RNA–Protein interactions for RNA: ENST00000441080.2

PFDN4-202, Transcript of prefoldin subunit 4, humanhuman

TSL 5

Gene PFDN4, Length 579 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PFDN4-202ENST00000441080 POU4F2Q12837 409 aa9.02□□□□□ -0.97
PFDN4-202ENST00000441080 PHLDB3Q6NSJ2 640 aa9.02□□□□□ -0.97
PFDN4-202ENST00000441080 ZNF295-AS1Q8N0V1 137 aa9.02□□□□□ -0.97
PFDN4-202ENST00000441080 STAG2Q8N3U4 1231 aa9.02□□□□□ -0.97
PFDN4-202ENST00000441080 ZDHHC1Q8WTX9 485 aa9.02□□□□□ -0.97
PFDN4-202ENST00000441080 GMPR2Q9P2T1 348 aaKnown RBP9.02□□□□□ -0.97
PFDN4-202ENST00000441080 SERTM1A2A2V5 107 aa9.01□□□□□ -0.97
PFDN4-202ENST00000441080 LCE2BO14633 110 aa9.01□□□□□ -0.97
PFDN4-202ENST00000441080 RHOQP17081 205 aa9.01□□□□□ -0.97
PFDN4-202ENST00000441080 NOS2P35228 1153 aa9.01□□□□□ -0.97
PFDN4-202ENST00000441080 PHKA2P46019 1235 aa9.01□□□□□ -0.97
PFDN4-202ENST00000441080 TEAD4Q15561 434 aa9.01□□□□□ -0.97
PFDN4-202ENST00000441080 ZNF800Q2TB10 664 aaPredicted RBP eCLIP9.01□□□□□ -0.972e-10■■■■□ 19.8
PFDN4-202ENST00000441080 NBPF10Q6P3W6 841 aaKnown RBP9.01□□□□□ -0.97
PFDN4-202ENST00000441080 AEBP1Q8IUX7 1158 aa9.01□□□□□ -0.97
PFDN4-202ENST00000441080 KCTD17Q8N5Z5 321 aa9.01□□□□□ -0.97
PFDN4-202ENST00000441080 C1orf216Q8TAB5 229 aa9.01□□□□□ -0.97
PFDN4-202ENST00000441080 L3MBTL2Q969R5 705 aa9.01□□□□□ -0.97
PFDN4-202ENST00000441080 MKNK1Q9BUB5 465 aa9.01□□□□□ -0.97
PFDN4-202ENST00000441080 C2orf49Q9BVC5 232 aaPredicted RBP9.01□□□□□ -0.97
PFDN4-202ENST00000441080 PARP3Q9Y6F1 533 aa9.01□□□□□ -0.97
PFDN4-202ENST00000441080 TRIM47Q96LD4 638 aa9□□□□□ -0.97
PFDN4-202ENST00000441080 SOBPA7XYQ1 873 aa8.99□□□□□ -0.97
PFDN4-202ENST00000441080 EML1O00423 815 aa8.99□□□□□ -0.97
PFDN4-202ENST00000441080 PTCD1O75127 700 aaKnown RBP8.99□□□□□ -0.97
PFDN4-202ENST00000441080 KCNA1Q09470 495 aa8.99□□□□□ -0.97
PFDN4-202ENST00000441080 WDR44Q5JSH3 913 aa8.99□□□□□ -0.97
PFDN4-202ENST00000441080 SH3PXD2AQ5TCZ1 1133 aa8.99□□□□□ -0.97
PFDN4-202ENST00000441080 SCNN1AP37088 669 aa8.98□□□□□ -0.97
PFDN4-202ENST00000441080 HIRAP54198 1017 aaPredicted RBP8.98□□□□□ -0.97
PFDN4-202ENST00000441080 NBPF1Q3BBV0 1214 aa8.98□□□□□ -0.97
PFDN4-202ENST00000441080 POTEAQ6S8J7 498 aa8.98□□□□□ -0.97
PFDN4-202ENST00000441080 TIMMDC1Q9NPL8 285 aa8.98□□□□□ -0.97
PFDN4-202ENST00000441080 MTMR7Q9Y216 660 aa8.98□□□□□ -0.97
PFDN4-202ENST00000441080 PATL2C9JE40 543 aaKnown RBP8.97□□□□□ -0.97
PFDN4-202ENST00000441080 ARID4AP29374 1257 aaPredicted RBP8.97□□□□□ -0.97
PFDN4-202ENST00000441080 COL26A1Q96A83 441 aa8.97□□□□□ -0.97
PFDN4-202ENST00000441080 AIDAQ96BJ3 306 aa8.97□□□□□ -0.97
PFDN4-202ENST00000441080 NGLY1Q96IV0 654 aa8.97□□□□□ -0.97
PFDN4-202ENST00000441080 UTP3Q9NQZ2 479 aaKnown RBP eCLIP8.97□□□□□ -0.97
PFDN4-202ENST00000441080 C11orf95C9JLR9 678 aaPredicted RBP8.96□□□□□ -0.98
PFDN4-202ENST00000441080 CAPN12Q6ZSI9 719 aa8.96□□□□□ -0.98
PFDN4-202ENST00000441080 HCN4Q9Y3Q4 1203 aa8.96□□□□□ -0.98
PFDN4-202ENST00000441080 A0A1B0GTH6 734 aa8.95□□□□□ -0.98
PFDN4-202ENST00000441080 SNRPBP14678 240 aaKnown RBP8.95□□□□□ -0.98
PFDN4-202ENST00000441080 TXLNAP40222 546 aa8.95□□□□□ -0.98
PFDN4-202ENST00000441080 ALDH16A1Q8IZ83 802 aa8.95□□□□□ -0.98
PFDN4-202ENST00000441080 CCER1Q8TC90 406 aaPredicted RBP8.95□□□□□ -0.98
PFDN4-202ENST00000441080 PHACTR1Q9C0D0 580 aa8.95□□□□□ -0.98
PFDN4-202ENST00000441080 ZDHHC3Q9NYG2 299 aa8.95□□□□□ -0.98
PFDN4-202ENST00000441080 SEPT3Q9UH03 358 aa8.95□□□□□ -0.98
PFDN4-202ENST00000441080 TATP17735 454 aaPredicted RBP8.94□□□□□ -0.98
PFDN4-202ENST00000441080 NAA30Q147X3 362 aaPredicted RBP8.94□□□□□ -0.98
PFDN4-202ENST00000441080 TXNDC2Q86VQ3 553 aa8.94□□□□□ -0.98
PFDN4-202ENST00000441080 IVNS1ABPQ9Y6Y0 642 aa8.94□□□□□ -0.98
PFDN4-202ENST00000441080 PTSQ03393 145 aa8.93□□□□□ -0.98
PFDN4-202ENST00000441080 C1orf53Q5VUE5 145 aa8.93□□□□□ -0.98
PFDN4-202ENST00000441080 GNEQ9Y223 722 aaKnown RBP8.93□□□□□ -0.98
PFDN4-202ENST00000441080 DYRK1BQ9Y463 629 aa8.93□□□□□ -0.98
PFDN4-202ENST00000441080 SENP3-EIF4A1A0A087X0R7 540 aa8.92□□□□□ -0.98
PFDN4-202ENST00000441080 ZBTB7CA1YPR0 619 aa8.92□□□□□ -0.98
PFDN4-202ENST00000441080 ATP4AP20648 1035 aa8.92□□□□□ -0.98
PFDN4-202ENST00000441080 MSX1P28360 303 aa8.92□□□□□ -0.98
PFDN4-202ENST00000441080 SERPINB4P48594 390 aa8.92□□□□□ -0.98
PFDN4-202ENST00000441080 RTN1Q16799 776 aa8.92□□□□□ -0.98
PFDN4-202ENST00000441080 C16orf46Q6P387 395 aa8.92□□□□□ -0.98
PFDN4-202ENST00000441080 RHPN1Q8TCX5 695 aa8.92□□□□□ -0.98
PFDN4-202ENST00000441080 GAS2L1Q99501 681 aaPredicted RBP8.92□□□□□ -0.98
PFDN4-202ENST00000441080 QTRT2Q9H974 415 aaKnown RBP8.92□□□□□ -0.98
PFDN4-202ENST00000441080 GPAMQ9HCL2 828 aa8.92□□□□□ -0.98
PFDN4-202ENST00000441080 POTECB2RU33 542 aa8.91□□□□□ -0.98
PFDN4-202ENST00000441080 ABL1P00519 1130 aa8.91□□□□□ -0.98
PFDN4-202ENST00000441080 BICDL1Q6ZP65 573 aa8.91□□□□□ -0.98
PFDN4-202ENST00000441080 GTF3C2Q8WUA4 911 aaPredicted RBP8.91□□□□□ -0.98
PFDN4-202ENST00000441080 MYO19Q96H55 970 aa8.91□□□□□ -0.98
PFDN4-202ENST00000441080 F11P03951 625 aa8.9□□□□□ -0.98
PFDN4-202ENST00000441080 ARSJQ5FYB0 599 aaPredicted RBP8.9□□□□□ -0.98
PFDN4-202ENST00000441080 COX20Q5RI15 118 aa8.9□□□□□ -0.98
PFDN4-202ENST00000441080 SAP130Q9H0E3 1048 aa8.9□□□□□ -0.98
PFDN4-202ENST00000441080 SLC35F4A4IF30 521 aa8.89□□□□□ -0.99
PFDN4-202ENST00000441080 ZNF211Q13398 564 aaPredicted RBP8.89□□□□□ -0.99
PFDN4-202ENST00000441080 HELQQ8TDG4 1101 aa8.89□□□□□ -0.99
PFDN4-202ENST00000441080 GPC6Q9Y625 555 aaPredicted RBP8.89□□□□□ -0.99
PFDN4-202ENST00000441080 DNMT3AQ9Y6K1 912 aaPredicted RBP8.89□□□□□ -0.99
PFDN4-202ENST00000441080 TRIM26Q12899 539 aaPredicted RBP8.88□□□□□ -0.99
PFDN4-202ENST00000441080 DGKZQ13574 1117 aa8.88□□□□□ -0.99
PFDN4-202ENST00000441080 RIPOR1Q6ZS17 1223 aa8.88□□□□□ -0.99
PFDN4-202ENST00000441080 PGBD3Q8N328 593 aa8.88□□□□□ -0.99
PFDN4-202ENST00000441080 CCDC155Q8N6L0 562 aa8.88□□□□□ -0.99
PFDN4-202ENST00000441080 RUBCNLQ9H714 662 aa8.88□□□□□ -0.99
PFDN4-202ENST00000441080 EGFL7Q9UHF1 273 aa8.88□□□□□ -0.99
PFDN4-202ENST00000441080 LRFN2Q9ULH4 789 aa8.88□□□□□ -0.99
PFDN4-202ENST00000441080 ZIC5Q96T25 663 aa8.87□□□□□ -0.99
PFDN4-202ENST00000441080 CRISPLD1Q9H336 500 aa8.87□□□□□ -0.99
PFDN4-202ENST00000441080 NEUROD4Q9HD90 331 aa8.87□□□□□ -0.99
PFDN4-202ENST00000441080 ANO2Q9NQ90 1003 aa8.87□□□□□ -0.99
PFDN4-202ENST00000441080 KLK14Q9P0G3 267 aa8.87□□□□□ -0.99
PFDN4-202ENST00000441080 A0A1W2PNR3 127 aa8.86□□□□□ -0.99
PFDN4-202ENST00000441080 H3BRB1 525 aa8.86□□□□□ -0.99
PFDN4-202ENST00000441080 SF3B2Q13435 895 aaKnown RBP8.86□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 63.8 ms