RNA–Protein interactions for RNA: ENST00000441310.6

PMS1-213, Transcript of PMS1 homolog 1, mismatch repair system component, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PMS1, Length 3,225 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMS1-213ENST00000441310 SMARCA5O60264 1052 aaPredicted RBP20.23■□□□□ 0.83
PMS1-213ENST00000441310 PHF14O94880 888 aa20.23■□□□□ 0.83
PMS1-213ENST00000441310 SSH2Q76I76 1423 aa20.23■□□□□ 0.83
PMS1-213ENST00000441310 C16orf71Q8IYS4 520 aaPredicted RBP20.23■□□□□ 0.83
PMS1-213ENST00000441310 PLEKHM2Q8IWE5 1019 aa20.23■□□□□ 0.83
PMS1-213ENST00000441310 PTCH1Q13635 1447 aa20.22■□□□□ 0.83
PMS1-213ENST00000441310 PHF8Q9UPP1 1060 aa20.22■□□□□ 0.83
PMS1-213ENST00000441310 SPC24Q8NBT2 197 aa20.22■□□□□ 0.83
PMS1-213ENST00000441310 DLG5Q8TDM6 1919 aa20.22■□□□□ 0.83
PMS1-213ENST00000441310 UVSSAQ2YD98 709 aa20.21■□□□□ 0.83
PMS1-213ENST00000441310 INTS3Q68E01 1043 aaKnown RBP20.21■□□□□ 0.83
PMS1-213ENST00000441310 USP31Q70CQ4 1352 aa20.21■□□□□ 0.83
PMS1-213ENST00000441310 FAM184AQ8NB25 1140 aa20.21■□□□□ 0.83
PMS1-213ENST00000441310 RTF1Q92541 710 aaKnown RBP20.21■□□□□ 0.83
PMS1-213ENST00000441310 KIAA1524Q8TCG1 905 aa20.21■□□□□ 0.83
PMS1-213ENST00000441310 NCBP1Q09161 790 aaKnown RBP20.2■□□□□ 0.82
PMS1-213ENST00000441310 NECTIN2Q92692 538 aa20.2■□□□□ 0.82
PMS1-213ENST00000441310 RIMS1Q86UR5 1692 aaKnown RBP20.2■□□□□ 0.82
PMS1-213ENST00000441310 SETD1BQ9UPS6 1966 aaKnown RBP20.2■□□□□ 0.82
PMS1-213ENST00000441310 PEAK1Q9H792 1746 aa20.2■□□□□ 0.82
PMS1-213ENST00000441310 FLT4P35916 1363 aa20.2■□□□□ 0.82
PMS1-213ENST00000441310 NEK4P51957 841 aa20.19■□□□□ 0.82
PMS1-213ENST00000441310 PSME1Q06323 249 aa20.19■□□□□ 0.82
PMS1-213ENST00000441310 TTC22Q5TAA0 569 aa20.19■□□□□ 0.82
PMS1-213ENST00000441310 TMX3Q96JJ7 454 aa20.19■□□□□ 0.82
PMS1-213ENST00000441310 APBB1O00213 710 aa20.19■□□□□ 0.82
PMS1-213ENST00000441310 BRD1O95696 1058 aa20.19■□□□□ 0.82
PMS1-213ENST00000441310 SLFN14P0C7P3 912 aa20.19■□□□□ 0.82
PMS1-213ENST00000441310 KCNF1Q9H3M0 494 aa20.19■□□□□ 0.82
PMS1-213ENST00000441310 CTIFO43310 598 aaKnown RBP20.19■□□□□ 0.82
PMS1-213ENST00000441310 GABPB1Q06547 395 aaPredicted RBP20.19■□□□□ 0.82
PMS1-213ENST00000441310 NAA30Q147X3 362 aaPredicted RBP20.19■□□□□ 0.82
PMS1-213ENST00000441310 CEP170BQ9Y4F5 1589 aaPredicted RBP20.19■□□□□ 0.82
PMS1-213ENST00000441310 OTUD7AQ8TE49 926 aaPredicted RBP20.18■□□□□ 0.82
PMS1-213ENST00000441310 CHL1O00533 1208 aa20.18■□□□□ 0.82
PMS1-213ENST00000441310 HOXC9P31274 260 aa20.18■□□□□ 0.82
PMS1-213ENST00000441310 USP48Q86UV5 1035 aa20.18■□□□□ 0.82
PMS1-213ENST00000441310 ZNF428Q96B54 188 aa20.18■□□□□ 0.82
PMS1-213ENST00000441310 ORAI2Q96SN7 254 aa20.18■□□□□ 0.82
PMS1-213ENST00000441310 CTNNA3Q9UI47 895 aa20.18■□□□□ 0.82
PMS1-213ENST00000441310 TOPAZ1Q8N9V7 1692 aa20.18■□□□□ 0.82
PMS1-213ENST00000441310 ERICH4A6NGS2 130 aa20.17■□□□□ 0.82
PMS1-213ENST00000441310 TSPYL4Q9UJ04 414 aa20.17■□□□□ 0.82
PMS1-213ENST00000441310 SBNO1A3KN83 1393 aa20.17■□□□□ 0.82
PMS1-213ENST00000441310 NRKQ7Z2Y5 1582 aa20.17■□□□□ 0.82
PMS1-213ENST00000441310 CHMP4AQ9BY43 222 aa20.16■□□□□ 0.82
PMS1-213ENST00000441310 KDM4AO75164 1064 aa20.16■□□□□ 0.82
PMS1-213ENST00000441310 TAF7LQ5H9L4 462 aa20.15■□□□□ 0.82
PMS1-213ENST00000441310 SDSP20132 328 aa20.15■□□□□ 0.82
PMS1-213ENST00000441310 CASC1Q6TDU7 716 aa20.15■□□□□ 0.82
PMS1-213ENST00000441310 CCDC66A2RUB6 948 aa20.14■□□□□ 0.82
PMS1-213ENST00000441310 SLC4A2P04920 1241 aa20.14■□□□□ 0.82
PMS1-213ENST00000441310 PAXIP1Q6ZW49 1069 aaPredicted RBP20.14■□□□□ 0.81
PMS1-213ENST00000441310 TRERF1Q96PN7 1200 aa20.14■□□□□ 0.81
PMS1-213ENST00000441310 AP5Z1O43299 807 aa20.13■□□□□ 0.81
PMS1-213ENST00000441310 SLC4A10Q6U841 1118 aa20.13■□□□□ 0.81
PMS1-213ENST00000441310 ARHGAP45Q92619 1136 aa20.13■□□□□ 0.81
PMS1-213ENST00000441310 API5Q9BZZ5 524 aaKnown RBP20.13■□□□□ 0.81
PMS1-213ENST00000441310 DDX41Q9UJV9 622 aaKnown RBP20.13■□□□□ 0.81
PMS1-213ENST00000441310 BRPF1P55201 1214 aaPredicted RBP20.13■□□□□ 0.81
PMS1-213ENST00000441310 CCDC183Q5T5S1 534 aa20.13■□□□□ 0.81
PMS1-213ENST00000441310 C16orf45Q96MC5 204 aaPredicted RBP20.13■□□□□ 0.81
PMS1-213ENST00000441310 TIGD1Q96MW7 591 aa20.13■□□□□ 0.81
PMS1-213ENST00000441310 F6X3S4 739 aa20.12■□□□□ 0.81
PMS1-213ENST00000441310 G2E3Q7L622 706 aa20.12■□□□□ 0.81
PMS1-213ENST00000441310 IGSF1Q8N6C5 1336 aa20.12■□□□□ 0.81
PMS1-213ENST00000441310 REC8O95072 547 aa20.12■□□□□ 0.81
PMS1-213ENST00000441310 TERF2Q15554 542 aa20.12■□□□□ 0.81
PMS1-213ENST00000441310 ABCC4O15439 1325 aa20.11■□□□□ 0.81
PMS1-213ENST00000441310 PIK3R4Q99570 1358 aa20.1■□□□□ 0.81
PMS1-213ENST00000441310 ARHGEF10O15013 1369 aa20.1■□□□□ 0.81
PMS1-213ENST00000441310 AEBP2Q6ZN18 517 aaPredicted RBP20.1■□□□□ 0.81
PMS1-213ENST00000441310 LRRC59Q96AG4 307 aaKnown RBP20.1■□□□□ 0.81
PMS1-213ENST00000441310 PIK3C2AO00443 1686 aa20.1■□□□□ 0.81
PMS1-213ENST00000441310 GIMAP6Q6P9H5 292 aa20.1■□□□□ 0.81
PMS1-213ENST00000441310 XRN1Q8IZH2 1706 aaKnown RBP20.1■□□□□ 0.81
PMS1-213ENST00000441310 PROSER2Q86WR7 435 aaPredicted RBP20.09■□□□□ 0.81
PMS1-213ENST00000441310 PTGS1P23219 599 aa20.09■□□□□ 0.81
PMS1-213ENST00000441310 MX1P20591 662 aa20.08■□□□□ 0.8
PMS1-213ENST00000441310 DNAJC2Q99543 621 aaKnown RBP20.08■□□□□ 0.8
PMS1-213ENST00000441310 CNPY2Q9Y2B0 182 aa20.08■□□□□ 0.8
PMS1-213ENST00000441310 ERC2O15083 957 aa20.08■□□□□ 0.8
PMS1-213ENST00000441310 KIF18AQ8NI77 898 aa20.08■□□□□ 0.8
PMS1-213ENST00000441310 CRB1P82279 1406 aa20.07■□□□□ 0.8
PMS1-213ENST00000441310 ANKARQ7Z5J8 1434 aa20.07■□□□□ 0.8
PMS1-213ENST00000441310 NBPF6Q5VWK0 638 aa20.07■□□□□ 0.8
PMS1-213ENST00000441310 IL17REQ8NFR9 667 aa20.07■□□□□ 0.8
PMS1-213ENST00000441310 NBPF4Q96M43 638 aa20.07■□□□□ 0.8
PMS1-213ENST00000441310 MORC2Q9Y6X9 1032 aaPredicted RBP20.07■□□□□ 0.8
PMS1-213ENST00000441310 GNAT3A8MTJ3 354 aa20.07■□□□□ 0.8
PMS1-213ENST00000441310 CERS3Q8IU89 383 aa20.07■□□□□ 0.8
PMS1-213ENST00000441310 GOLGA6L6A8MZA4 724 aa20.06■□□□□ 0.8
PMS1-213ENST00000441310 KRT222Q8N1A0 295 aa20.06■□□□□ 0.8
PMS1-213ENST00000441310 DDX17Q92841 729 aaKnown RBP20.06■□□□□ 0.8
PMS1-213ENST00000441310 MEIS3Q99687 375 aa20.06■□□□□ 0.8
PMS1-213ENST00000441310 NALCNQ8IZF0 1738 aa20.05■□□□□ 0.8
PMS1-213ENST00000441310 TNNT1P13805 278 aa20.05■□□□□ 0.8
PMS1-213ENST00000441310 CAPN2P17655 700 aa20.05■□□□□ 0.8
PMS1-213ENST00000441310 ZNF592Q92610 1267 aa20.05■□□□□ 0.8
PMS1-213ENST00000441310 DCTPP1Q9H773 170 aa20.05■□□□□ 0.8
Retrieved 100 of 20,778 RNA–protein pairs in 317 ms