q9BUU2 404 aaPredicted RBP3.51□□□□□ -1.85
LINC00393-201ENST00000443621 BCL2L13Q9BXK5 485 aa3.51□□□□□ -1.85
LINC00393-201ENST00000443621 BTG4Q9NY30 223 aa3.51□□□□□ -1.85
LINC00393-201ENST00000443621 STAP2Q9UGK3 403 aa3.51□□□□□ -1.85
LINC00393-201ENST00000443621 PDZRN3Q9UPQ7 1066 aa3.51□□□□□ -1.85
LINC00393-201ENST00000443621 RREB1Q92766 1687 aa3.51□□□□□ -1.85
LINC00393-201ENST00000443621 ADCY9O60503 1353 aa3.51□□□□□ -1.85
LINC00393-201ENST00000443621 TTC41PQ6P2S7 1318 aa3.5□□□□□ -1.85
LINC00393-201ENST00000443621 C5P01031 1676 aa3.5□□□□□ -1.85
LINC00393-201ENST00000443621 PI4KAP2A4QPH2 592 aa3.5□□□□□ -1.85
LINC00393-201ENST00000443621 GRM8O00222 908 aa3.5□□□□□ -1.85
LINC00393-201ENST00000443621 ELL2O00472 640 aaPredicted RBP3.5□□□□□ -1.85
LINC00393-201ENST00000443621 UBTFL1P0CB47 393 aaPredicted RBP3.5□□□□□ -1.85
LINC00393-201ENST00000443621 IL6STP40189 918 aaPredicted RBP3.5□□□□□ -1.85
LINC00393-201ENST00000443621 CHRNA2Q15822 529 aa3.5□□□□□ -1.85
LINC00393-201ENST00000443621 RABL6Q3YEC7 729 aaPredicted RBP3.5□□□□□ -1.85
LINC00393-201ENST00000443621 TMED8Q6PL24 325 aaPredicted RBP3.5□□□□□ -1.85
LINC00393-201ENST00000443621 CASC1Q6TDU7 716 aa3.5□□□□□ -1.85
LINC00393-201ENST00000443621 UNC5CLQ8IV45 518 aa3.5□□□□□ -1.85
LINC00393-201ENST00000443621 USHBP1Q8N6Y0 703 aa3.5□□□□□ -1.85
LINC00393-201ENST00000443621 PI4KAP1Q8N8J0 262 aa3.5□□□□□ -1.85
LINC00393-201ENST00000443621 CABLES1Q8TDN4 633 aa3.5□□□□□ -1.85
LINC00393-201ENST00000443621 DDX17Q92841 729 aaKnown RBP3.5□□□□□ -1.85
LINC00393-201ENST00000443621 KIF1BPQ96EK5 621 aa3.5□□□□□ -1.85
LINC00393-201ENST00000443621 ZNF496Q96IT1 587 aaPredicted RBP3.5□□□□□ -1.85
LINC00393-201ENST00000443621 IPO9Q96P70 1041 aaKnown RBP3.5□□□□□ -1.85
LINC00393-201ENST00000443621 PLA2G12BQ9BX93 195 aa3.5□□□□□ -1.85
LINC00393-201ENST00000443621 GPR108Q9NPR9 543 aa3.5□□□□□ -1.85
LINC00393-201ENST00000443621 TMOD3Q9NYL9 352 aa3.5□□□□□ -1.85
LINC00393-201ENST00000443621 CHPF2Q9P2E5 772 aa3.5□□□□□ -1.85
LINC00393-201ENST00000443621 ARFGEF2Q9Y6D5 1785 aa3.5□□□□□ -1.85
LINC00393-201ENST00000443621 NUP188Q5SRE5 1749 aa3.5□□□□□ -1.85
LINC00393-201ENST00000443621 TOGARAM1Q9Y4F4 1720 aa3.5□□□□□ -1.85
LINC00393-201ENST00000443621 THSD7AQ9UPZ6 1657 aa3.49□□□□□ -1.85
LINC00393-201ENST00000443621 SALL3Q9BXA9 1300 aa3.49□□□□□ -1.85
LINC00393-201ENST00000443621 CDHR2Q9BYE9 1310 aa3.49□□□□□ -1.85
LINC00393-201ENST00000443621 BCL9LQ86UU0 1499 aa3.49□□□□□ -1.85
LINC00393-201ENST00000443621 ANKRD36CQ5JPF3 1778 aa3.49□□□□□ -1.85
LINC00393-201ENST00000443621 SENP3-EIF4A1A0A087X0R7 540 aa3.49□□□□□ -1.85
LINC00393-201ENST00000443621 NEURL1BA8MQ27 555 aa3.49□□□□□ -1.85
LINC00393-201ENST00000443621 H7C1W4 665 aa3.49□□□□□ -1.85
LINC00393-201ENST00000443621 HIP1O00291 1037 aa3.49□□□□□ -1.85
LINC00393-201ENST00000443621 PDIA4P13667 645 aaKnown RBP3.49□□□□□ -1.85
LINC00393-201ENST00000443621 RBM25P49756 843 aaKnown RBP3.49□□□□□ -1.85
LINC00393-201ENST00000443621 GCKRQ14397 625 aa3.49□□□□□ -1.85
LINC00393-201ENST00000443621 BECN1Q14457 450 aa3.49□□□□□ -1.85
LINC00393-201ENST00000443621 DDB1Q16531 1140 aa3.49□□□□□ -1.85
LINC00393-201ENST00000443621 KRT24Q2M2I5 525 aa3.49□□□□□ -1.85
Retrieved 100 of 20,778 RNA–protein pairs in 64.1 ms