RNA–Protein interactions for RNA: ENST00000442842.5

TM9SF4-204, Transcript of transmembrane 9 superfamily member 4, humanhuman

TSL 4

Gene TM9SF4, Length 563 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF4-204ENST00000442842 HOXB7P09629 217 aa17.49■□□□□ 0.39
TM9SF4-204ENST00000442842 CYP19A1P11511 503 aaPredicted RBP17.49■□□□□ 0.39
TM9SF4-204ENST00000442842 PIP4K2AP48426 406 aaPredicted RBP17.49■□□□□ 0.39
TM9SF4-204ENST00000442842 AK7Q96M32 723 aa17.49■□□□□ 0.39
TM9SF4-204ENST00000442842 TEX13AQ9BXU3 409 aaPredicted RBP17.49■□□□□ 0.39
TM9SF4-204ENST00000442842 C4BP0C0L5 1744 aa17.49■□□□□ 0.39
TM9SF4-204ENST00000442842 TCERG1O14776 1098 aaKnown RBP17.48■□□□□ 0.39
TM9SF4-204ENST00000442842 CRKLP46109 303 aaKnown RBP17.48■□□□□ 0.39
TM9SF4-204ENST00000442842 ZBTB1Q9Y2K1 713 aa17.48■□□□□ 0.39
TM9SF4-204ENST00000442842 ZNF330Q9Y3S2 320 aaPredicted RBP17.48■□□□□ 0.39
TM9SF4-204ENST00000442842 A1BGP04217 495 aa17.47■□□□□ 0.39
TM9SF4-204ENST00000442842 CANXP27824 592 aaKnown RBP17.47■□□□□ 0.39
TM9SF4-204ENST00000442842 ZNF827Q17R98 1081 aa17.47■□□□□ 0.39
TM9SF4-204ENST00000442842 CCDC87Q9NVE4 849 aa17.47■□□□□ 0.39
TM9SF4-204ENST00000442842 CNTNAP4Q9C0A0 1308 aa17.47■□□□□ 0.39
TM9SF4-204ENST00000442842 GNPATO15228 680 aa17.46■□□□□ 0.39
TM9SF4-204ENST00000442842 ANO8Q9HCE9 1232 aaPredicted RBP17.46■□□□□ 0.39
TM9SF4-204ENST00000442842 SOS1Q07889 1333 aaPredicted RBP17.46■□□□□ 0.38
TM9SF4-204ENST00000442842 TAF1LQ8IZX4 1826 aa17.45■□□□□ 0.38
TM9SF4-204ENST00000442842 PHF14O94880 888 aa17.45■□□□□ 0.38
TM9SF4-204ENST00000442842 ANXA1P04083 346 aa17.45■□□□□ 0.38
TM9SF4-204ENST00000442842 MYL6BP14649 208 aa17.45■□□□□ 0.38
TM9SF4-204ENST00000442842 STK32BQ9NY57 414 aa17.45■□□□□ 0.38
TM9SF4-204ENST00000442842 CHPF2Q9P2E5 772 aa17.45■□□□□ 0.38
TM9SF4-204ENST00000442842 VAMP4O75379 141 aa17.44■□□□□ 0.38
TM9SF4-204ENST00000442842 CCDC30Q5VVM6 783 aa17.44■□□□□ 0.38
TM9SF4-204ENST00000442842 INTS5Q6P9B9 1019 aaKnown RBP17.44■□□□□ 0.38
TM9SF4-204ENST00000442842 STK31Q9BXU1 1019 aa17.44■□□□□ 0.38
TM9SF4-204ENST00000442842 SOCS7O14512 581 aa17.43■□□□□ 0.38
TM9SF4-204ENST00000442842 PROSER3Q2NL68 480 aa17.43■□□□□ 0.38
TM9SF4-204ENST00000442842 SMIM5Q71RC9 77 aa17.43■□□□□ 0.38
TM9SF4-204ENST00000442842 BCL2L13Q9BXK5 485 aa17.43■□□□□ 0.38
TM9SF4-204ENST00000442842 TFCP2L1Q9NZI6 479 aa17.43■□□□□ 0.38
TM9SF4-204ENST00000442842 HMGB2P26583 209 aaKnown RBP17.42■□□□□ 0.38
TM9SF4-204ENST00000442842 AKT1S1Q96B36 256 aa17.42■□□□□ 0.38
TM9SF4-204ENST00000442842 ERBB4Q15303 1308 aa17.42■□□□□ 0.38
TM9SF4-204ENST00000442842 NBPF26B4DH59 902 aa17.41■□□□□ 0.38
TM9SF4-204ENST00000442842 CT47B1P0C2W7 299 aaPredicted RBP17.41■□□□□ 0.38
TM9SF4-204ENST00000442842 RC3H1Q5TC82 1133 aaKnown RBP17.41■□□□□ 0.38
TM9SF4-204ENST00000442842 NBPF14Q5TI25 921 aa17.41■□□□□ 0.38
TM9SF4-204ENST00000442842 NBPF10Q6P3W6 841 aaKnown RBP17.41■□□□□ 0.38
TM9SF4-204ENST00000442842 NPM2Q86SE8 214 aaKnown RBP17.41■□□□□ 0.38
TM9SF4-204ENST00000442842 NBPF15Q8N660 670 aa17.41■□□□□ 0.38
TM9SF4-204ENST00000442842 ARXQ96QS3 562 aa17.41■□□□□ 0.38
TM9SF4-204ENST00000442842 CHMP4AQ9BY43 222 aa17.41■□□□□ 0.38
TM9SF4-204ENST00000442842 SMC4Q9NTJ3 1288 aa17.41■□□□□ 0.38
TM9SF4-204ENST00000442842 DBF4Q9UBU7 674 aaPredicted RBP17.41■□□□□ 0.38
TM9SF4-204ENST00000442842 RTCBQ9Y3I0 505 aaKnown RBP17.41■□□□□ 0.38
TM9SF4-204ENST00000442842 COL15A1P39059 1388 aa17.4■□□□□ 0.38
TM9SF4-204ENST00000442842 SLC15A2Q16348 729 aa17.4■□□□□ 0.38
TM9SF4-204ENST00000442842 AMIGO3Q86WK7 504 aa17.4■□□□□ 0.38
TM9SF4-204ENST00000442842 DDX21Q9NR30 783 aaKnown RBP eCLIP17.4■□□□□ 0.38
TM9SF4-204ENST00000442842 MSH5O43196 834 aa17.39■□□□□ 0.37
TM9SF4-204ENST00000442842 RPS6KA4O75676 772 aa17.39■□□□□ 0.37
TM9SF4-204ENST00000442842 IL6STP40189 918 aaPredicted RBP17.39■□□□□ 0.37
TM9SF4-204ENST00000442842 SSH1Q8WYL5 1049 aa17.39■□□□□ 0.37
TM9SF4-204ENST00000442842 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP17.38■□□□□ 0.37
TM9SF4-204ENST00000442842 SLC4A2P04920 1241 aa17.38■□□□□ 0.37
TM9SF4-204ENST00000442842 AIMP1Q12904 312 aaKnown RBP17.38■□□□□ 0.37
TM9SF4-204ENST00000442842 PDIA6Q15084 440 aa17.38■□□□□ 0.37
TM9SF4-204ENST00000442842 TUBGCP6Q96RT7 1819 aa17.37■□□□□ 0.37
TM9SF4-204ENST00000442842 SSFA2P28290 1259 aa17.37■□□□□ 0.37
TM9SF4-204ENST00000442842 RARSP54136 660 aaKnown RBP17.37■□□□□ 0.37
TM9SF4-204ENST00000442842 ALDH1L2Q3SY69 923 aa17.37■□□□□ 0.37
TM9SF4-204ENST00000442842 XAGE3Q8WTP9 111 aa17.37■□□□□ 0.37
TM9SF4-204ENST00000442842 ZNF428Q96B54 188 aa17.37■□□□□ 0.37
TM9SF4-204ENST00000442842 PHAXQ9H814 394 aaKnown RBP17.37■□□□□ 0.37
TM9SF4-204ENST00000442842 HYPKQ9NX55 129 aa17.37■□□□□ 0.37
TM9SF4-204ENST00000442842 UBR3Q6ZT12 1888 aa17.36■□□□□ 0.37
TM9SF4-204ENST00000442842 EIF5P55010 431 aaKnown RBP17.36■□□□□ 0.37
TM9SF4-204ENST00000442842 R3HDM1Q15032 1099 aaKnown RBP17.36■□□□□ 0.37
TM9SF4-204ENST00000442842 TRAPPC3LQ5T215 181 aa17.36■□□□□ 0.37
TM9SF4-204ENST00000442842 KIF6Q6ZMV9 814 aa17.36■□□□□ 0.37
TM9SF4-204ENST00000442842 MRPL50Q8N5N7 158 aaKnown RBP17.36■□□□□ 0.37
TM9SF4-204ENST00000442842 PNPLA7Q6ZV29 1317 aa17.36■□□□□ 0.37
TM9SF4-204ENST00000442842 MYH14Q7Z406 1995 aaKnown RBP17.35■□□□□ 0.37
TM9SF4-204ENST00000442842 RFC4P35249 363 aa17.35■□□□□ 0.37
TM9SF4-204ENST00000442842 TTLL7Q6ZT98 887 aa17.35■□□□□ 0.37
TM9SF4-204ENST00000442842 COPS6Q7L5N1 327 aa17.35■□□□□ 0.37
TM9SF4-204ENST00000442842 G2E3Q7L622 706 aa17.35■□□□□ 0.37
TM9SF4-204ENST00000442842 DZIP3Q86Y13 1208 aaKnown RBP17.35■□□□□ 0.37
TM9SF4-204ENST00000442842 RCAN3Q9UKA8 241 aa17.35■□□□□ 0.37
TM9SF4-204ENST00000442842 TBC1D2BQ9UPU7 963 aa17.35■□□□□ 0.37
TM9SF4-204ENST00000442842 A0A087WZG4 1122 aa17.34■□□□□ 0.37
TM9SF4-204ENST00000442842 PSDA5PKW4 1024 aaPredicted RBP17.34■□□□□ 0.37
TM9SF4-204ENST00000442842 BCAR3O75815 825 aa17.34■□□□□ 0.37
TM9SF4-204ENST00000442842 C4AP0C0L4 1744 aa17.34■□□□□ 0.37
TM9SF4-204ENST00000442842 ADRA2BP18089 450 aa17.34■□□□□ 0.37
TM9SF4-204ENST00000442842 LRP10Q7Z4F1 713 aa17.34■□□□□ 0.37
TM9SF4-204ENST00000442842 ARHGEF1Q92888 912 aaKnown RBP17.34■□□□□ 0.37
TM9SF4-204ENST00000442842 ZBTB3Q9H5J0 574 aa17.34■□□□□ 0.37
TM9SF4-204ENST00000442842 SRP68Q9UHB9 627 aaKnown RBP17.34■□□□□ 0.37
TM9SF4-204ENST00000442842 FLIIQ13045 1269 aa17.33■□□□□ 0.36
TM9SF4-204ENST00000442842 FKBP5Q13451 457 aaPredicted RBP17.33■□□□□ 0.36
TM9SF4-204ENST00000442842 COL23A1Q86Y22 540 aaPredicted RBP17.33■□□□□ 0.36
TM9SF4-204ENST00000442842 FRAT1Q92837 279 aaPredicted RBP17.33■□□□□ 0.36
TM9SF4-204ENST00000442842 SCN7AQ01118 1682 aa17.32■□□□□ 0.36
TM9SF4-204ENST00000442842 KIF16BQ96L93 1317 aa17.32■□□□□ 0.36
TM9SF4-204ENST00000442842 USPL1Q5W0Q7 1092 aa17.32■□□□□ 0.36
TM9SF4-204ENST00000442842 FLAD1Q8NFF5 587 aa17.32■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms