RNA–Protein interactions for RNA: ENST00000435781.5

GTF3A-203, Transcript of general transcription factor IIIA, humanhuman

TSL 5

Gene GTF3A, Length 688 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3A-203ENST00000435781 TRAPPC3LQ5T215 181 aa27.54■■■□□ 2
GTF3A-203ENST00000435781 MSL1Q68DK7 614 aa27.54■■■□□ 2
GTF3A-203ENST00000435781 TEX13AQ9BXU3 409 aaPredicted RBP27.53■■■□□ 2
GTF3A-203ENST00000435781 STARD3NLO95772 234 aa27.52■■■□□ 2
GTF3A-203ENST00000435781 ARHGEF1Q92888 912 aaKnown RBP27.52■■■□□ 2
GTF3A-203ENST00000435781 ZBTB1Q9Y2K1 713 aa27.52■■■□□ 2
GTF3A-203ENST00000435781 SOS1Q07889 1333 aaPredicted RBP27.51■■□□□ 1.99
GTF3A-203ENST00000435781 POLD1P28340 1107 aa27.51■■□□□ 1.99
GTF3A-203ENST00000435781 SNRPA1P09661 255 aaKnown RBP27.49■■□□□ 1.99
GTF3A-203ENST00000435781 ARXQ96QS3 562 aa27.49■■□□□ 1.99
GTF3A-203ENST00000435781 PRAMEF22A3QJZ6 481 aa27.48■■□□□ 1.99
GTF3A-203ENST00000435781 RFC4P35249 363 aa27.48■■□□□ 1.99
GTF3A-203ENST00000435781 TSPYL4Q9UJ04 414 aa27.48■■□□□ 1.99
GTF3A-203ENST00000435781 EIF4A1P60842 406 aaKnown RBP27.47■■□□□ 1.99
GTF3A-203ENST00000435781 USP16Q9Y5T5 823 aa27.47■■□□□ 1.99
GTF3A-203ENST00000435781 COL15A1P39059 1388 aa27.47■■□□□ 1.99
GTF3A-203ENST00000435781 CANXP27824 592 aaKnown RBP27.46■■□□□ 1.99
GTF3A-203ENST00000435781 BABAM1Q9NWV8 329 aa27.46■■□□□ 1.99
GTF3A-203ENST00000435781 A1BGP04217 495 aa27.44■■□□□ 1.98
GTF3A-203ENST00000435781 USP42Q9H9J4 1324 aaKnown RBP27.43■■□□□ 1.98
GTF3A-203ENST00000435781 GYS1P13807 737 aa27.43■■□□□ 1.98
GTF3A-203ENST00000435781 SRP68Q9UHB9 627 aaKnown RBP27.43■■□□□ 1.98
GTF3A-203ENST00000435781 CHL1O00533 1208 aa27.42■■□□□ 1.98
GTF3A-203ENST00000435781 GIGYF1O75420 1035 aaPredicted RBP27.42■■□□□ 1.98
GTF3A-203ENST00000435781 EIF5P55010 431 aaKnown RBP27.42■■□□□ 1.98
GTF3A-203ENST00000435781 FHDC1Q9C0D6 1143 aaPredicted RBP27.42■■□□□ 1.98
GTF3A-203ENST00000435781 SCN7AQ01118 1682 aa27.41■■□□□ 1.98
GTF3A-203ENST00000435781 FAM9BQ8IZU0 186 aa27.41■■□□□ 1.98
GTF3A-203ENST00000435781 SENP3-EIF4A1A0A087X0R7 540 aa27.4■■□□□ 1.98
GTF3A-203ENST00000435781 IL6STP40189 918 aaPredicted RBP27.4■■□□□ 1.98
GTF3A-203ENST00000435781 NLGN1Q8N2Q7 840 aa27.4■■□□□ 1.98
GTF3A-203ENST00000435781 LAS1LQ9Y4W2 734 aaKnown RBP27.4■■□□□ 1.98
GTF3A-203ENST00000435781 BCORQ6W2J9 1755 aa27.39■■□□□ 1.98
GTF3A-203ENST00000435781 ZPR1O75312 459 aa27.38■■□□□ 1.97
GTF3A-203ENST00000435781 NARFQ9UHQ1 456 aa27.38■■□□□ 1.97
GTF3A-203ENST00000435781 MMP10P09238 476 aa27.37■■□□□ 1.97
GTF3A-203ENST00000435781 PIP4K2AP48426 406 aaPredicted RBP27.37■■□□□ 1.97
GTF3A-203ENST00000435781 CALD1Q05682 793 aaKnown RBP27.37■■□□□ 1.97
GTF3A-203ENST00000435781 CFAP44Q96MT7 982 aa27.37■■□□□ 1.97
GTF3A-203ENST00000435781 SYT17Q9BSW7 474 aa27.37■■□□□ 1.97
GTF3A-203ENST00000435781 ZNF330Q9Y3S2 320 aaPredicted RBP27.37■■□□□ 1.97
GTF3A-203ENST00000435781 A0A087WZG4 1122 aa27.36■■□□□ 1.97
GTF3A-203ENST00000435781 FKBP8Q14318 412 aa27.36■■□□□ 1.97
GTF3A-203ENST00000435781 USPL1Q5W0Q7 1092 aa27.36■■□□□ 1.97
GTF3A-203ENST00000435781 NBPF26B4DH59 902 aa27.35■■□□□ 1.97
GTF3A-203ENST00000435781 ZNF853P0CG23 659 aa27.35■■□□□ 1.97
GTF3A-203ENST00000435781 CCDC27Q2M243 656 aa27.35■■□□□ 1.97
GTF3A-203ENST00000435781 DIEXFQ68CQ4 756 aaKnown RBP27.35■■□□□ 1.97
GTF3A-203ENST00000435781 NBPF10Q6P3W6 841 aaKnown RBP27.35■■□□□ 1.97
GTF3A-203ENST00000435781 KLHL34Q8N239 644 aa27.35■■□□□ 1.97
GTF3A-203ENST00000435781 NBPF15Q8N660 670 aa27.35■■□□□ 1.97
GTF3A-203ENST00000435781 KIF13BQ9NQT8 1826 aa27.34■■□□□ 1.97
GTF3A-203ENST00000435781 NCBP3Q53F19 620 aaKnown RBP27.34■■□□□ 1.97
GTF3A-203ENST00000435781 IFT57Q9NWB7 429 aa27.34■■□□□ 1.97
GTF3A-203ENST00000435781 AFDNP55196 1824 aaKnown RBP27.33■■□□□ 1.97
GTF3A-203ENST00000435781 CCER2I3L3R5 266 aa27.33■■□□□ 1.97
GTF3A-203ENST00000435781 GNAI1P63096 354 aa27.32■■□□□ 1.96
GTF3A-203ENST00000435781 WWC1Q8IX03 1113 aa27.32■■□□□ 1.96
GTF3A-203ENST00000435781 BCL2L12Q9HB09 334 aa27.32■■□□□ 1.96
GTF3A-203ENST00000435781 MBIPQ9NS73 344 aa27.32■■□□□ 1.96
GTF3A-203ENST00000435781 TBC1D2BQ9UPU7 963 aa27.32■■□□□ 1.96
GTF3A-203ENST00000435781 KRT24Q2M2I5 525 aa27.31■■□□□ 1.96
GTF3A-203ENST00000435781 NPM2Q86SE8 214 aaKnown RBP27.31■■□□□ 1.96
GTF3A-203ENST00000435781 DZIP3Q86Y13 1208 aaKnown RBP27.29■■□□□ 1.96
GTF3A-203ENST00000435781 DDR1Q08345 913 aa27.28■■□□□ 1.96
GTF3A-203ENST00000435781 CD2APQ9Y5K6 639 aa27.28■■□□□ 1.96
GTF3A-203ENST00000435781 PARP3Q9Y6F1 533 aa27.28■■□□□ 1.96
GTF3A-203ENST00000435781 NRXN2Q9P2S2 1712 aa27.27■■□□□ 1.96
GTF3A-203ENST00000435781 ERBB4Q15303 1308 aa27.27■■□□□ 1.96
GTF3A-203ENST00000435781 CAMTA2O94983 1202 aa27.27■■□□□ 1.96
GTF3A-203ENST00000435781 TM4SF1P30408 202 aa27.27■■□□□ 1.96
GTF3A-203ENST00000435781 NLGN2Q8NFZ4 835 aa27.27■■□□□ 1.96
GTF3A-203ENST00000435781 SALL2Q9Y467 1007 aaPredicted RBP27.27■■□□□ 1.96
GTF3A-203ENST00000435781 NUP98P52948 1817 aa27.27■■□□□ 1.96
GTF3A-203ENST00000435781 EIF2S2P20042 333 aaKnown RBP27.26■■□□□ 1.95
GTF3A-203ENST00000435781 NFIXQ14938 502 aa27.26■■□□□ 1.95
GTF3A-203ENST00000435781 KIAA1551Q9HCM1 1747 aa27.26■■□□□ 1.95
GTF3A-203ENST00000435781 C10orf71Q711Q0 1435 aa27.25■■□□□ 1.95
GTF3A-203ENST00000435781 IL16Q14005 1332 aa27.24■■□□□ 1.95
GTF3A-203ENST00000435781 POLRMTO00411 1230 aaKnown RBP27.24■■□□□ 1.95
GTF3A-203ENST00000435781 N4BP2Q86UW6 1770 aaPredicted RBP27.24■■□□□ 1.95
GTF3A-203ENST00000435781 HOXB7P09629 217 aa27.23■■□□□ 1.95
GTF3A-203ENST00000435781 MYL6BP14649 208 aa27.23■■□□□ 1.95
GTF3A-203ENST00000435781 PDIA6Q15084 440 aa27.22■■□□□ 1.95
GTF3A-203ENST00000435781 DUSP27Q5VZP5 1158 aa27.22■■□□□ 1.95
GTF3A-203ENST00000435781 MIER1Q8N108 512 aa27.22■■□□□ 1.95
GTF3A-203ENST00000435781 NGEFQ8N5V2 710 aa27.22■■□□□ 1.95
GTF3A-203ENST00000435781 NECTIN2Q92692 538 aa27.22■■□□□ 1.95
GTF3A-203ENST00000435781 TBC1D9BQ66K14 1250 aa27.21■■□□□ 1.95
GTF3A-203ENST00000435781 GOLGB1Q14789 3259 aaKnown RBP27.2■■□□□ 1.95
GTF3A-203ENST00000435781 PROSER3Q2NL68 480 aa27.2■■□□□ 1.94
GTF3A-203ENST00000435781 BICDL1Q6ZP65 573 aa27.2■■□□□ 1.94
GTF3A-203ENST00000435781 LRP10Q7Z4F1 713 aa27.2■■□□□ 1.94
GTF3A-203ENST00000435781 WDR63Q8IWG1 891 aa27.2■■□□□ 1.94
GTF3A-203ENST00000435781 TSR2Q969E8 191 aaKnown RBP27.2■■□□□ 1.94
GTF3A-203ENST00000435781 ANXA1P04083 346 aa27.19■■□□□ 1.94
GTF3A-203ENST00000435781 HDGFL1Q5TGJ6 251 aa27.19■■□□□ 1.94
GTF3A-203ENST00000435781 RGL2O15211 777 aa27.18■■□□□ 1.94
GTF3A-203ENST00000435781 CLEC4GQ6UXB4 293 aa27.18■■□□□ 1.94
GTF3A-203ENST00000435781 TTLL7Q6ZT98 887 aa27.18■■□□□ 1.94
Retrieved 100 of 20,778 RNA–protein pairs in 71.5 ms