RNA–Protein interactions for RNA: ENST00000431640.5

DDX56-204, Transcript of DEAD-box helicase 56, humanhuman

TSL 1 (best) BASIC

Gene DDX56, Length 1,554 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX56-204ENST00000431640 C1orf115Q9H7X2 142 aa16.02■□□□□ 0.16
DDX56-204ENST00000431640 SPG7Q9UQ90 795 aa16.02■□□□□ 0.16
DDX56-204ENST00000431640 CACNA1FO60840 1977 aa16.01■□□□□ 0.15
DDX56-204ENST00000431640 BMP2KLQ5H9B9 411 aa16.01■□□□□ 0.15
DDX56-204ENST00000431640 TRPC5Q9UL62 973 aaPredicted RBP16.01■□□□□ 0.15
DDX56-204ENST00000431640 PAPPAQ13219 1627 aa16.01■□□□□ 0.15
DDX56-204ENST00000431640 RNMTO43148 476 aaKnown RBP16■□□□□ 0.15
DDX56-204ENST00000431640 HMMRO75330 724 aa16■□□□□ 0.15
DDX56-204ENST00000431640 QTRT2Q9H974 415 aaKnown RBP16■□□□□ 0.15
DDX56-204ENST00000431640 ITGB4P16144 1822 aa15.99■□□□□ 0.15
DDX56-204ENST00000431640 HOXB7P09629 217 aa15.99■□□□□ 0.15
DDX56-204ENST00000431640 NBR1Q14596 966 aa15.99■□□□□ 0.15
DDX56-204ENST00000431640 C1orf141Q5JVX7 400 aa15.99■□□□□ 0.15
DDX56-204ENST00000431640 IFNL2Q8IZJ0 200 aa15.99■□□□□ 0.15
DDX56-204ENST00000431640 DDX54Q8TDD1 881 aaKnown RBP15.99■□□□□ 0.15
DDX56-204ENST00000431640 MARCH10Q8NA82 808 aaPredicted RBP15.98■□□□□ 0.15
DDX56-204ENST00000431640 NKX1-1Q15270 411 aaPredicted RBP15.97■□□□□ 0.15
DDX56-204ENST00000431640 EP400Q96L91 3159 aa15.96■□□□□ 0.15
DDX56-204ENST00000431640 ONECUT3O60422 494 aaPredicted RBP15.96■□□□□ 0.15
DDX56-204ENST00000431640 GNAI3P08754 354 aa15.96■□□□□ 0.15
DDX56-204ENST00000431640 FLIIQ13045 1269 aa15.96■□□□□ 0.15
DDX56-204ENST00000431640 DDB1Q16531 1140 aa15.96■□□□□ 0.15
DDX56-204ENST00000431640 CEP85Q6P2H3 762 aa15.96■□□□□ 0.15
DDX56-204ENST00000431640 G2E3Q7L622 706 aa15.96■□□□□ 0.15
DDX56-204ENST00000431640 CDCA7Q9BWT1 371 aaPredicted RBP15.96■□□□□ 0.15
DDX56-204ENST00000431640 C22orf23Q9BZE7 217 aa15.96■□□□□ 0.15
DDX56-204ENST00000431640 SLC4A3P48751 1232 aa15.96■□□□□ 0.14
DDX56-204ENST00000431640 TEFQ10587 303 aa15.96■□□□□ 0.14
DDX56-204ENST00000431640 POTEAQ6S8J7 498 aa15.96■□□□□ 0.14
DDX56-204ENST00000431640 UBR2Q8IWV8 1755 aa15.95■□□□□ 0.14
DDX56-204ENST00000431640 EXOC5O00471 708 aa15.95■□□□□ 0.14
DDX56-204ENST00000431640 SLC4A10Q6U841 1118 aa15.95■□□□□ 0.14
DDX56-204ENST00000431640 ATP10DQ9P241 1426 aa15.94■□□□□ 0.14
DDX56-204ENST00000431640 C5P01031 1676 aa15.94■□□□□ 0.14
DDX56-204ENST00000431640 GNAI2P04899 355 aa15.94■□□□□ 0.14
DDX56-204ENST00000431640 FKBP5Q13451 457 aaPredicted RBP15.94■□□□□ 0.14
DDX56-204ENST00000431640 ZNF772Q68DY9 489 aaPredicted RBP15.94■□□□□ 0.14
DDX56-204ENST00000431640 DCAF5Q96JK2 942 aa15.94■□□□□ 0.14
DDX56-204ENST00000431640 MEIS3Q99687 375 aa15.94■□□□□ 0.14
DDX56-204ENST00000431640 KCNQ3O43525 872 aa15.93■□□□□ 0.14
DDX56-204ENST00000431640 MFAP1P55081 439 aaKnown RBP15.93■□□□□ 0.14
DDX56-204ENST00000431640 EIF4A1P60842 406 aaKnown RBP15.93■□□□□ 0.14
DDX56-204ENST00000431640 HDGFL1Q5TGJ6 251 aa15.93■□□□□ 0.14
DDX56-204ENST00000431640 SEPT12Q8IYM1 358 aa15.93■□□□□ 0.14
DDX56-204ENST00000431640 SBF2Q86WG5 1849 aa15.93■□□□□ 0.14
DDX56-204ENST00000431640 BTBD11A6QL63 1104 aa15.92■□□□□ 0.14
DDX56-204ENST00000431640 FAM182BQ5T319 152 aa15.92■□□□□ 0.14
DDX56-204ENST00000431640 SLC52A2Q9HAB3 445 aa15.92■□□□□ 0.14
DDX56-204ENST00000431640 NHSQ6T4R5 1651 aa15.92■□□□□ 0.14
DDX56-204ENST00000431640 PXDNLA1KZ92 1463 aa15.92■□□□□ 0.14
DDX56-204ENST00000431640 KCPQ6ZWJ8 1503 aa15.92■□□□□ 0.14
DDX56-204ENST00000431640 F6X3S4 739 aa15.92■□□□□ 0.14
DDX56-204ENST00000431640 PLEKHM2Q8IWE5 1019 aa15.92■□□□□ 0.14
DDX56-204ENST00000431640 A0A0G2JS52 829 aa15.91■□□□□ 0.14
DDX56-204ENST00000431640 RBM25P49756 843 aaKnown RBP15.91■□□□□ 0.14
DDX56-204ENST00000431640 HSP90AB1P08238 724 aaKnown RBP15.9■□□□□ 0.14
DDX56-204ENST00000431640 RBM6P78332 1123 aaKnown RBP15.9■□□□□ 0.14
DDX56-204ENST00000431640 NFATC2IPQ8NCF5 419 aa15.9■□□□□ 0.14
DDX56-204ENST00000431640 BCL9O00512 1426 aa15.9■□□□□ 0.14
DDX56-204ENST00000431640 CDC45O75419 566 aa15.89■□□□□ 0.13
DDX56-204ENST00000431640 PTF1AQ7RTS3 328 aa15.89■□□□□ 0.13
DDX56-204ENST00000431640 ATP8B2P98198 1209 aa15.88■□□□□ 0.13
DDX56-204ENST00000431640 SLC39A6Q13433 755 aa15.88■□□□□ 0.13
DDX56-204ENST00000431640 NECTIN2Q92692 538 aa15.88■□□□□ 0.13
DDX56-204ENST00000431640 BTAF1O14981 1849 aa15.88■□□□□ 0.13
DDX56-204ENST00000431640 TTC22Q5TAA0 569 aa15.87■□□□□ 0.13
DDX56-204ENST00000431640 ACSBG1Q96GR2 724 aa15.87■□□□□ 0.13
DDX56-204ENST00000431640 N4BP2Q86UW6 1770 aaPredicted RBP15.87■□□□□ 0.13
DDX56-204ENST00000431640 ERVV-2B6SEH9 535 aa15.87■□□□□ 0.13
DDX56-204ENST00000431640 EIF2S2P20042 333 aaKnown RBP15.87■□□□□ 0.13
DDX56-204ENST00000431640 PIGBQ92521 554 aa15.87■□□□□ 0.13
DDX56-204ENST00000431640 TBC1D2Q9BYX2 928 aa15.87■□□□□ 0.13
DDX56-204ENST00000431640 HEG1Q9ULI3 1381 aa15.86■□□□□ 0.13
DDX56-204ENST00000431640 KCNQ2O43526 872 aa15.86■□□□□ 0.13
DDX56-204ENST00000431640 CABP4P57796 275 aa15.86■□□□□ 0.13
DDX56-204ENST00000431640 NFKBIBQ15653 356 aa15.86■□□□□ 0.13
DDX56-204ENST00000431640 SRCIN1Q9C0H9 1055 aa15.86■□□□□ 0.13
DDX56-204ENST00000431640 DBF4Q9UBU7 674 aaPredicted RBP15.86■□□□□ 0.13
DDX56-204ENST00000431640 LAMB4A4D0S4 1761 aa15.86■□□□□ 0.13
DDX56-204ENST00000431640 TJP1Q07157 1748 aa15.86■□□□□ 0.13
DDX56-204ENST00000431640 PRAMEF22A3QJZ6 481 aa15.85■□□□□ 0.13
DDX56-204ENST00000431640 UBTFL1P0CB47 393 aaPredicted RBP15.85■□□□□ 0.13
DDX56-204ENST00000431640 RXRBP28702 533 aa15.85■□□□□ 0.13
DDX56-204ENST00000431640 PRIM1P49642 420 aaKnown RBP15.85■□□□□ 0.13
DDX56-204ENST00000431640 CASC1Q6TDU7 716 aa15.85■□□□□ 0.13
DDX56-204ENST00000431640 TBC1D9Q6ZT07 1266 aa15.85■□□□□ 0.13
DDX56-204ENST00000431640 OSBPL3Q9H4L5 887 aa15.85■□□□□ 0.13
DDX56-204ENST00000431640 HDAC5Q9UQL6 1122 aa15.85■□□□□ 0.13
DDX56-204ENST00000431640 SNX21Q969T3 373 aa15.84■□□□□ 0.13
DDX56-204ENST00000431640 USP44Q9H0E7 712 aa15.84■□□□□ 0.13
DDX56-204ENST00000431640 PHAXQ9H814 394 aaKnown RBP15.84■□□□□ 0.13
DDX56-204ENST00000431640 ZNF790Q6PG37 636 aa15.83■□□□□ 0.13
DDX56-204ENST00000431640 C16orf71Q8IYS4 520 aaPredicted RBP15.83■□□□□ 0.13
DDX56-204ENST00000431640 ASAP1Q9ULH1 1129 aa15.83■□□□□ 0.13
DDX56-204ENST00000431640 CICQ96RK0 1608 aaPredicted RBP15.83■□□□□ 0.12
DDX56-204ENST00000431640 GIGYF1O75420 1035 aaPredicted RBP15.83■□□□□ 0.12
DDX56-204ENST00000431640 GSPT1P15170 499 aaKnown RBP15.83■□□□□ 0.12
DDX56-204ENST00000431640 HSCBQ8IWL3 235 aa15.83■□□□□ 0.12
DDX56-204ENST00000431640 DNAAF4Q8WXU2 420 aa15.83■□□□□ 0.12
DDX56-204ENST00000431640 LRRCC1Q9C099 1032 aa15.83■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 85.5 ms