RNA–Protein interactions for RNA: ENST00000443197.5

CALD1-210, Transcript of caldesmon 1, humanhuman

TSL 5

Gene CALD1, Length 4,173 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALD1-210ENST00000443197 EIF4A1P60842 406 aaKnown RBP12.8□□□□□ -0.36
CALD1-210ENST00000443197 ACSBG1Q96GR2 724 aa12.8□□□□□ -0.36
CALD1-210ENST00000443197 PREX1Q8TCU6 1659 aa12.79□□□□□ -0.36
CALD1-210ENST00000443197 ADAMTS13Q76LX8 1427 aa12.79□□□□□ -0.36
CALD1-210ENST00000443197 AGLP35573 1532 aa12.79□□□□□ -0.36
CALD1-210ENST00000443197 PRAMEF22A3QJZ6 481 aa12.79□□□□□ -0.36
CALD1-210ENST00000443197 RAB11FIP3O75154 756 aa12.79□□□□□ -0.36
CALD1-210ENST00000443197 ZNF496Q96IT1 587 aaPredicted RBP12.79□□□□□ -0.36
CALD1-210ENST00000443197 NGLY1Q96IV0 654 aa12.79□□□□□ -0.36
CALD1-210ENST00000443197 SMC3Q9UQE7 1217 aa12.79□□□□□ -0.36
CALD1-210ENST00000443197 GRM8O00222 908 aa12.78□□□□□ -0.36
CALD1-210ENST00000443197 IL2RBP14784 551 aa12.78□□□□□ -0.36
CALD1-210ENST00000443197 VPS37DQ86XT2 251 aa12.78□□□□□ -0.36
CALD1-210ENST00000443197 AXIN2Q9Y2T1 843 aa12.78□□□□□ -0.36
CALD1-210ENST00000443197 GLRX3O76003 335 aaKnown RBP12.78□□□□□ -0.36
CALD1-210ENST00000443197 CEP126Q9P2H0 1117 aa12.78□□□□□ -0.36
CALD1-210ENST00000443197 TRAK2O60296 914 aa12.78□□□□□ -0.36
CALD1-210ENST00000443197 KLHDC4Q8TBB5 520 aa12.78□□□□□ -0.36
CALD1-210ENST00000443197 DCAF5Q96JK2 942 aa12.78□□□□□ -0.36
CALD1-210ENST00000443197 FAM184AQ8NB25 1140 aa12.77□□□□□ -0.36
CALD1-210ENST00000443197 PNPLA6Q8IY17 1366 aa12.77□□□□□ -0.36
CALD1-210ENST00000443197 CPSF1Q10570 1443 aaKnown RBP12.77□□□□□ -0.36
CALD1-210ENST00000443197 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP12.77□□□□□ -0.36
CALD1-210ENST00000443197 ABCC4O15439 1325 aa12.77□□□□□ -0.36
CALD1-210ENST00000443197 NUCB2P80303 420 aa12.77□□□□□ -0.36
CALD1-210ENST00000443197 ISY1Q9ULR0 285 aaKnown RBP12.77□□□□□ -0.36
CALD1-210ENST00000443197 H3BQV1 296 aa12.77□□□□□ -0.37
CALD1-210ENST00000443197 KDM4AO75164 1064 aa12.77□□□□□ -0.37
CALD1-210ENST00000443197 STK3Q13188 491 aa12.77□□□□□ -0.37
CALD1-210ENST00000443197 IFFO2Q5TF58 517 aa12.77□□□□□ -0.37
CALD1-210ENST00000443197 CDK12Q9NYV4 1490 aaPredicted RBP12.76□□□□□ -0.37
CALD1-210ENST00000443197 CPS1P31327 1500 aa12.76□□□□□ -0.37
CALD1-210ENST00000443197 STK11IPQ8N1F8 1099 aa12.76□□□□□ -0.37
CALD1-210ENST00000443197 LINS1Q8NG48 757 aa12.76□□□□□ -0.37
CALD1-210ENST00000443197 USP16Q9Y5T5 823 aa12.76□□□□□ -0.37
CALD1-210ENST00000443197 JAKMIP1Q96N16 626 aaKnown RBP12.76□□□□□ -0.37
CALD1-210ENST00000443197 ZNF335Q9H4Z2 1342 aaPredicted RBP12.75□□□□□ -0.37
CALD1-210ENST00000443197 LMBR1LQ6UX01 489 aa12.75□□□□□ -0.37
CALD1-210ENST00000443197 DDX21Q9NR30 783 aaKnown RBP eCLIP12.75□□□□□ -0.37
CALD1-210ENST00000443197 ECHDC1Q9NTX5 307 aa12.75□□□□□ -0.37
CALD1-210ENST00000443197 TMEM131LA2VDJ0 1609 aa12.75□□□□□ -0.37
CALD1-210ENST00000443197 A1BGP04217 495 aa12.75□□□□□ -0.37
CALD1-210ENST00000443197 PROSER3Q2NL68 480 aa12.75□□□□□ -0.37
CALD1-210ENST00000443197 TTC39AQ5SRH9 613 aa12.75□□□□□ -0.37
CALD1-210ENST00000443197 PRPF40BQ6NWY9 871 aaKnown RBP12.75□□□□□ -0.37
CALD1-210ENST00000443197 PTPRUQ92729 1446 aa12.75□□□□□ -0.37
CALD1-210ENST00000443197 PRPF40AO75400 957 aaKnown RBP12.75□□□□□ -0.37
CALD1-210ENST00000443197 CCDC158Q5M9N0 1113 aa12.75□□□□□ -0.37
CALD1-210ENST00000443197 USP44Q9H0E7 712 aa12.75□□□□□ -0.37
CALD1-210ENST00000443197 DNAJC5Q9H3Z4 198 aa12.75□□□□□ -0.37
CALD1-210ENST00000443197 SLC52A2Q9HAB3 445 aa12.75□□□□□ -0.37
CALD1-210ENST00000443197 KIAA1210Q9ULL0 1709 aa12.74□□□□□ -0.37
CALD1-210ENST00000443197 SNRKQ9NRH2 765 aa12.74□□□□□ -0.37
CALD1-210ENST00000443197 TRMT112Q9UI30 125 aaKnown RBP12.74□□□□□ -0.37
CALD1-210ENST00000443197 PPLO60437 1756 aa12.74□□□□□ -0.37
CALD1-210ENST00000443197 GIGYF1O75420 1035 aaPredicted RBP12.74□□□□□ -0.37
CALD1-210ENST00000443197 PTMSP20962 102 aa12.74□□□□□ -0.37
CALD1-210ENST00000443197 KIAA0232Q92628 1395 aa12.74□□□□□ -0.37
CALD1-210ENST00000443197 LRRFIP1Q32MZ4 808 aaKnown RBP12.74□□□□□ -0.37
CALD1-210ENST00000443197 SIRT2Q8IXJ6 389 aa12.74□□□□□ -0.37
CALD1-210ENST00000443197 MPHOSPH8Q99549 860 aa12.74□□□□□ -0.37
CALD1-210ENST00000443197 MCM4P33991 863 aa12.73□□□□□ -0.37
CALD1-210ENST00000443197 BICC1Q9H694 974 aaKnown RBP12.73□□□□□ -0.37
CALD1-210ENST00000443197 CASTP20810 708 aaKnown RBP12.73□□□□□ -0.37
CALD1-210ENST00000443197 CWC25Q9NXE8 425 aaPredicted RBP12.73□□□□□ -0.37
CALD1-210ENST00000443197 RICTORQ6R327 1708 aa12.73□□□□□ -0.37
CALD1-210ENST00000443197 TBC1D2BQ9UPU7 963 aa12.73□□□□□ -0.37
CALD1-210ENST00000443197 METTL24Q5JXM2 366 aa12.73□□□□□ -0.37
CALD1-210ENST00000443197 CYP46A1Q9Y6A2 500 aa12.73□□□□□ -0.37
CALD1-210ENST00000443197 UBAP1LF5GYI3 381 aa12.72□□□□□ -0.37
CALD1-210ENST00000443197 ALDH1L1O75891 902 aa12.72□□□□□ -0.37
CALD1-210ENST00000443197 DNTTIP2Q5QJE6 756 aaKnown RBP12.72□□□□□ -0.37
CALD1-210ENST00000443197 LRRC7Q96NW7 1537 aa12.72□□□□□ -0.37
CALD1-210ENST00000443197 ZC3H13Q5T200 1668 aaKnown RBP12.72□□□□□ -0.37
CALD1-210ENST00000443197 PHKG2P15735 406 aa12.72□□□□□ -0.37
CALD1-210ENST00000443197 TRDNQ13061 729 aa12.72□□□□□ -0.37
CALD1-210ENST00000443197 CAVIN1Q6NZI2 390 aaKnown RBP12.72□□□□□ -0.37
CALD1-210ENST00000443197 SYAP1Q96A49 352 aaPredicted RBP12.72□□□□□ -0.37
CALD1-210ENST00000443197 C8orf37Q96NL8 207 aa12.72□□□□□ -0.37
CALD1-210ENST00000443197 RTL1A6NKG5 1358 aa12.71□□□□□ -0.37
CALD1-210ENST00000443197 MYO3AQ8NEV4 1616 aa12.71□□□□□ -0.37
CALD1-210ENST00000443197 HIP1O00291 1037 aa12.71□□□□□ -0.37
CALD1-210ENST00000443197 ERBB3P21860 1342 aa12.71□□□□□ -0.37
CALD1-210ENST00000443197 IFIT5Q13325 482 aaKnown RBP12.71□□□□□ -0.37
CALD1-210ENST00000443197 SKOR2Q2VWA4 1001 aaPredicted RBP12.71□□□□□ -0.37
CALD1-210ENST00000443197 SOS1Q07889 1333 aaPredicted RBP12.71□□□□□ -0.37
CALD1-210ENST00000443197 CPLX1O14810 134 aa12.71□□□□□ -0.38
CALD1-210ENST00000443197 PSMA5P28066 241 aa12.71□□□□□ -0.38
CALD1-210ENST00000443197 DDX46Q7L014 1031 aaKnown RBP12.71□□□□□ -0.38
CALD1-210ENST00000443197 RALYLQ86SE5 291 aaKnown RBP12.71□□□□□ -0.38
CALD1-210ENST00000443197 G3V3G9 751 aa12.7□□□□□ -0.38
CALD1-210ENST00000443197 IDH1O75874 414 aaKnown RBP12.7□□□□□ -0.38
CALD1-210ENST00000443197 SSFA2P28290 1259 aa12.7□□□□□ -0.38
CALD1-210ENST00000443197 DCAF8Q5TAQ9 597 aa12.7□□□□□ -0.38
CALD1-210ENST00000443197 TCEANC2Q96MN5 208 aa12.7□□□□□ -0.38
CALD1-210ENST00000443197 GOLIM4O00461 696 aa12.7□□□□□ -0.38
CALD1-210ENST00000443197 IFIT1P09914 478 aaKnown RBP12.7□□□□□ -0.38
CALD1-210ENST00000443197 FIBPO43427 364 aa12.7□□□□□ -0.38
CALD1-210ENST00000443197 GSPT1P15170 499 aaKnown RBP12.7□□□□□ -0.38
CALD1-210ENST00000443197 MCM2P49736 904 aa12.7□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 189.7 ms