RNA–Protein interactions for RNA: ENST00000428982.4

SYNGAP1-203, Transcript of synaptic Ras GTPase activating protein 1, humanhuman

TSL 5 BASIC

Gene SYNGAP1, Length 4,339 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGAP1-203ENST00000428982 SPC24Q8NBT2 197 aa17.17■□□□□ 0.34
SYNGAP1-203ENST00000428982 FER1L4A9Z1Z3 1794 aa17.17■□□□□ 0.34
SYNGAP1-203ENST00000428982 TMEM131LA2VDJ0 1609 aa17.17■□□□□ 0.34
SYNGAP1-203ENST00000428982 RIMS1Q86UR5 1692 aaKnown RBP17.16■□□□□ 0.34
SYNGAP1-203ENST00000428982 AK7Q96M32 723 aa17.16■□□□□ 0.34
SYNGAP1-203ENST00000428982 ARGLU1Q9NWB6 273 aaPredicted RBP17.16■□□□□ 0.34
SYNGAP1-203ENST00000428982 IBTKQ9P2D0 1353 aaPredicted RBP17.15■□□□□ 0.34
SYNGAP1-203ENST00000428982 CCDC91Q7Z6B0 441 aa17.15■□□□□ 0.34
SYNGAP1-203ENST00000428982 PDLIM2Q96JY6 352 aa17.15■□□□□ 0.34
SYNGAP1-203ENST00000428982 PPLO60437 1756 aa17.15■□□□□ 0.34
SYNGAP1-203ENST00000428982 NPHP3Q7Z494 1330 aa17.15■□□□□ 0.34
SYNGAP1-203ENST00000428982 ELL2O00472 640 aaPredicted RBP17.15■□□□□ 0.34
SYNGAP1-203ENST00000428982 ZRANB1Q9UGI0 708 aa17.15■□□□□ 0.34
SYNGAP1-203ENST00000428982 ZC3H6P61129 1189 aaKnown RBP17.14■□□□□ 0.33
SYNGAP1-203ENST00000428982 ICE2Q659A1 982 aa17.14■□□□□ 0.33
SYNGAP1-203ENST00000428982 LEKR1Q6ZMV7 388 aa17.14■□□□□ 0.33
SYNGAP1-203ENST00000428982 MNS1Q8NEH6 495 aa17.14■□□□□ 0.33
SYNGAP1-203ENST00000428982 FBLN1P23142 703 aa17.14■□□□□ 0.33
SYNGAP1-203ENST00000428982 BMS1Q14692 1282 aaKnown RBP17.13■□□□□ 0.33
SYNGAP1-203ENST00000428982 TWISTNBQ3B726 338 aaPredicted RBP17.13■□□□□ 0.33
SYNGAP1-203ENST00000428982 POLR3GO15318 223 aaPredicted RBP17.13■□□□□ 0.33
SYNGAP1-203ENST00000428982 PLCD4Q9BRC7 762 aa17.13■□□□□ 0.33
SYNGAP1-203ENST00000428982 PHF23Q9BUL5 403 aaPredicted RBP17.13■□□□□ 0.33
SYNGAP1-203ENST00000428982 PRDM11Q9NQV5 511 aa17.13■□□□□ 0.33
SYNGAP1-203ENST00000428982 QRICH2Q9H0J4 1663 aa17.13■□□□□ 0.33
SYNGAP1-203ENST00000428982 ADCY5O95622 1261 aa17.13■□□□□ 0.33
SYNGAP1-203ENST00000428982 FOXD4L6Q3SYB3 417 aaPredicted RBP17.13■□□□□ 0.33
SYNGAP1-203ENST00000428982 FOXD4L3Q6VB84 417 aaPredicted RBP17.13■□□□□ 0.33
SYNGAP1-203ENST00000428982 NCAPGQ9BPX3 1015 aa17.13■□□□□ 0.33
SYNGAP1-203ENST00000428982 ZBTB40Q9NUA8 1239 aa17.13■□□□□ 0.33
SYNGAP1-203ENST00000428982 POLKQ9UBT6 870 aa17.13■□□□□ 0.33
SYNGAP1-203ENST00000428982 TTC31Q49AM3 519 aaPredicted RBP17.12■□□□□ 0.33
SYNGAP1-203ENST00000428982 CCDC191Q8NCU4 936 aa17.12■□□□□ 0.33
SYNGAP1-203ENST00000428982 ZNF397Q8NF99 534 aaPredicted RBP17.12■□□□□ 0.33
SYNGAP1-203ENST00000428982 FEZ2Q9UHY8 353 aaPredicted RBP17.12■□□□□ 0.33
SYNGAP1-203ENST00000428982 C16orf45Q96MC5 204 aaPredicted RBP17.12■□□□□ 0.33
SYNGAP1-203ENST00000428982 MCM2P49736 904 aa17.12■□□□□ 0.33
SYNGAP1-203ENST00000428982 HNRNPH2P55795 449 aaKnown RBP17.12■□□□□ 0.33
SYNGAP1-203ENST00000428982 PLEKHO1Q53GL0 409 aaPredicted RBP17.12■□□□□ 0.33
SYNGAP1-203ENST00000428982 CEP83Q9Y592 693 aa17.12■□□□□ 0.33
SYNGAP1-203ENST00000428982 ATP7BP35670 1465 aa17.11■□□□□ 0.33
SYNGAP1-203ENST00000428982 A0A1B0GUL7 405 aa17.11■□□□□ 0.33
SYNGAP1-203ENST00000428982 SLFN14P0C7P3 912 aa17.11■□□□□ 0.33
SYNGAP1-203ENST00000428982 RPAP2Q8IXW5 612 aaPredicted RBP17.11■□□□□ 0.33
SYNGAP1-203ENST00000428982 ZNF526Q8TF50 670 aaPredicted RBP17.11■□□□□ 0.33
SYNGAP1-203ENST00000428982 BRMS1Q9HCU9 246 aa17.11■□□□□ 0.33
SYNGAP1-203ENST00000428982 PTPRMP28827 1452 aa17.1■□□□□ 0.33
SYNGAP1-203ENST00000428982 TNNQ9UQP3 1299 aa17.1■□□□□ 0.33
SYNGAP1-203ENST00000428982 SSR1P43307 286 aaKnown RBP17.1■□□□□ 0.33
SYNGAP1-203ENST00000428982 SETD1BQ9UPS6 1966 aaKnown RBP17.1■□□□□ 0.33
SYNGAP1-203ENST00000428982 CASQ1P31415 396 aa17.1■□□□□ 0.33
SYNGAP1-203ENST00000428982 HSP90AB3PQ58FF7 597 aa17.1■□□□□ 0.33
SYNGAP1-203ENST00000428982 KRBA2Q6ZNG9 492 aa17.1■□□□□ 0.33
SYNGAP1-203ENST00000428982 TSPYL4Q9UJ04 414 aa17.1■□□□□ 0.33
SYNGAP1-203ENST00000428982 RAD51AP2Q09MP3 1159 aa17.09■□□□□ 0.33
SYNGAP1-203ENST00000428982 FKBP5Q13451 457 aaPredicted RBP17.09■□□□□ 0.33
SYNGAP1-203ENST00000428982 CCDC172P0C7W6 258 aa17.09■□□□□ 0.33
SYNGAP1-203ENST00000428982 NRDCO43847 1150 aa17.09■□□□□ 0.33
SYNGAP1-203ENST00000428982 EIF2AK3Q9NZJ5 1116 aaKnown RBP17.09■□□□□ 0.33
SYNGAP1-203ENST00000428982 CEP170BQ9Y4F5 1589 aaPredicted RBP17.08■□□□□ 0.33
SYNGAP1-203ENST00000428982 ORAI2Q96SN7 254 aa17.08■□□□□ 0.32
SYNGAP1-203ENST00000428982 DDX41Q9UJV9 622 aaKnown RBP17.08■□□□□ 0.32
SYNGAP1-203ENST00000428982 UVSSAQ2YD98 709 aa17.08■□□□□ 0.32
SYNGAP1-203ENST00000428982 PAXBP1Q9Y5B6 917 aa17.08■□□□□ 0.32
SYNGAP1-203ENST00000428982 DLC1Q96QB1 1528 aa17.08■□□□□ 0.32
SYNGAP1-203ENST00000428982 ADGRB1O14514 1584 aa17.08■□□□□ 0.32
SYNGAP1-203ENST00000428982 TATP17735 454 aaPredicted RBP17.07■□□□□ 0.32
SYNGAP1-203ENST00000428982 SMTNL1A8MU46 457 aa17.07■□□□□ 0.32
SYNGAP1-203ENST00000428982 HSP90AB2PQ58FF8 381 aa17.07■□□□□ 0.32
SYNGAP1-203ENST00000428982 LRRFIP2Q9Y608 721 aaKnown RBP17.07■□□□□ 0.32
SYNGAP1-203ENST00000428982 ADAMTS13Q76LX8 1427 aa17.06■□□□□ 0.32
SYNGAP1-203ENST00000428982 DHX16O60231 1041 aaKnown RBP17.06■□□□□ 0.32
SYNGAP1-203ENST00000428982 PIP4K2BP78356 416 aa17.06■□□□□ 0.32
SYNGAP1-203ENST00000428982 RNF20Q5VTR2 975 aa17.06■□□□□ 0.32
SYNGAP1-203ENST00000428982 KCNG1Q9UIX4 513 aa17.06■□□□□ 0.32
SYNGAP1-203ENST00000428982 PRR36Q9H6K5 1346 aa17.06■□□□□ 0.32
SYNGAP1-203ENST00000428982 OS9Q13438 667 aaPredicted RBP17.06■□□□□ 0.32
SYNGAP1-203ENST00000428982 CNKSR2Q8WXI2 1034 aa17.06■□□□□ 0.32
SYNGAP1-203ENST00000428982 APBB1O00213 710 aa17.06■□□□□ 0.32
SYNGAP1-203ENST00000428982 STRN4Q9NRL3 753 aa17.06■□□□□ 0.32
SYNGAP1-203ENST00000428982 TMEM94Q12767 1356 aa17.05■□□□□ 0.32
SYNGAP1-203ENST00000428982 ZRSR1Q15695 479 aaKnown RBP17.05■□□□□ 0.32
SYNGAP1-203ENST00000428982 FLT4P35916 1363 aa17.05■□□□□ 0.32
SYNGAP1-203ENST00000428982 CAPN2P17655 700 aa17.05■□□□□ 0.32
SYNGAP1-203ENST00000428982 SIGLEC1Q9BZZ2 1709 aa17.05■□□□□ 0.32
SYNGAP1-203ENST00000428982 ZNF530Q6P9A1 599 aaPredicted RBP17.05■□□□□ 0.32
SYNGAP1-203ENST00000428982 TOM1L2Q6ZVM7 507 aa17.05■□□□□ 0.32
SYNGAP1-203ENST00000428982 CTNNA3Q9UI47 895 aa17.05■□□□□ 0.32
SYNGAP1-203ENST00000428982 JRKLQ9Y4A0 524 aa17.05■□□□□ 0.32
SYNGAP1-203ENST00000428982 ANKRD20A12PQ8NF67 263 aa17.05■□□□□ 0.32
SYNGAP1-203ENST00000428982 RBM28Q9NW13 759 aaKnown RBP17.05■□□□□ 0.32
SYNGAP1-203ENST00000428982 USP8P40818 1118 aa17.04■□□□□ 0.32
SYNGAP1-203ENST00000428982 MMP14P50281 582 aa17.04■□□□□ 0.32
SYNGAP1-203ENST00000428982 TBC1D9Q6ZT07 1266 aa17.04■□□□□ 0.32
SYNGAP1-203ENST00000428982 CT47A1Q5JQC4 288 aaPredicted RBP17.04■□□□□ 0.32
SYNGAP1-203ENST00000428982 GTF3C6Q969F1 213 aa17.04■□□□□ 0.32
SYNGAP1-203ENST00000428982 TRIM35Q9UPQ4 493 aa17.04■□□□□ 0.32
SYNGAP1-203ENST00000428982 EP400NLQ6ZTU2 488 aa17.03■□□□□ 0.32
SYNGAP1-203ENST00000428982 TTC5Q8N0Z6 440 aa17.03■□□□□ 0.32
SYNGAP1-203ENST00000428982 GIMAP7Q8NHV1 300 aa17.03■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms