RNA–Protein interactions for RNA: ENST00000438204.6

RPE-210, Transcript of ribulose-5-phosphate-3-epimerase, humanhuman

TSL 2 BASIC

Gene RPE, Length 796 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPE-210ENST00000438204 DDNO94850 711 aaPredicted RBP13□□□□□ -0.33
RPE-210ENST00000438204 RC3H1Q5TC82 1133 aaKnown RBP13□□□□□ -0.33
RPE-210ENST00000438204 DPY19L2Q6NUT2 758 aa13□□□□□ -0.33
RPE-210ENST00000438204 TSKSQ9UJT2 592 aa13□□□□□ -0.33
RPE-210ENST00000438204 CARMIL3Q8ND23 1372 aa12.99□□□□□ -0.33
RPE-210ENST00000438204 FLT4P35916 1363 aa12.98□□□□□ -0.33
RPE-210ENST00000438204 WDR33Q9C0J8 1336 aaKnown RBP12.98□□□□□ -0.33
RPE-210ENST00000438204 RASSF10A6NK89 507 aa12.98□□□□□ -0.33
RPE-210ENST00000438204 ERFEQ4G0M1 354 aa12.98□□□□□ -0.33
RPE-210ENST00000438204 L3MBTL2Q969R5 705 aa12.98□□□□□ -0.33
RPE-210ENST00000438204 ANKRD26Q9UPS8 1709 aa12.97□□□□□ -0.33
RPE-210ENST00000438204 MAP2K1Q02750 393 aaPredicted RBP12.97□□□□□ -0.33
RPE-210ENST00000438204 LDHDQ86WU2 507 aa12.97□□□□□ -0.33
RPE-210ENST00000438204 MCOLN1Q9GZU1 580 aa12.97□□□□□ -0.33
RPE-210ENST00000438204 ZNF219Q9P2Y4 722 aaPredicted RBP12.97□□□□□ -0.33
RPE-210ENST00000438204 SPG7Q9UQ90 795 aa12.97□□□□□ -0.33
RPE-210ENST00000438204 ITGBL1O95965 494 aaPredicted RBP12.96□□□□□ -0.33
RPE-210ENST00000438204 PHKG2P15735 406 aa12.96□□□□□ -0.33
RPE-210ENST00000438204 TTLL6Q8N841 843 aa12.96□□□□□ -0.33
RPE-210ENST00000438204 GGNBP2Q9H3C7 697 aa12.96□□□□□ -0.33
RPE-210ENST00000438204 TM4SF1P30408 202 aa12.95□□□□□ -0.34
RPE-210ENST00000438204 CRKLP46109 303 aaKnown RBP12.95□□□□□ -0.34
RPE-210ENST00000438204 DEFB115Q30KQ5 88 aa12.95□□□□□ -0.34
RPE-210ENST00000438204 EAPPQ56P03 285 aaPredicted RBP12.95□□□□□ -0.34
RPE-210ENST00000438204 C2CD5Q86YS7 1000 aa12.95□□□□□ -0.34
RPE-210ENST00000438204 GRM1Q13255 1194 aa12.94□□□□□ -0.34
RPE-210ENST00000438204 TAF1DQ9H5J8 278 aaPredicted RBP12.94□□□□□ -0.34
RPE-210ENST00000438204 ABT1Q9ULW3 272 aaKnown RBP12.94□□□□□ -0.34
RPE-210ENST00000438204 SLX4Q8IY92 1834 aa12.94□□□□□ -0.34
RPE-210ENST00000438204 USPL1Q5W0Q7 1092 aa12.93□□□□□ -0.34
RPE-210ENST00000438204 IFNL2Q8IZJ0 200 aa12.93□□□□□ -0.34
RPE-210ENST00000438204 ARFGEF2Q9Y6D5 1785 aa12.93□□□□□ -0.34
RPE-210ENST00000438204 TRPM7Q96QT4 1865 aa12.93□□□□□ -0.34
RPE-210ENST00000438204 C21orf2O43822 256 aa12.92□□□□□ -0.34
RPE-210ENST00000438204 NFIXQ14938 502 aa12.92□□□□□ -0.34
RPE-210ENST00000438204 PAXIP1Q6ZW49 1069 aaPredicted RBP12.92□□□□□ -0.34
RPE-210ENST00000438204 EMILIN1Q9Y6C2 1016 aa12.92□□□□□ -0.34
RPE-210ENST00000438204 IQCA1LA6NCM1 817 aa12.91□□□□□ -0.34
RPE-210ENST00000438204 PTCD1O75127 700 aaKnown RBP12.91□□□□□ -0.34
RPE-210ENST00000438204 SOX10P56693 466 aa12.91□□□□□ -0.34
RPE-210ENST00000438204 MAP1SQ66K74 1059 aaPredicted RBP12.91□□□□□ -0.34
RPE-210ENST00000438204 CAPNS2Q96L46 248 aa12.91□□□□□ -0.34
RPE-210ENST00000438204 CLEC11AQ9Y240 323 aa12.91□□□□□ -0.34
RPE-210ENST00000438204 TONSLQ96HA7 1378 aa12.91□□□□□ -0.34
RPE-210ENST00000438204 FYB1O15117 783 aa12.9□□□□□ -0.34
RPE-210ENST00000438204 FMR1Q06787 632 aaKnown RBP eCLIP12.9□□□□□ -0.34
RPE-210ENST00000438204 PRPF38BQ5VTL8 546 aaKnown RBP12.9□□□□□ -0.34
RPE-210ENST00000438204 CYP4F22Q6NT55 531 aa12.9□□□□□ -0.34
RPE-210ENST00000438204 L3MBTL3Q96JM7 780 aaPredicted RBP12.9□□□□□ -0.34
RPE-210ENST00000438204 BEGAINQ9BUH8 593 aa12.9□□□□□ -0.34
RPE-210ENST00000438204 TAOK3Q9H2K8 898 aa12.9□□□□□ -0.34
RPE-210ENST00000438204 ZNF541Q9H0D2 1346 aa12.89□□□□□ -0.35
RPE-210ENST00000438204 H0YIN7 160 aa12.89□□□□□ -0.35
RPE-210ENST00000438204 SERPINB2P05120 415 aa12.89□□□□□ -0.35
RPE-210ENST00000438204 DGKZQ13574 1117 aa12.89□□□□□ -0.35
RPE-210ENST00000438204 KIF24Q5T7B8 1368 aa12.89□□□□□ -0.35
RPE-210ENST00000438204 AOC2O75106 756 aa12.88□□□□□ -0.35
RPE-210ENST00000438204 ZPR1O75312 459 aa12.88□□□□□ -0.35
RPE-210ENST00000438204 INTS5Q6P9B9 1019 aaKnown RBP12.88□□□□□ -0.35
RPE-210ENST00000438204 CNTROBQ8N137 903 aa12.88□□□□□ -0.35
RPE-210ENST00000438204 ZNF622Q969S3 477 aaKnown RBP eCLIP12.88□□□□□ -0.35
RPE-210ENST00000438204 EYA1Q99502 592 aa12.88□□□□□ -0.35
RPE-210ENST00000438204 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP12.88□□□□□ -0.351e-7■■□□□ 14.3
RPE-210ENST00000438204 SOS1Q07889 1333 aaPredicted RBP12.88□□□□□ -0.35
RPE-210ENST00000438204 LTBP3Q9NS15 1303 aa12.88□□□□□ -0.35
RPE-210ENST00000438204 GPR101Q96P66 508 aaPredicted RBP12.87□□□□□ -0.35
RPE-210ENST00000438204 BCL2L12Q9HB09 334 aa12.87□□□□□ -0.35
RPE-210ENST00000438204 RNF123Q5XPI4 1314 aa12.87□□□□□ -0.35
RPE-210ENST00000438204 SCN7AQ01118 1682 aa12.86□□□□□ -0.35
RPE-210ENST00000438204 COL15A1P39059 1388 aa12.86□□□□□ -0.35
RPE-210ENST00000438204 ERVV-2B6SEH9 535 aa12.86□□□□□ -0.35
RPE-210ENST00000438204 PPM1GO15355 546 aaPredicted RBP12.86□□□□□ -0.35
RPE-210ENST00000438204 EPHX2P34913 555 aa12.86□□□□□ -0.35
RPE-210ENST00000438204 CCDC24Q8N4L8 307 aa12.86□□□□□ -0.35
RPE-210ENST00000438204 CARD11Q9BXL7 1154 aa12.86□□□□□ -0.35
RPE-210ENST00000438204 HACL1Q9UJ83 578 aa12.86□□□□□ -0.35
RPE-210ENST00000438204 DDX21Q9NR30 783 aaKnown RBP eCLIP12.85□□□□□ -0.35
RPE-210ENST00000438204 SCN11AQ9UI33 1791 aa12.84□□□□□ -0.35
RPE-210ENST00000438204 ECE1P42892 770 aa12.84□□□□□ -0.35
RPE-210ENST00000438204 CABP4P57796 275 aa12.84□□□□□ -0.35
RPE-210ENST00000438204 BICDL1Q6ZP65 573 aa12.84□□□□□ -0.35
RPE-210ENST00000438204 DNAJC10Q8IXB1 793 aa12.84□□□□□ -0.35
RPE-210ENST00000438204 PUS7Q96PZ0 661 aaKnown RBP12.83□□□□□ -0.36
RPE-210ENST00000438204 SIN3AQ96ST3 1273 aa12.83□□□□□ -0.36
RPE-210ENST00000438204 NARFQ9UHQ1 456 aa12.83□□□□□ -0.36
RPE-210ENST00000438204 BCORQ6W2J9 1755 aa12.83□□□□□ -0.36
RPE-210ENST00000438204 TRAF5O00463 557 aa12.81□□□□□ -0.36
RPE-210ENST00000438204 PRPF40BQ6NWY9 871 aaKnown RBP12.81□□□□□ -0.36
RPE-210ENST00000438204 ZBTB1Q9Y2K1 713 aa12.81□□□□□ -0.36
RPE-210ENST00000438204 ZNF530Q6P9A1 599 aaPredicted RBP12.8□□□□□ -0.36
RPE-210ENST00000438204 TESK2Q96S53 571 aa12.8□□□□□ -0.36
RPE-210ENST00000438204 ZNF277Q9NRM2 450 aaPredicted RBP12.8□□□□□ -0.36
RPE-210ENST00000438204 HSP90AB1P08238 724 aaKnown RBP12.79□□□□□ -0.36
RPE-210ENST00000438204 CST9Q5W186 159 aa12.79□□□□□ -0.36
RPE-210ENST00000438204 PRR5LQ6MZQ0 368 aa12.79□□□□□ -0.36
RPE-210ENST00000438204 PNMA8AQ86V59 439 aaPredicted RBP12.79□□□□□ -0.36
RPE-210ENST00000438204 TLL2Q9Y6L7 1015 aa12.79□□□□□ -0.36
RPE-210ENST00000438204 WASHC2AQ641Q2 1341 aa12.79□□□□□ -0.36
RPE-210ENST00000438204 COL4A5P29400 1685 aa12.78□□□□□ -0.36
RPE-210ENST00000438204 CA12O43570 354 aa12.78□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 276.3 ms