RNA–Protein interactions for RNA: ENST00000431239.5

CHD1L-204, Transcript of chromodomain helicase DNA binding protein 1 like, humanhuman

TSL 5 BASIC

Gene CHD1L, Length 2,907 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD1L-204ENST00000431239 FOXD4L3Q6VB84 417 aaPredicted RBP22.55■■□□□ 1.2
CHD1L-204ENST00000431239 STAP2Q9UGK3 403 aa22.55■■□□□ 1.2
CHD1L-204ENST00000431239 DNAAF4Q8WXU2 420 aa22.55■■□□□ 1.2
CHD1L-204ENST00000431239 BABAM1Q9NWV8 329 aa22.55■■□□□ 1.2
CHD1L-204ENST00000431239 RBM27Q9P2N5 1060 aaKnown RBP22.55■■□□□ 1.2
CHD1L-204ENST00000431239 RGPD2P0DJD1 1756 aa22.55■■□□□ 1.2
CHD1L-204ENST00000431239 RHPN1Q8TCX5 695 aa22.54■■□□□ 1.2
CHD1L-204ENST00000431239 TUBGCP6Q96RT7 1819 aa22.54■■□□□ 1.2
CHD1L-204ENST00000431239 ANKLE2Q86XL3 938 aa22.54■■□□□ 1.2
CHD1L-204ENST00000431239 TRIM44Q96DX7 344 aaPredicted RBP22.54■■□□□ 1.2
CHD1L-204ENST00000431239 ORAI2Q96SN7 254 aa22.54■■□□□ 1.2
CHD1L-204ENST00000431239 ERBB4Q15303 1308 aa22.53■■□□□ 1.2
CHD1L-204ENST00000431239 PXDNLA1KZ92 1463 aa22.53■■□□□ 1.2
CHD1L-204ENST00000431239 NASPP49321 788 aaPredicted RBP22.53■■□□□ 1.2
CHD1L-204ENST00000431239 OS9Q13438 667 aaPredicted RBP22.53■■□□□ 1.2
CHD1L-204ENST00000431239 BEND3Q5T5X7 828 aa22.53■■□□□ 1.2
CHD1L-204ENST00000431239 PRAMEF22A3QJZ6 481 aa22.52■■□□□ 1.2
CHD1L-204ENST00000431239 NFAT5O94916 1531 aa22.52■■□□□ 1.19
CHD1L-204ENST00000431239 ZSCAN23Q3MJ62 389 aa22.51■■□□□ 1.19
CHD1L-204ENST00000431239 PROSER3Q2NL68 480 aa22.51■■□□□ 1.19
CHD1L-204ENST00000431239 GPT2Q8TD30 523 aa22.51■■□□□ 1.19
CHD1L-204ENST00000431239 POLA2Q14181 598 aa22.51■■□□□ 1.19
CHD1L-204ENST00000431239 PI4K2BQ8TCG2 481 aa22.5■■□□□ 1.19
CHD1L-204ENST00000431239 LARP6Q9BRS8 491 aaKnown RBP22.5■■□□□ 1.19
CHD1L-204ENST00000431239 PXDNQ92626 1479 aa22.49■■□□□ 1.19
CHD1L-204ENST00000431239 C1orf141Q5JVX7 400 aa22.49■■□□□ 1.19
CHD1L-204ENST00000431239 ADCY9O60503 1353 aa22.49■■□□□ 1.19
CHD1L-204ENST00000431239 PLEKHO1Q53GL0 409 aaPredicted RBP22.49■■□□□ 1.19
CHD1L-204ENST00000431239 AKAP4Q5JQC9 854 aa22.49■■□□□ 1.19
CHD1L-204ENST00000431239 KIF1BPQ96EK5 621 aa22.49■■□□□ 1.19
CHD1L-204ENST00000431239 NSFL1CQ9UNZ2 370 aaKnown RBP22.49■■□□□ 1.19
CHD1L-204ENST00000431239 RAB11FIP3O75154 756 aa22.48■■□□□ 1.19
CHD1L-204ENST00000431239 GCP02774 474 aa22.48■■□□□ 1.19
CHD1L-204ENST00000431239 KCNH5Q8NCM2 988 aa22.48■■□□□ 1.19
CHD1L-204ENST00000431239 USP54Q70EL1 1684 aa22.48■■□□□ 1.19
CHD1L-204ENST00000431239 ESPNB1AK53 854 aa22.48■■□□□ 1.19
CHD1L-204ENST00000431239 CWF19L2Q2TBE0 894 aaKnown RBP22.47■■□□□ 1.19
CHD1L-204ENST00000431239 CWC27Q6UX04 472 aaKnown RBP22.47■■□□□ 1.19
CHD1L-204ENST00000431239 MAP3K2Q9Y2U5 619 aa22.47■■□□□ 1.19
CHD1L-204ENST00000431239 N4BP2Q86UW6 1770 aaPredicted RBP22.47■■□□□ 1.19
CHD1L-204ENST00000431239 PA2G4Q9UQ80 394 aaKnown RBP22.47■■□□□ 1.19
CHD1L-204ENST00000431239 C9orf78Q9NZ63 289 aaPredicted RBP22.47■■□□□ 1.19
CHD1L-204ENST00000431239 SPG7Q9UQ90 795 aa22.47■■□□□ 1.19
CHD1L-204ENST00000431239 RNMTO43148 476 aaKnown RBP22.46■■□□□ 1.19
CHD1L-204ENST00000431239 MCM2P49736 904 aa22.46■■□□□ 1.19
CHD1L-204ENST00000431239 ANAPC15P60006 121 aa22.46■■□□□ 1.19
CHD1L-204ENST00000431239 AIMP1Q12904 312 aaKnown RBP22.46■■□□□ 1.19
CHD1L-204ENST00000431239 ANKRD24Q8TF21 1146 aa22.46■■□□□ 1.19
CHD1L-204ENST00000431239 CHD2O14647 1828 aaKnown RBP22.45■■□□□ 1.18
CHD1L-204ENST00000431239 CLCN1P35523 988 aa22.45■■□□□ 1.18
CHD1L-204ENST00000431239 AOX1Q06278 1338 aa22.45■■□□□ 1.18
CHD1L-204ENST00000431239 TPRNQ4KMQ1 711 aa22.45■■□□□ 1.18
CHD1L-204ENST00000431239 DTNBO60941 627 aa22.45■■□□□ 1.18
CHD1L-204ENST00000431239 NAP1L5Q96NT1 182 aaPredicted RBP22.44■■□□□ 1.18
CHD1L-204ENST00000431239 DBF4Q9UBU7 674 aaPredicted RBP22.44■■□□□ 1.18
CHD1L-204ENST00000431239 AXIN2Q9Y2T1 843 aa22.44■■□□□ 1.18
CHD1L-204ENST00000431239 MED1Q15648 1581 aaPredicted RBP22.44■■□□□ 1.18
CHD1L-204ENST00000431239 PRIM1P49642 420 aaKnown RBP22.44■■□□□ 1.18
CHD1L-204ENST00000431239 GDPD2Q9HCC8 539 aa22.44■■□□□ 1.18
CHD1L-204ENST00000431239 HOXB7P09629 217 aa22.44■■□□□ 1.18
CHD1L-204ENST00000431239 CUL4AQ13619 759 aa22.44■■□□□ 1.18
CHD1L-204ENST00000431239 CNTROBQ8N137 903 aa22.44■■□□□ 1.18
CHD1L-204ENST00000431239 KDM3BQ7LBC6 1761 aa22.43■■□□□ 1.18
CHD1L-204ENST00000431239 ADGRL3Q9HAR2 1447 aa22.43■■□□□ 1.18
CHD1L-204ENST00000431239 HSPA4P34932 840 aa22.43■■□□□ 1.18
CHD1L-204ENST00000431239 ANP32BQ92688 251 aaKnown RBP22.43■■□□□ 1.18
CHD1L-204ENST00000431239 TMEM63CQ9P1W3 806 aa22.43■■□□□ 1.18
CHD1L-204ENST00000431239 SGSM2O43147 1006 aa22.43■■□□□ 1.18
CHD1L-204ENST00000431239 ZNF445P59923 1031 aa22.43■■□□□ 1.18
CHD1L-204ENST00000431239 SYCE3A1L190 88 aa22.42■■□□□ 1.18
CHD1L-204ENST00000431239 CPA1P15085 419 aa22.42■■□□□ 1.18
CHD1L-204ENST00000431239 ARHGEF25Q86VW2 580 aa22.42■■□□□ 1.18
CHD1L-204ENST00000431239 RBSNQ9H1K0 784 aa22.42■■□□□ 1.18
CHD1L-204ENST00000431239 GIGYF1O75420 1035 aaPredicted RBP22.42■■□□□ 1.18
CHD1L-204ENST00000431239 BRD1O95696 1058 aa22.42■■□□□ 1.18
CHD1L-204ENST00000431239 RASEFQ8IZ41 740 aa22.41■■□□□ 1.18
CHD1L-204ENST00000431239 RAD50Q92878 1312 aa22.41■■□□□ 1.18
CHD1L-204ENST00000431239 ZC3H6P61129 1189 aaKnown RBP22.41■■□□□ 1.18
CHD1L-204ENST00000431239 AMOTQ4VCS5 1084 aa22.41■■□□□ 1.18
CHD1L-204ENST00000431239 CCDC173Q0VFZ6 552 aa22.4■■□□□ 1.18
CHD1L-204ENST00000431239 SNX14Q9Y5W7 946 aa22.4■■□□□ 1.18
CHD1L-204ENST00000431239 SLC39A6Q13433 755 aa22.4■■□□□ 1.18
CHD1L-204ENST00000431239 KIAA1211Q6ZU35 1233 aa22.4■■□□□ 1.18
CHD1L-204ENST00000431239 CLASRPQ8N2M8 674 aaKnown RBP22.39■■□□□ 1.18
CHD1L-204ENST00000431239 LSG1Q9H089 658 aaKnown RBP22.39■■□□□ 1.18
CHD1L-204ENST00000431239 DDX54Q8TDD1 881 aaKnown RBP22.39■■□□□ 1.17
CHD1L-204ENST00000431239 DIAPH3Q9NSV4 1193 aa22.39■■□□□ 1.17
CHD1L-204ENST00000431239 HSP90AB4PQ58FF6 505 aa22.38■■□□□ 1.17
CHD1L-204ENST00000431239 LMO7Q8WWI1 1683 aa22.38■■□□□ 1.17
CHD1L-204ENST00000431239 KSR2Q6VAB6 950 aa22.37■■□□□ 1.17
CHD1L-204ENST00000431239 INTS4Q96HW7 963 aaKnown RBP22.37■■□□□ 1.17
CHD1L-204ENST00000431239 SIL1Q9H173 461 aa22.37■■□□□ 1.17
CHD1L-204ENST00000431239 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP22.37■■□□□ 1.17
CHD1L-204ENST00000431239 IFIT2P09913 472 aaKnown RBP22.37■■□□□ 1.17
CHD1L-204ENST00000431239 AACSQ86V21 672 aa22.37■■□□□ 1.17
CHD1L-204ENST00000431239 GLRX3O76003 335 aaKnown RBP22.36■■□□□ 1.17
CHD1L-204ENST00000431239 MYL6BP14649 208 aa22.36■■□□□ 1.17
CHD1L-204ENST00000431239 AK2P54819 239 aa22.36■■□□□ 1.17
CHD1L-204ENST00000431239 RNF214Q8ND24 703 aa22.36■■□□□ 1.17
CHD1L-204ENST00000431239 CASTP20810 708 aaKnown RBP22.35■■□□□ 1.17
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms