RNA–Protein interactions for RNA: ENST00000438594.2

HMGB1P12-201, Transcript of high mobility group box 1 pseudogene 12, humanhuman

BASIC

Gene HMGB1P12, Length 598 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P12-201ENST00000438594 PCDHGC4Q9Y5F7 938 aa6.12□□□□□ -1.43
HMGB1P12-201ENST00000438594 SCO2A0A1W2PP80 73 aa6.11□□□□□ -1.43
HMGB1P12-201ENST00000438594 KHNYNO15037 678 aaKnown RBP6.11□□□□□ -1.43
HMGB1P12-201ENST00000438594 ATXN7O15265 892 aaPredicted RBP6.11□□□□□ -1.43
HMGB1P12-201ENST00000438594 UBTFP17480 764 aaKnown RBP6.11□□□□□ -1.43
HMGB1P12-201ENST00000438594 CD33P20138 364 aa6.11□□□□□ -1.43
HMGB1P12-201ENST00000438594 ADH6P28332 368 aa6.11□□□□□ -1.43
HMGB1P12-201ENST00000438594 USP4Q13107 963 aa6.11□□□□□ -1.43
HMGB1P12-201ENST00000438594 ARSJQ5FYB0 599 aaPredicted RBP6.11□□□□□ -1.43
HMGB1P12-201ENST00000438594 PPARGC1BQ86YN6 1023 aaKnown RBP6.11□□□□□ -1.43
HMGB1P12-201ENST00000438594 CRISPLD1Q9H336 500 aa6.11□□□□□ -1.43
HMGB1P12-201ENST00000438594 ETNK1Q9HBU6 452 aa6.11□□□□□ -1.43
HMGB1P12-201ENST00000438594 GJA3Q9Y6H8 435 aa6.11□□□□□ -1.43
HMGB1P12-201ENST00000438594 GATA4P43694 442 aa6.1□□□□□ -1.43
HMGB1P12-201ENST00000438594 NEUROD2Q15784 382 aa6.1□□□□□ -1.43
HMGB1P12-201ENST00000438594 TSGA10IPQ3SY00 556 aa6.1□□□□□ -1.43
HMGB1P12-201ENST00000438594 SLFNL1Q499Z3 407 aa6.1□□□□□ -1.43
HMGB1P12-201ENST00000438594 PRR12Q9ULL5 1215 aa6.1□□□□□ -1.43
HMGB1P12-201ENST00000438594 APBB1O00213 710 aa6.09□□□□□ -1.43
HMGB1P12-201ENST00000438594 PCBP4P57723 403 aaKnown RBP6.09□□□□□ -1.43
HMGB1P12-201ENST00000438594 MTMR14Q8NCE2 650 aa6.09□□□□□ -1.43
HMGB1P12-201ENST00000438594 PLVAPQ9BX97 442 aa6.09□□□□□ -1.43
HMGB1P12-201ENST00000438594 A0A1W2PNR3 127 aa6.08□□□□□ -1.44
HMGB1P12-201ENST00000438594 MAPTP10636 758 aaKnown RBP6.08□□□□□ -1.44
HMGB1P12-201ENST00000438594 GDF10P55107 478 aa6.08□□□□□ -1.44
HMGB1P12-201ENST00000438594 NLRP8Q86W28 1048 aa6.08□□□□□ -1.44
HMGB1P12-201ENST00000438594 SIRT1Q96EB6 747 aa6.08□□□□□ -1.44
HMGB1P12-201ENST00000438594 NIFKQ9BYG3 293 aaKnown RBP6.08□□□□□ -1.44
HMGB1P12-201ENST00000438594 SNRKQ9NRH2 765 aa6.08□□□□□ -1.44
HMGB1P12-201ENST00000438594 DNAAF2Q9NVR5 837 aaKnown RBP6.08□□□□□ -1.44
HMGB1P12-201ENST00000438594 SERTAD1Q9UHV2 236 aa6.08□□□□□ -1.44
HMGB1P12-201ENST00000438594 GPR37L1O60883 481 aa6.07□□□□□ -1.44
HMGB1P12-201ENST00000438594 ATP4AP20648 1035 aa6.07□□□□□ -1.44
HMGB1P12-201ENST00000438594 EIF4G2P78344 907 aaKnown RBP eCLIP6.07□□□□□ -1.44
HMGB1P12-201ENST00000438594 NBPF1Q3BBV0 1214 aa6.07□□□□□ -1.44
HMGB1P12-201ENST00000438594 FCHSD1Q86WN1 690 aa6.07□□□□□ -1.44
HMGB1P12-201ENST00000438594 BANK1Q8NDB2 785 aa6.07□□□□□ -1.44
HMGB1P12-201ENST00000438594 C1orf216Q8TAB5 229 aa6.07□□□□□ -1.44
HMGB1P12-201ENST00000438594 SPATA31C1P0DKV0 1188 aa6.06□□□□□ -1.44
HMGB1P12-201ENST00000438594 TATP17735 454 aaPredicted RBP6.06□□□□□ -1.44
HMGB1P12-201ENST00000438594 ITGB7P26010 798 aa6.06□□□□□ -1.44
HMGB1P12-201ENST00000438594 TNP2Q05952 138 aa6.06□□□□□ -1.44
HMGB1P12-201ENST00000438594 BICDL1Q6ZP65 573 aa6.06□□□□□ -1.44
HMGB1P12-201ENST00000438594 TRIM11Q96F44 468 aa6.06□□□□□ -1.44
HMGB1P12-201ENST00000438594 KLF15Q9UIH9 416 aa6.06□□□□□ -1.44
HMGB1P12-201ENST00000438594 APBA3O96018 575 aa6.05□□□□□ -1.44
HMGB1P12-201ENST00000438594 INHAP05111 366 aa6.05□□□□□ -1.44
HMGB1P12-201ENST00000438594 PRRT3Q5FWE3 981 aa6.05□□□□□ -1.44
HMGB1P12-201ENST00000438594 CABP1Q9NZU7 370 aa6.05□□□□□ -1.44
HMGB1P12-201ENST00000438594 SPDYE3A6NKU9 549 aa6.04□□□□□ -1.44
HMGB1P12-201ENST00000438594 ALAS2P22557 587 aa6.04□□□□□ -1.44
HMGB1P12-201ENST00000438594 SMTNP53814 917 aa6.04□□□□□ -1.44
HMGB1P12-201ENST00000438594 FAM182BQ5T319 152 aa6.04□□□□□ -1.44
HMGB1P12-201ENST00000438594 TBC1D2BQ9UPU7 963 aa6.04□□□□□ -1.44
HMGB1P12-201ENST00000438594 SCNN1DP51172 638 aa6.03□□□□□ -1.44
HMGB1P12-201ENST00000438594 ZNF468Q5VIY5 522 aaPredicted RBP6.03□□□□□ -1.44
HMGB1P12-201ENST00000438594 PRM3Q9NNZ6 103 aa6.03□□□□□ -1.44
HMGB1P12-201ENST00000438594 AVENQ9NQS1 362 aaPredicted RBP6.03□□□□□ -1.44
HMGB1P12-201ENST00000438594 MARK1Q9P0L2 795 aa6.03□□□□□ -1.44
HMGB1P12-201ENST00000438594 PARP3Q9Y6F1 533 aa6.03□□□□□ -1.44
HMGB1P12-201ENST00000438594 FAM229AH3BQW9 127 aa6.02□□□□□ -1.45
HMGB1P12-201ENST00000438594 RSPO4Q2I0M5 234 aaPredicted RBP6.02□□□□□ -1.45
HMGB1P12-201ENST00000438594 PHTF2Q8N3S3 785 aa6.02□□□□□ -1.45
HMGB1P12-201ENST00000438594 ZIC5Q96T25 663 aa6.02□□□□□ -1.45
HMGB1P12-201ENST00000438594 KRTAP9-2Q9BYQ4 174 aa6.02□□□□□ -1.45
HMGB1P12-201ENST00000438594 HCN2Q9UL51 889 aa6.02□□□□□ -1.45
HMGB1P12-201ENST00000438594 KRTAP9-1A8MXZ3 250 aaPredicted RBP6.01□□□□□ -1.45
HMGB1P12-201ENST00000438594 SOCS7O14512 581 aa6.01□□□□□ -1.45
HMGB1P12-201ENST00000438594 VAC14Q08AM6 782 aa6.01□□□□□ -1.45
HMGB1P12-201ENST00000438594 SYT9Q86SS6 491 aa6.01□□□□□ -1.45
HMGB1P12-201ENST00000438594 NEUROD4Q9HD90 331 aa6.01□□□□□ -1.45
HMGB1P12-201ENST00000438594 STRN4Q9NRL3 753 aa6.01□□□□□ -1.45
HMGB1P12-201ENST00000438594 TPSG1Q9NRR2 321 aa6.01□□□□□ -1.45
HMGB1P12-201ENST00000438594 ELOA3CA0A087WX78 387 aaPredicted RBP6□□□□□ -1.45
HMGB1P12-201ENST00000438594 KRTAP9-6A0A140TA67 174 aa6□□□□□ -1.45
HMGB1P12-201ENST00000438594 ELOA3DA6NLF2 546 aaPredicted RBP6□□□□□ -1.45
HMGB1P12-201ENST00000438594 EIF5BO60841 1220 aaKnown RBP6□□□□□ -1.45
HMGB1P12-201ENST00000438594 FAM157BP0CG42 384 aa6□□□□□ -1.45
HMGB1P12-201ENST00000438594 ELOA3BQ3SY89 546 aa6□□□□□ -1.45
HMGB1P12-201ENST00000438594 NBPF11Q86T75 865 aa6□□□□□ -1.45
HMGB1P12-201ENST00000438594 ELOA3Q8NG57 546 aa6□□□□□ -1.45
HMGB1P12-201ENST00000438594 ZDHHC3Q9NYG2 299 aa6□□□□□ -1.45
HMGB1P12-201ENST00000438594 USP3Q9Y6I4 520 aa6□□□□□ -1.45
HMGB1P12-201ENST00000438594 A6NJY4 79 aa5.99□□□□□ -1.45
HMGB1P12-201ENST00000438594 M0R082 166 aa5.99□□□□□ -1.45
HMGB1P12-201ENST00000438594 TRIM28Q13263 835 aaKnown RBP5.99□□□□□ -1.45
HMGB1P12-201ENST00000438594 LRRC69Q6ZNQ3 347 aa5.99□□□□□ -1.45
HMGB1P12-201ENST00000438594 PLPP7Q8NBV4 271 aa5.99□□□□□ -1.45
HMGB1P12-201ENST00000438594 ZNF417Q8TAU3 575 aa5.99□□□□□ -1.45
HMGB1P12-201ENST00000438594 ZNF587Q96SQ5 575 aaPredicted RBP5.99□□□□□ -1.45
HMGB1P12-201ENST00000438594 ZFP64Q9NPA5 681 aa5.99□□□□□ -1.45
HMGB1P12-201ENST00000438594 CDK2AP1O14519 115 aa5.98□□□□□ -1.45
HMGB1P12-201ENST00000438594 DYRK3O43781 588 aa5.98□□□□□ -1.45
HMGB1P12-201ENST00000438594 TXLNAP40222 546 aa5.98□□□□□ -1.45
HMGB1P12-201ENST00000438594 MAP7D1Q3KQU3 841 aa5.98□□□□□ -1.45
HMGB1P12-201ENST00000438594 FOXD4L6Q3SYB3 417 aaPredicted RBP5.98□□□□□ -1.45
HMGB1P12-201ENST00000438594 NKAPLQ5M9Q1 402 aa5.98□□□□□ -1.45
HMGB1P12-201ENST00000438594 FOXD4L3Q6VB84 417 aaPredicted RBP5.98□□□□□ -1.45
HMGB1P12-201ENST00000438594 NACC1Q96RE7 527 aa5.98□□□□□ -1.45
HMGB1P12-201ENST00000438594 TMEM229AB2RXF0 380 aa5.97□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 12.8 ms