RNA–Protein interactions for RNA: ENST00000438265.5

RPE-211, Transcript of ribulose-5-phosphate-3-epimerase, humanhuman

TSL 3

Gene RPE, Length 668 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPE-211ENST00000438265 SOS1Q07889 1333 aaPredicted RBP11.14□□□□□ -0.63
RPE-211ENST00000438265 ARFGEF2Q9Y6D5 1785 aa11.14□□□□□ -0.63
RPE-211ENST00000438265 POLRMTO00411 1230 aaKnown RBP11.14□□□□□ -0.63
RPE-211ENST00000438265 CYP19A1P11511 503 aaPredicted RBP11.14□□□□□ -0.63
RPE-211ENST00000438265 CHRNA5P30532 468 aa11.14□□□□□ -0.63
RPE-211ENST00000438265 RFC4P35249 363 aa11.14□□□□□ -0.63
RPE-211ENST00000438265 AKAP4Q5JQC9 854 aa11.14□□□□□ -0.63
RPE-211ENST00000438265 C1orf141Q5JVX7 400 aa11.14□□□□□ -0.63
RPE-211ENST00000438265 SLC52A2Q9HAB3 445 aa11.14□□□□□ -0.63
RPE-211ENST00000438265 GPBP1L1Q9HC44 474 aaPredicted RBP11.14□□□□□ -0.63
RPE-211ENST00000438265 ZBTB1Q9Y2K1 713 aa11.14□□□□□ -0.63
RPE-211ENST00000438265 TNRC6CQ9HCJ0 1690 aaKnown RBP11.14□□□□□ -0.63
RPE-211ENST00000438265 ZNF316A6NFI3 1004 aaPredicted RBP11.13□□□□□ -0.63
RPE-211ENST00000438265 ADRA2BP18089 450 aa11.13□□□□□ -0.63
RPE-211ENST00000438265 TM4SF1P30408 202 aa11.13□□□□□ -0.63
RPE-211ENST00000438265 NLGN1Q8N2Q7 840 aa11.13□□□□□ -0.63
RPE-211ENST00000438265 KCNQ3O43525 872 aa11.12□□□□□ -0.63
RPE-211ENST00000438265 TGFB2P61812 414 aa11.12□□□□□ -0.63
RPE-211ENST00000438265 USPL1Q5W0Q7 1092 aa11.12□□□□□ -0.63
RPE-211ENST00000438265 NMRK2Q9NPI5 230 aa11.12□□□□□ -0.63
RPE-211ENST00000438265 CCDC87Q9NVE4 849 aa11.12□□□□□ -0.63
RPE-211ENST00000438265 COL15A1P39059 1388 aa11.12□□□□□ -0.63
RPE-211ENST00000438265 FCHSD2O94868 740 aa11.11□□□□□ -0.63
RPE-211ENST00000438265 RALBP1Q15311 655 aa11.11□□□□□ -0.63
RPE-211ENST00000438265 IL17REQ8NFR9 667 aa11.11□□□□□ -0.63
RPE-211ENST00000438265 PARP3Q9Y6F1 533 aa11.11□□□□□ -0.63
RPE-211ENST00000438265 NUP98P52948 1817 aa11.11□□□□□ -0.63
RPE-211ENST00000438265 LAMB4A4D0S4 1761 aa11.11□□□□□ -0.63
RPE-211ENST00000438265 KDM3BQ7LBC6 1761 aa11.11□□□□□ -0.63
RPE-211ENST00000438265 NFIXQ14938 502 aa11.1□□□□□ -0.63
RPE-211ENST00000438265 ARHGAP27Q6ZUM4 889 aa11.1□□□□□ -0.63
RPE-211ENST00000438265 PHACTR3Q96KR7 559 aa11.1□□□□□ -0.63
RPE-211ENST00000438265 PRAMEF22A3QJZ6 481 aa11.09□□□□□ -0.63
RPE-211ENST00000438265 DIAPH1O60610 1272 aaKnown RBP11.09□□□□□ -0.63
RPE-211ENST00000438265 HSPA6P17066 643 aa11.09□□□□□ -0.63
RPE-211ENST00000438265 RASSF7Q02833 373 aa11.09□□□□□ -0.63
RPE-211ENST00000438265 DDX10Q13206 875 aaKnown RBP11.09□□□□□ -0.63
RPE-211ENST00000438265 CCDC24Q8N4L8 307 aa11.09□□□□□ -0.63
RPE-211ENST00000438265 CFAP53Q96M91 514 aa11.09□□□□□ -0.63
RPE-211ENST00000438265 PIP4K2AP48426 406 aaPredicted RBP11.08□□□□□ -0.64
RPE-211ENST00000438265 HTRA3P83110 453 aa11.08□□□□□ -0.64
RPE-211ENST00000438265 C9orf131Q5VYM1 1079 aa11.08□□□□□ -0.64
RPE-211ENST00000438265 ZNF496Q96IT1 587 aaPredicted RBP11.08□□□□□ -0.64
RPE-211ENST00000438265 HMGB2P26583 209 aaKnown RBP11.07□□□□□ -0.64
RPE-211ENST00000438265 CANXP27824 592 aaKnown RBP11.07□□□□□ -0.64
RPE-211ENST00000438265 PPP2R1AP30153 589 aa11.07□□□□□ -0.64
RPE-211ENST00000438265 NARFQ9UHQ1 456 aa11.07□□□□□ -0.64
RPE-211ENST00000438265 CEMIPQ8WUJ3 1361 aa11.06□□□□□ -0.64
RPE-211ENST00000438265 HEG1Q9ULI3 1381 aa11.06□□□□□ -0.64
RPE-211ENST00000438265 EIF5P55010 431 aaKnown RBP11.06□□□□□ -0.64
RPE-211ENST00000438265 TBC1D9BQ66K14 1250 aa11.06□□□□□ -0.64
RPE-211ENST00000438265 RSPH6AQ9H0K4 717 aa11.06□□□□□ -0.64
RPE-211ENST00000438265 MYBBP1AQ9BQG0 1328 aaKnown RBP11.06□□□□□ -0.64
RPE-211ENST00000438265 U2SURPO15042 1029 aaKnown RBP11.05□□□□□ -0.64
RPE-211ENST00000438265 A1BGP04217 495 aa11.05□□□□□ -0.64
RPE-211ENST00000438265 TAF1P21675 1872 aa11.05□□□□□ -0.64
RPE-211ENST00000438265 BICDL1Q6ZP65 573 aa11.05□□□□□ -0.64
RPE-211ENST00000438265 DNAJC5GQ8N7S2 189 aa11.05□□□□□ -0.64
RPE-211ENST00000438265 PIM2Q9P1W9 311 aa11.05□□□□□ -0.64
RPE-211ENST00000438265 NUDCQ9Y266 331 aa11.05□□□□□ -0.64
RPE-211ENST00000438265 LAMB2P55268 1798 aa11.04□□□□□ -0.64
RPE-211ENST00000438265 SERPINB2P05120 415 aa11.04□□□□□ -0.64
RPE-211ENST00000438265 DCTN1Q14203 1278 aa11.04□□□□□ -0.64
RPE-211ENST00000438265 DALRD3Q5D0E6 543 aaKnown RBP11.04□□□□□ -0.64
RPE-211ENST00000438265 ZNF790Q6PG37 636 aa11.04□□□□□ -0.64
RPE-211ENST00000438265 RNF181Q9P0P0 153 aa11.04□□□□□ -0.64
RPE-211ENST00000438265 TBC1D2BQ9UPU7 963 aa11.04□□□□□ -0.64
RPE-211ENST00000438265 NFKBIEO00221 500 aa11.03□□□□□ -0.64
RPE-211ENST00000438265 ZPR1O75312 459 aa11.03□□□□□ -0.64
RPE-211ENST00000438265 PRKAR2BP31323 418 aa11.03□□□□□ -0.64
RPE-211ENST00000438265 PRKRIP1Q9H875 184 aaPredicted RBP11.03□□□□□ -0.64
RPE-211ENST00000438265 USP16Q9Y5T5 823 aa11.03□□□□□ -0.64
RPE-211ENST00000438265 GNAT3A8MTJ3 354 aa11.02□□□□□ -0.65
RPE-211ENST00000438265 MCM10Q7L590 875 aa11.02□□□□□ -0.65
RPE-211ENST00000438265 SLC51AQ86UW1 340 aa11.02□□□□□ -0.65
RPE-211ENST00000438265 VSIG10Q8N0Z9 540 aa11.02□□□□□ -0.65
RPE-211ENST00000438265 RRAGCQ9HB90 399 aa11.02□□□□□ -0.65
RPE-211ENST00000438265 POTECB2RU33 542 aa11.01□□□□□ -0.65
RPE-211ENST00000438265 TOMM70O94826 608 aa11.01□□□□□ -0.65
RPE-211ENST00000438265 CAMTA2O94983 1202 aa11.01□□□□□ -0.65
RPE-211ENST00000438265 PRR5LQ6MZQ0 368 aa11□□□□□ -0.65
RPE-211ENST00000438265 C2CD5Q86YS7 1000 aa11□□□□□ -0.65
RPE-211ENST00000438265 ZNF219Q9P2Y4 722 aaPredicted RBP11□□□□□ -0.65
RPE-211ENST00000438265 ZNF330Q9Y3S2 320 aaPredicted RBP11□□□□□ -0.65
RPE-211ENST00000438265 COL4A5P29400 1685 aa10.99□□□□□ -0.65
RPE-211ENST00000438265 ANKRD36CQ5JPF3 1778 aa10.99□□□□□ -0.65
RPE-211ENST00000438265 NBPF26B4DH59 902 aa10.99□□□□□ -0.65
RPE-211ENST00000438265 NBPF10Q6P3W6 841 aaKnown RBP10.99□□□□□ -0.65
RPE-211ENST00000438265 NBPF15Q8N660 670 aa10.99□□□□□ -0.65
RPE-211ENST00000438265 GAS2L2Q8NHY3 880 aa10.99□□□□□ -0.65
RPE-211ENST00000438265 MIS18AQ9NYP9 233 aa10.99□□□□□ -0.65
RPE-211ENST00000438265 TEFQ10587 303 aa10.98□□□□□ -0.65
RPE-211ENST00000438265 IFFO2Q5TF58 517 aa10.98□□□□□ -0.65
RPE-211ENST00000438265 OLFM4Q6UX06 510 aa10.98□□□□□ -0.65
RPE-211ENST00000438265 TTC5Q8N0Z6 440 aa10.98□□□□□ -0.65
RPE-211ENST00000438265 PNNQ9H307 717 aaKnown RBP10.98□□□□□ -0.65
RPE-211ENST00000438265 LTBP1Q14766 1721 aa10.98□□□□□ -0.65
RPE-211ENST00000438265 BTBD11A6QL63 1104 aa10.97□□□□□ -0.65
RPE-211ENST00000438265 IL6STP40189 918 aaPredicted RBP10.97□□□□□ -0.65
RPE-211ENST00000438265 TTLL6Q8N841 843 aa10.97□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms