RNA–Protein interactions for RNA: ENST00000433274.6

SF1-209, Transcript of splicing factor 1, humanhuman

TSL 2 BASIC

Gene SF1, Length 2,317 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF1-209ENST00000433274 APBB1O00213 710 aa18.9■□□□□ 0.62
SF1-209ENST00000433274 SNRPA1P09661 255 aaKnown RBP18.9■□□□□ 0.62
SF1-209ENST00000433274 NKX1-1Q15270 411 aaPredicted RBP18.9■□□□□ 0.62
SF1-209ENST00000433274 MAP3K2Q9Y2U5 619 aa18.9■□□□□ 0.62
SF1-209ENST00000433274 ERVV-2B6SEH9 535 aa18.9■□□□□ 0.62
SF1-209ENST00000433274 AIMP1Q12904 312 aaKnown RBP18.9■□□□□ 0.62
SF1-209ENST00000433274 ZBTB47Q9UFB7 747 aaPredicted RBP18.9■□□□□ 0.62
SF1-209ENST00000433274 TOM1O60784 492 aa18.89■□□□□ 0.61
SF1-209ENST00000433274 MYL6BP14649 208 aa18.89■□□□□ 0.61
SF1-209ENST00000433274 USP16Q9Y5T5 823 aa18.89■□□□□ 0.61
SF1-209ENST00000433274 COL16A1Q07092 1604 aaPredicted RBP18.89■□□□□ 0.61
SF1-209ENST00000433274 PHLPP1O60346 1717 aa18.89■□□□□ 0.61
SF1-209ENST00000433274 ADAMTS2O95450 1211 aa18.89■□□□□ 0.61
SF1-209ENST00000433274 KSR2Q6VAB6 950 aa18.89■□□□□ 0.61
SF1-209ENST00000433274 SHANK3Q9BYB0 1731 aa18.88■□□□□ 0.61
SF1-209ENST00000433274 PNMA6EA0A0J9YXQ4 647 aa18.87■□□□□ 0.61
SF1-209ENST00000433274 DDX58O95786 925 aaKnown RBP18.86■□□□□ 0.61
SF1-209ENST00000433274 ATP8B2P98198 1209 aa18.86■□□□□ 0.61
SF1-209ENST00000433274 SMARCA5O60264 1052 aaPredicted RBP18.86■□□□□ 0.61
SF1-209ENST00000433274 NBPF7P0C2Y1 421 aaPredicted RBP18.86■□□□□ 0.61
SF1-209ENST00000433274 PIP4K2AP48426 406 aaPredicted RBP18.86■□□□□ 0.61
SF1-209ENST00000433274 C16orf71Q8IYS4 520 aaPredicted RBP18.85■□□□□ 0.61
SF1-209ENST00000433274 NUTM2BA6NNL0 878 aaPredicted RBP18.85■□□□□ 0.61
SF1-209ENST00000433274 NUTM2EB1AL46 878 aaPredicted RBP18.85■□□□□ 0.61
SF1-209ENST00000433274 NUTM2AQ8IVF1 878 aaPredicted RBP18.85■□□□□ 0.61
SF1-209ENST00000433274 NOP58Q9Y2X3 529 aaKnown RBP18.85■□□□□ 0.61
SF1-209ENST00000433274 ERICH6Q7L0X2 663 aa18.84■□□□□ 0.61
SF1-209ENST00000433274 XAGE3Q8WTP9 111 aa18.84■□□□□ 0.61
SF1-209ENST00000433274 EXOC6BQ9Y2D4 811 aa18.84■□□□□ 0.61
SF1-209ENST00000433274 CWF19L2Q2TBE0 894 aaKnown RBP18.84■□□□□ 0.61
SF1-209ENST00000433274 BMP2KLQ5H9B9 411 aa18.84■□□□□ 0.61
SF1-209ENST00000433274 COPS6Q7L5N1 327 aa18.84■□□□□ 0.61
SF1-209ENST00000433274 RIC3Q7Z5B4 369 aa18.84■□□□□ 0.61
SF1-209ENST00000433274 PLEKHM2Q8IWE5 1019 aa18.83■□□□□ 0.61
SF1-209ENST00000433274 DISP2A7MBM2 1401 aa18.83■□□□□ 0.6
SF1-209ENST00000433274 PTCD1O75127 700 aaKnown RBP18.83■□□□□ 0.6
SF1-209ENST00000433274 ALDH1L1O75891 902 aa18.83■□□□□ 0.6
SF1-209ENST00000433274 OTUD7AQ8TE49 926 aaPredicted RBP18.82■□□□□ 0.6
SF1-209ENST00000433274 UPF2Q9HAU5 1272 aaKnown RBP18.82■□□□□ 0.6
SF1-209ENST00000433274 TMOD3Q9NYL9 352 aa18.82■□□□□ 0.6
SF1-209ENST00000433274 C9orf78Q9NZ63 289 aaPredicted RBP18.82■□□□□ 0.6
SF1-209ENST00000433274 GLI3P10071 1580 aa18.82■□□□□ 0.6
SF1-209ENST00000433274 UBAP1LF5GYI3 381 aa18.82■□□□□ 0.6
SF1-209ENST00000433274 LRP10Q7Z4F1 713 aa18.81■□□□□ 0.6
SF1-209ENST00000433274 PPP1R42Q7Z4L9 355 aa18.81■□□□□ 0.6
SF1-209ENST00000433274 LINS1Q8NG48 757 aa18.81■□□□□ 0.6
SF1-209ENST00000433274 DDRGK1Q96HY6 314 aa18.81■□□□□ 0.6
SF1-209ENST00000433274 TOGARAM1Q9Y4F4 1720 aa18.8■□□□□ 0.6
SF1-209ENST00000433274 KCPQ6ZWJ8 1503 aa18.79■□□□□ 0.6
SF1-209ENST00000433274 SSH3Q8TE77 659 aa18.79■□□□□ 0.6
SF1-209ENST00000433274 PLCH1Q4KWH8 1693 aa18.79■□□□□ 0.6
SF1-209ENST00000433274 EXOC5O00471 708 aa18.79■□□□□ 0.6
SF1-209ENST00000433274 MFAP1P55081 439 aaKnown RBP18.79■□□□□ 0.6
SF1-209ENST00000433274 ANKRD13DQ6ZTN6 518 aa18.79■□□□□ 0.6
SF1-209ENST00000433274 SRGAP3O43295 1099 aa18.78■□□□□ 0.6
SF1-209ENST00000433274 NEXNQ0ZGT2 675 aa18.78■□□□□ 0.6
SF1-209ENST00000433274 UBR2Q8IWV8 1755 aa18.78■□□□□ 0.6
SF1-209ENST00000433274 PAPPAQ13219 1627 aa18.78■□□□□ 0.6
SF1-209ENST00000433274 IGKV5-2P06315 115 aa18.78■□□□□ 0.6
SF1-209ENST00000433274 GSPT1P15170 499 aaKnown RBP18.78■□□□□ 0.6
SF1-209ENST00000433274 PIGBQ92521 554 aa18.78■□□□□ 0.6
SF1-209ENST00000433274 MYD88Q99836 296 aa18.78■□□□□ 0.6
SF1-209ENST00000433274 LRRCC1Q9C099 1032 aa18.78■□□□□ 0.6
SF1-209ENST00000433274 IBTKQ9P2D0 1353 aaPredicted RBP18.77■□□□□ 0.6
SF1-209ENST00000433274 LAMB4A4D0S4 1761 aa18.77■□□□□ 0.6
SF1-209ENST00000433274 TNS2Q63HR2 1409 aa18.77■□□□□ 0.6
SF1-209ENST00000433274 POLA2Q14181 598 aa18.77■□□□□ 0.6
SF1-209ENST00000433274 NBPF26B4DH59 902 aa18.77■□□□□ 0.59
SF1-209ENST00000433274 GRM8O00222 908 aa18.77■□□□□ 0.59
SF1-209ENST00000433274 TTC22Q5TAA0 569 aa18.77■□□□□ 0.59
SF1-209ENST00000433274 NBPF14Q5TI25 921 aa18.77■□□□□ 0.59
SF1-209ENST00000433274 NBPF10Q6P3W6 841 aaKnown RBP18.77■□□□□ 0.59
SF1-209ENST00000433274 NBPF15Q8N660 670 aa18.77■□□□□ 0.59
SF1-209ENST00000433274 METTL22Q9BUU2 404 aaPredicted RBP18.77■□□□□ 0.59
SF1-209ENST00000433274 ASAP1Q9ULH1 1129 aa18.77■□□□□ 0.59
SF1-209ENST00000433274 TBC1D32Q96NH3 1257 aa18.76■□□□□ 0.59
SF1-209ENST00000433274 SPATA31A1Q5TZJ5 1347 aa18.76■□□□□ 0.59
SF1-209ENST00000433274 A1BGP04217 495 aa18.75■□□□□ 0.59
SF1-209ENST00000433274 ERBB4Q15303 1308 aa18.75■□□□□ 0.59
SF1-209ENST00000433274 NEURL1BA8MQ27 555 aa18.75■□□□□ 0.59
SF1-209ENST00000433274 SURF6O75683 361 aaKnown RBP18.75■□□□□ 0.59
SF1-209ENST00000433274 CCDC9Q9Y3X0 531 aaKnown RBP18.74■□□□□ 0.59
SF1-209ENST00000433274 HDAC5Q9UQL6 1122 aa18.74■□□□□ 0.59
SF1-209ENST00000433274 NRAPQ86VF7 1730 aa18.73■□□□□ 0.59
SF1-209ENST00000433274 UTYO14607 1347 aa18.73■□□□□ 0.59
SF1-209ENST00000433274 SYTL4Q96C24 671 aaPredicted RBP18.73■□□□□ 0.59
SF1-209ENST00000433274 SUCLG2Q96I99 432 aa18.73■□□□□ 0.59
SF1-209ENST00000433274 ATG3Q9NT62 314 aa18.73■□□□□ 0.59
SF1-209ENST00000433274 GCKRQ14397 625 aa18.73■□□□□ 0.59
SF1-209ENST00000433274 TBC1D9Q6ZT07 1266 aa18.73■□□□□ 0.59
SF1-209ENST00000433274 CDCA7Q9BWT1 371 aaPredicted RBP18.73■□□□□ 0.59
SF1-209ENST00000433274 THRAP3Q9Y2W1 955 aaKnown RBP18.73■□□□□ 0.59
SF1-209ENST00000433274 SLC4A3P48751 1232 aa18.72■□□□□ 0.59
SF1-209ENST00000433274 PDE1AP54750 535 aa18.72■□□□□ 0.59
SF1-209ENST00000433274 MTX1Q13505 466 aa18.72■□□□□ 0.59
SF1-209ENST00000433274 PLBD2Q8NHP8 589 aa18.72■□□□□ 0.59
SF1-209ENST00000433274 RBM42Q9BTD8 480 aaKnown RBP18.72■□□□□ 0.59
SF1-209ENST00000433274 C22orf23Q9BZE7 217 aa18.72■□□□□ 0.59
SF1-209ENST00000433274 IL1RAPL2Q9NP60 686 aa18.72■□□□□ 0.59
SF1-209ENST00000433274 WNK3Q9BYP7 1800 aa18.71■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 53 ms