RNA–Protein interactions for RNA: ENST00000439936.6

COPS3-203, Transcript of COP9 signalosome subunit 3, humanhuman

TSL 5 BASIC

Gene COPS3, Length 1,394 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS3-203ENST00000439936 EVI5O60447 810 aa10.12□□□□□ -0.79
COPS3-203ENST00000439936 FOSBP53539 338 aa10.12□□□□□ -0.79
COPS3-203ENST00000439936 KRT27Q7Z3Y8 459 aa10.12□□□□□ -0.79
COPS3-203ENST00000439936 ZNF454Q8N9F8 522 aa10.12□□□□□ -0.79
COPS3-203ENST00000439936 SLC4A5Q9BY07 1137 aa10.12□□□□□ -0.79
COPS3-203ENST00000439936 RTL1A6NKG5 1358 aa10.11□□□□□ -0.79
COPS3-203ENST00000439936 KCNK17Q96T54 332 aa10.11□□□□□ -0.79
COPS3-203ENST00000439936 EXOC5O00471 708 aa10.1□□□□□ -0.79
COPS3-203ENST00000439936 EIF4A2Q14240 407 aaKnown RBP10.1□□□□□ -0.79
COPS3-203ENST00000439936 FAM182BQ5T319 152 aa10.1□□□□□ -0.79
COPS3-203ENST00000439936 USHBP1Q8N6Y0 703 aa10.1□□□□□ -0.79
COPS3-203ENST00000439936 EYA1Q99502 592 aa10.1□□□□□ -0.79
COPS3-203ENST00000439936 VPS9D1Q9Y2B5 631 aa10.1□□□□□ -0.79
COPS3-203ENST00000439936 IL2RBP14784 551 aa10.09□□□□□ -0.79
COPS3-203ENST00000439936 PDE3BQ13370 1112 aa10.09□□□□□ -0.79
COPS3-203ENST00000439936 DDB1Q16531 1140 aa10.09□□□□□ -0.79
COPS3-203ENST00000439936 CDCA7Q9BWT1 371 aaPredicted RBP10.09□□□□□ -0.79
COPS3-203ENST00000439936 PPP2R1AP30153 589 aa10.08□□□□□ -0.8
COPS3-203ENST00000439936 ARHGEF1Q92888 912 aaKnown RBP10.08□□□□□ -0.8
COPS3-203ENST00000439936 THSD7AQ9UPZ6 1657 aa10.08□□□□□ -0.8
COPS3-203ENST00000439936 IL13P35225 146 aa10.07□□□□□ -0.8
COPS3-203ENST00000439936 KAT6BQ8WYB5 2073 aa10.07□□□□□ -0.8
COPS3-203ENST00000439936 FAM208AQ9UK61 1670 aaKnown RBP10.07□□□□□ -0.8
COPS3-203ENST00000439936 DISP2A7MBM2 1401 aa10.06□□□□□ -0.8
COPS3-203ENST00000439936 SMG6Q86US8 1419 aaKnown RBP10.06□□□□□ -0.8
COPS3-203ENST00000439936 MAP3K9P80192 1104 aa10.06□□□□□ -0.8
COPS3-203ENST00000439936 MARCH10Q8NA82 808 aaPredicted RBP10.06□□□□□ -0.8
COPS3-203ENST00000439936 BCL2L12Q9HB09 334 aa10.06□□□□□ -0.8
COPS3-203ENST00000439936 ARIH1Q9Y4X5 557 aaPredicted RBP10.06□□□□□ -0.8
COPS3-203ENST00000439936 PARP4Q9UKK3 1724 aaKnown RBP10.05□□□□□ -0.8
COPS3-203ENST00000439936 DIAPH1O60610 1272 aaKnown RBP10.05□□□□□ -0.8
COPS3-203ENST00000439936 TATP17735 454 aaPredicted RBP10.05□□□□□ -0.8
COPS3-203ENST00000439936 PTPN5P54829 565 aa10.05□□□□□ -0.8
COPS3-203ENST00000439936 FAM196AQ6ZSG2 479 aa10.05□□□□□ -0.8
COPS3-203ENST00000439936 ZCRB1Q8TBF4 217 aaKnown RBP10.05□□□□□ -0.8
COPS3-203ENST00000439936 RAPGEF4Q8WZA2 1011 aa10.05□□□□□ -0.8
COPS3-203ENST00000439936 ADAM33Q9BZ11 813 aa10.05□□□□□ -0.8
COPS3-203ENST00000439936 WNK3Q9BYP7 1800 aa10.05□□□□□ -0.8
COPS3-203ENST00000439936 PARD3Q8TEW0 1356 aa10.04□□□□□ -0.8
COPS3-203ENST00000439936 RALBP1Q15311 655 aa10.04□□□□□ -0.8
COPS3-203ENST00000439936 DDX54Q8TDD1 881 aaKnown RBP10.04□□□□□ -0.8
COPS3-203ENST00000439936 IGSF1Q8N6C5 1336 aa10.04□□□□□ -0.8
COPS3-203ENST00000439936 ERICH6Q7L0X2 663 aa10.03□□□□□ -0.8
COPS3-203ENST00000439936 CCDC125Q86Z20 511 aa10.03□□□□□ -0.8
COPS3-203ENST00000439936 CFAP53Q96M91 514 aa10.03□□□□□ -0.8
COPS3-203ENST00000439936 GOLGA8CPA6NN73 597 aa10.02□□□□□ -0.8
COPS3-203ENST00000439936 TRIM37O94972 964 aa10.02□□□□□ -0.8
COPS3-203ENST00000439936 PTPREP23469 700 aa10.02□□□□□ -0.8
COPS3-203ENST00000439936 SULT6B1Q6IMI4 303 aa10.02□□□□□ -0.8
COPS3-203ENST00000439936 AEBP1Q8IUX7 1158 aa10.02□□□□□ -0.8
COPS3-203ENST00000439936 PRKRIP1Q9H875 184 aaPredicted RBP10.02□□□□□ -0.8
COPS3-203ENST00000439936 NCAPD2Q15021 1401 aa10.02□□□□□ -0.81
COPS3-203ENST00000439936 MEGF6O75095 1541 aa10.02□□□□□ -0.81
COPS3-203ENST00000439936 BHMG1C9JSJ3 638 aaPredicted RBP10.01□□□□□ -0.81
COPS3-203ENST00000439936 U2SURPO15042 1029 aaKnown RBP10.01□□□□□ -0.81
COPS3-203ENST00000439936 THSD4Q6ZMP0 1018 aa10.01□□□□□ -0.81
COPS3-203ENST00000439936 IRX2Q9BZI1 471 aaPredicted RBP10.01□□□□□ -0.81
COPS3-203ENST00000439936 PCDHGA10Q9Y5H3 936 aa10.01□□□□□ -0.81
COPS3-203ENST00000439936 LRRC37A3O60309 1634 aa10.01□□□□□ -0.81
COPS3-203ENST00000439936 SBF2Q86WG5 1849 aa10.01□□□□□ -0.81
COPS3-203ENST00000439936 OVOS2A0A0G2JMS6 1433 aa10.01□□□□□ -0.81
COPS3-203ENST00000439936 DPYSL4O14531 572 aa10.01□□□□□ -0.81
COPS3-203ENST00000439936 HMOX1P09601 288 aa10.01□□□□□ -0.81
COPS3-203ENST00000439936 NBR1Q14596 966 aa10.01□□□□□ -0.81
COPS3-203ENST00000439936 PTF1AQ7RTS3 328 aa10.01□□□□□ -0.81
COPS3-203ENST00000439936 ZDHHC16Q969W1 377 aa10.01□□□□□ -0.81
COPS3-203ENST00000439936 SPG7Q9UQ90 795 aa10.01□□□□□ -0.81
COPS3-203ENST00000439936 NUDCQ9Y266 331 aa10.01□□□□□ -0.81
COPS3-203ENST00000439936 TNS2Q63HR2 1409 aa10□□□□□ -0.81
COPS3-203ENST00000439936 CYP27B1O15528 508 aa10□□□□□ -0.81
COPS3-203ENST00000439936 KCNQ2O43526 872 aa10□□□□□ -0.81
COPS3-203ENST00000439936 PLEKHO1Q53GL0 409 aaPredicted RBP10□□□□□ -0.81
COPS3-203ENST00000439936 MRPL50Q8N5N7 158 aaKnown RBP10□□□□□ -0.81
COPS3-203ENST00000439936 COL3A1P02461 1466 aaPredicted RBP10□□□□□ -0.81
COPS3-203ENST00000439936 MYBBP1AQ9BQG0 1328 aaKnown RBP9.99□□□□□ -0.81
COPS3-203ENST00000439936 EP400Q96L91 3159 aa9.99□□□□□ -0.81
COPS3-203ENST00000439936 SF3B2Q13435 895 aaKnown RBP9.99□□□□□ -0.81
COPS3-203ENST00000439936 DEFB132Q7Z7B7 95 aa9.99□□□□□ -0.81
COPS3-203ENST00000439936 ACSBG1Q96GR2 724 aa9.99□□□□□ -0.81
COPS3-203ENST00000439936 ZBED2Q9BTP6 218 aa9.99□□□□□ -0.81
COPS3-203ENST00000439936 NBPF3Q9H094 633 aa9.99□□□□□ -0.81
COPS3-203ENST00000439936 RGPD1P0DJD0 1748 aa9.99□□□□□ -0.81
COPS3-203ENST00000439936 SHANK3Q9BYB0 1731 aa9.98□□□□□ -0.81
COPS3-203ENST00000439936 APBA3O96018 575 aa9.98□□□□□ -0.81
COPS3-203ENST00000439936 U2AF1L5P0DN76 240 aaPredicted RBP9.98□□□□□ -0.81
COPS3-203ENST00000439936 U2AF1Q01081 240 aaKnown RBP eCLIP9.98□□□□□ -0.81
COPS3-203ENST00000439936 AMOTQ4VCS5 1084 aa9.98□□□□□ -0.81
COPS3-203ENST00000439936 IFNL2Q8IZJ0 200 aa9.98□□□□□ -0.81
COPS3-203ENST00000439936 WNT2BQ93097 391 aa9.98□□□□□ -0.81
COPS3-203ENST00000439936 KDRP35968 1356 aa9.97□□□□□ -0.81
COPS3-203ENST00000439936 BCL9O00512 1426 aa9.97□□□□□ -0.81
COPS3-203ENST00000439936 FCHSD2O94868 740 aa9.97□□□□□ -0.81
COPS3-203ENST00000439936 PHKG2P15735 406 aa9.97□□□□□ -0.81
COPS3-203ENST00000439936 PRIM1P49642 420 aaKnown RBP9.97□□□□□ -0.81
COPS3-203ENST00000439936 EN1Q05925 392 aaPredicted RBP9.97□□□□□ -0.81
COPS3-203ENST00000439936 PCDH11XQ9BZA7 1347 aa9.97□□□□□ -0.81
COPS3-203ENST00000439936 PCDH11YQ9BZA8 1340 aa9.97□□□□□ -0.81
COPS3-203ENST00000439936 ANP32CO43423 234 aa9.96□□□□□ -0.82
COPS3-203ENST00000439936 COL9A1P20849 921 aa9.96□□□□□ -0.82
COPS3-203ENST00000439936 BAG6P46379 1132 aa9.96□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 42.9 ms