RNA–Protein interactions for RNA: ENST00000443016.1

USP6NL-203, Transcript of USP6 N-terminal like, humanhuman

TSL 2

Gene USP6NL, Length 2,491 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP6NL-203ENST00000443016 INTS5Q6P9B9 1019 aaKnown RBP11.64□□□□□ -0.55
USP6NL-203ENST00000443016 ZNF790Q6PG37 636 aa11.64□□□□□ -0.55
USP6NL-203ENST00000443016 MRC1P22897 1456 aa11.64□□□□□ -0.55
USP6NL-203ENST00000443016 CYP19A1P11511 503 aaPredicted RBP11.63□□□□□ -0.55
USP6NL-203ENST00000443016 SRP68Q9UHB9 627 aaKnown RBP11.63□□□□□ -0.55
USP6NL-203ENST00000443016 COL5A3P25940 1745 aaPredicted RBP11.63□□□□□ -0.55
USP6NL-203ENST00000443016 MYH14Q7Z406 1995 aaKnown RBP11.63□□□□□ -0.55
USP6NL-203ENST00000443016 USP42Q9H9J4 1324 aaKnown RBP11.62□□□□□ -0.55
USP6NL-203ENST00000443016 BTBD11A6QL63 1104 aa11.62□□□□□ -0.55
USP6NL-203ENST00000443016 CANXP27824 592 aaKnown RBP11.62□□□□□ -0.55
USP6NL-203ENST00000443016 ZNF496Q96IT1 587 aaPredicted RBP11.62□□□□□ -0.55
USP6NL-203ENST00000443016 ZBTB1Q9Y2K1 713 aa11.62□□□□□ -0.55
USP6NL-203ENST00000443016 ZNF330Q9Y3S2 320 aaPredicted RBP11.62□□□□□ -0.55
USP6NL-203ENST00000443016 CHD4Q14839 1912 aa11.61□□□□□ -0.55
USP6NL-203ENST00000443016 DDX10Q13206 875 aaKnown RBP11.61□□□□□ -0.55
USP6NL-203ENST00000443016 USPL1Q5W0Q7 1092 aa11.61□□□□□ -0.55
USP6NL-203ENST00000443016 MCM10Q7L590 875 aa11.61□□□□□ -0.55
USP6NL-203ENST00000443016 FMNL2Q96PY5 1086 aa11.61□□□□□ -0.55
USP6NL-203ENST00000443016 TEX13AQ9BXU3 409 aaPredicted RBP11.61□□□□□ -0.55
USP6NL-203ENST00000443016 SOS1Q07889 1333 aaPredicted RBP11.6□□□□□ -0.55
USP6NL-203ENST00000443016 TGFB2P61812 414 aa11.6□□□□□ -0.55
USP6NL-203ENST00000443016 CICQ96RK0 1608 aaPredicted RBP11.6□□□□□ -0.55
USP6NL-203ENST00000443016 KCPQ6ZWJ8 1503 aa11.6□□□□□ -0.55
USP6NL-203ENST00000443016 COL15A1P39059 1388 aa11.6□□□□□ -0.55
USP6NL-203ENST00000443016 TJP1Q07157 1748 aa11.6□□□□□ -0.55
USP6NL-203ENST00000443016 A0A0G2JLW4 131 aa11.6□□□□□ -0.55
USP6NL-203ENST00000443016 BCS1LQ9Y276 419 aa11.6□□□□□ -0.55
USP6NL-203ENST00000443016 CEMIPQ8WUJ3 1361 aa11.59□□□□□ -0.55
USP6NL-203ENST00000443016 HEG1Q9ULI3 1381 aa11.59□□□□□ -0.55
USP6NL-203ENST00000443016 DCTN1Q14203 1278 aa11.59□□□□□ -0.55
USP6NL-203ENST00000443016 NARFQ9UHQ1 456 aa11.59□□□□□ -0.55
USP6NL-203ENST00000443016 ADAMTS7Q9UKP4 1686 aa11.59□□□□□ -0.55
USP6NL-203ENST00000443016 PNNQ9H307 717 aaKnown RBP11.59□□□□□ -0.55
USP6NL-203ENST00000443016 VIRMAQ69YN4 1812 aaKnown RBP11.59□□□□□ -0.55
USP6NL-203ENST00000443016 RALBP1Q15311 655 aa11.58□□□□□ -0.56
USP6NL-203ENST00000443016 MAPK8IP3Q9UPT6 1336 aa11.58□□□□□ -0.56
USP6NL-203ENST00000443016 HTATSF1O43719 755 aaKnown RBP11.58□□□□□ -0.56
USP6NL-203ENST00000443016 DPEP1P16444 411 aa11.58□□□□□ -0.56
USP6NL-203ENST00000443016 DDR1Q08345 913 aa11.58□□□□□ -0.56
USP6NL-203ENST00000443016 DIEXFQ68CQ4 756 aaKnown RBP11.58□□□□□ -0.56
USP6NL-203ENST00000443016 C4AP0C0L4 1744 aa11.57□□□□□ -0.56
USP6NL-203ENST00000443016 A0A087WZG4 1122 aa11.57□□□□□ -0.56
USP6NL-203ENST00000443016 KCNQ3O43525 872 aa11.57□□□□□ -0.56
USP6NL-203ENST00000443016 C10orf71Q711Q0 1435 aa11.57□□□□□ -0.56
USP6NL-203ENST00000443016 BICDL1Q6ZP65 573 aa11.57□□□□□ -0.56
USP6NL-203ENST00000443016 PXDNLA1KZ92 1463 aa11.56□□□□□ -0.56
USP6NL-203ENST00000443016 POLRMTO00411 1230 aaKnown RBP11.56□□□□□ -0.56
USP6NL-203ENST00000443016 A1BGP04217 495 aa11.56□□□□□ -0.56
USP6NL-203ENST00000443016 TM4SF1P30408 202 aa11.56□□□□□ -0.56
USP6NL-203ENST00000443016 EIF5P55010 431 aaKnown RBP11.56□□□□□ -0.56
USP6NL-203ENST00000443016 NFIXQ14938 502 aa11.56□□□□□ -0.56
USP6NL-203ENST00000443016 TBC1D2BQ9UPU7 963 aa11.56□□□□□ -0.56
USP6NL-203ENST00000443016 NBR1Q14596 966 aa11.55□□□□□ -0.56
USP6NL-203ENST00000443016 TAF7Q15545 349 aaPredicted RBP11.55□□□□□ -0.56
USP6NL-203ENST00000443016 PIM2Q9P1W9 311 aa11.55□□□□□ -0.56
USP6NL-203ENST00000443016 SNRPA1P09661 255 aaKnown RBP11.55□□□□□ -0.56
USP6NL-203ENST00000443016 IL6STP40189 918 aaPredicted RBP11.55□□□□□ -0.56
USP6NL-203ENST00000443016 UBR2Q8IWV8 1755 aa11.55□□□□□ -0.56
USP6NL-203ENST00000443016 NPHP1O15259 732 aa11.54□□□□□ -0.56
USP6NL-203ENST00000443016 GIGYF1O75420 1035 aaPredicted RBP11.54□□□□□ -0.56
USP6NL-203ENST00000443016 ARHGAP27Q6ZUM4 889 aa11.54□□□□□ -0.56
USP6NL-203ENST00000443016 MIS18AQ9NYP9 233 aa11.54□□□□□ -0.56
USP6NL-203ENST00000443016 USP16Q9Y5T5 823 aa11.54□□□□□ -0.56
USP6NL-203ENST00000443016 SERPINB2P05120 415 aa11.54□□□□□ -0.56
USP6NL-203ENST00000443016 ZNF526Q8TF50 670 aaPredicted RBP11.54□□□□□ -0.56
USP6NL-203ENST00000443016 CHRNA5P30532 468 aa11.53□□□□□ -0.56
USP6NL-203ENST00000443016 PIP4K2AP48426 406 aaPredicted RBP11.53□□□□□ -0.56
USP6NL-203ENST00000443016 NFE2L2Q16236 605 aa11.53□□□□□ -0.56
USP6NL-203ENST00000443016 DALRD3Q5D0E6 543 aaKnown RBP11.53□□□□□ -0.56
USP6NL-203ENST00000443016 PLEKHF1Q96S99 279 aa11.53□□□□□ -0.56
USP6NL-203ENST00000443016 BCL2L12Q9HB09 334 aa11.53□□□□□ -0.56
USP6NL-203ENST00000443016 GPBP1L1Q9HC44 474 aaPredicted RBP11.53□□□□□ -0.56
USP6NL-203ENST00000443016 PRAMEF22A3QJZ6 481 aa11.53□□□□□ -0.56
USP6NL-203ENST00000443016 CEP350Q5VT06 3117 aa11.53□□□□□ -0.56
USP6NL-203ENST00000443016 MYBBP1AQ9BQG0 1328 aaKnown RBP11.53□□□□□ -0.56
USP6NL-203ENST00000443016 DZIP3Q86Y13 1208 aaKnown RBP11.52□□□□□ -0.56
USP6NL-203ENST00000443016 PNISRQ8TF01 805 aaKnown RBP11.52□□□□□ -0.56
USP6NL-203ENST00000443016 ATP10DQ9P241 1426 aa11.52□□□□□ -0.56
USP6NL-203ENST00000443016 N4BP2Q86UW6 1770 aaPredicted RBP11.52□□□□□ -0.56
USP6NL-203ENST00000443016 SIPA1L3O60292 1781 aaPredicted RBP11.52□□□□□ -0.57
USP6NL-203ENST00000443016 KCNA3P22001 575 aa11.52□□□□□ -0.57
USP6NL-203ENST00000443016 THUMPD2Q9BTF0 503 aaKnown RBP11.52□□□□□ -0.57
USP6NL-203ENST00000443016 WDR43Q15061 677 aaKnown RBP eCLIP11.51□□□□□ -0.57
USP6NL-203ENST00000443016 TBC1D9BQ66K14 1250 aa11.51□□□□□ -0.57
USP6NL-203ENST00000443016 SETDB2Q96T68 719 aa11.51□□□□□ -0.57
USP6NL-203ENST00000443016 KIF13BQ9NQT8 1826 aa11.51□□□□□ -0.57
USP6NL-203ENST00000443016 RIPK4P57078 832 aa11.51□□□□□ -0.57
USP6NL-203ENST00000443016 C1QTNF8P60827 252 aa11.51□□□□□ -0.57
USP6NL-203ENST00000443016 H0YIN7 160 aa11.5□□□□□ -0.57
USP6NL-203ENST00000443016 ANP32CO43423 234 aa11.5□□□□□ -0.57
USP6NL-203ENST00000443016 NEUROD2Q15784 382 aa11.5□□□□□ -0.57
USP6NL-203ENST00000443016 ZNF652Q9Y2D9 606 aa11.5□□□□□ -0.57
USP6NL-203ENST00000443016 CARMIL3Q8ND23 1372 aa11.49□□□□□ -0.57
USP6NL-203ENST00000443016 CAMTA2O94983 1202 aa11.49□□□□□ -0.57
USP6NL-203ENST00000443016 C2CD5Q86YS7 1000 aa11.49□□□□□ -0.57
USP6NL-203ENST00000443016 CCDC146Q8IYE0 955 aa11.49□□□□□ -0.57
USP6NL-203ENST00000443016 CCDC24Q8N4L8 307 aa11.49□□□□□ -0.57
USP6NL-203ENST00000443016 CNBD1Q8NA66 436 aa11.49□□□□□ -0.57
USP6NL-203ENST00000443016 TSPYL4Q9UJ04 414 aa11.49□□□□□ -0.57
USP6NL-203ENST00000443016 LMOD3Q0VAK6 560 aa11.48□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms