RNA–Protein interactions for RNA: ENST00000421689.6

CAST-208, Transcript of calpastatin, humanhuman

TSL 5

Gene CAST, Length 913 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAST-208ENST00000421689 STARD3NLO95772 234 aa15.23■□□□□ 0.03
CAST-208ENST00000421689 TWISTNBQ3B726 338 aaPredicted RBP15.23■□□□□ 0.03
CAST-208ENST00000421689 TSPYL6Q8N831 410 aa15.23■□□□□ 0.03
CAST-208ENST00000421689 CHMP4AQ9BY43 222 aa15.23■□□□□ 0.03
CAST-208ENST00000421689 USP16Q9Y5T5 823 aa15.23■□□□□ 0.03
CAST-208ENST00000421689 LINC00116Q8NCU8 138 aa15.22■□□□□ 0.03
CAST-208ENST00000421689 C4BP0C0L5 1744 aa15.21■□□□□ 0.03
CAST-208ENST00000421689 NUP188Q5SRE5 1749 aa15.21■□□□□ 0.03
CAST-208ENST00000421689 VAMP4O75379 141 aa15.21■□□□□ 0.03
CAST-208ENST00000421689 CYP19A1P11511 503 aaPredicted RBP15.21■□□□□ 0.03
CAST-208ENST00000421689 CT47B1P0C2W7 299 aaPredicted RBP15.2■□□□□ 0.02
CAST-208ENST00000421689 EIF2S2P20042 333 aaKnown RBP15.2■□□□□ 0.02
CAST-208ENST00000421689 RC3H1Q5TC82 1133 aaKnown RBP15.2■□□□□ 0.02
CAST-208ENST00000421689 CNTNAP4Q9C0A0 1308 aa15.19■□□□□ 0.02
CAST-208ENST00000421689 CRKLP46109 303 aaKnown RBP15.19■□□□□ 0.02
CAST-208ENST00000421689 HDGFL1Q5TGJ6 251 aa15.19■□□□□ 0.02
CAST-208ENST00000421689 CCDC87Q9NVE4 849 aa15.19■□□□□ 0.02
CAST-208ENST00000421689 ERBB4Q15303 1308 aa15.18■□□□□ 0.02
CAST-208ENST00000421689 MYH14Q7Z406 1995 aaKnown RBP15.18■□□□□ 0.02
CAST-208ENST00000421689 SOCS7O14512 581 aa15.18■□□□□ 0.02
CAST-208ENST00000421689 CCDC30Q5VVM6 783 aa15.18■□□□□ 0.02
CAST-208ENST00000421689 ZNF428Q96B54 188 aa15.18■□□□□ 0.02
CAST-208ENST00000421689 AK7Q96M32 723 aa15.18■□□□□ 0.02
CAST-208ENST00000421689 A1BGP04217 495 aa15.17■□□□□ 0.02
CAST-208ENST00000421689 INTS5Q6P9B9 1019 aaKnown RBP15.17■□□□□ 0.02
CAST-208ENST00000421689 NECTIN2Q92692 538 aa15.17■□□□□ 0.02
CAST-208ENST00000421689 CACNA1FO60840 1977 aa15.16■□□□□ 0.02
CAST-208ENST00000421689 CANXP27824 592 aaKnown RBP15.16■□□□□ 0.02
CAST-208ENST00000421689 NBPF14Q5TI25 921 aa15.16■□□□□ 0.02
CAST-208ENST00000421689 AKT1S1Q96B36 256 aa15.16■□□□□ 0.02
CAST-208ENST00000421689 STK31Q9BXU1 1019 aa15.16■□□□□ 0.02
CAST-208ENST00000421689 STK32BQ9NY57 414 aa15.16■□□□□ 0.02
CAST-208ENST00000421689 DBF4Q9UBU7 674 aaPredicted RBP15.16■□□□□ 0.02
CAST-208ENST00000421689 ZBTB1Q9Y2K1 713 aa15.16■□□□□ 0.02
CAST-208ENST00000421689 UBR3Q6ZT12 1888 aa15.16■□□□□ 0.02
CAST-208ENST00000421689 GNPATO15228 680 aa15.15■□□□□ 0.02
CAST-208ENST00000421689 RPS6KA4O75676 772 aa15.15■□□□□ 0.02
CAST-208ENST00000421689 IL6STP40189 918 aaPredicted RBP15.15■□□□□ 0.02
CAST-208ENST00000421689 SLC15A2Q16348 729 aa15.15■□□□□ 0.02
CAST-208ENST00000421689 DDX21Q9NR30 783 aaKnown RBP eCLIP15.15■□□□□ 0.02
CAST-208ENST00000421689 CHPF2Q9P2E5 772 aa15.15■□□□□ 0.02
CAST-208ENST00000421689 RTCBQ9Y3I0 505 aaKnown RBP15.15■□□□□ 0.02
CAST-208ENST00000421689 NBPF26B4DH59 902 aa15.14■□□□□ 0.01
CAST-208ENST00000421689 PDIA6Q15084 440 aa15.14■□□□□ 0.01
CAST-208ENST00000421689 ZNF827Q17R98 1081 aa15.14■□□□□ 0.01
CAST-208ENST00000421689 ALDH1L2Q3SY69 923 aa15.14■□□□□ 0.01
CAST-208ENST00000421689 NBPF10Q6P3W6 841 aaKnown RBP15.14■□□□□ 0.01
CAST-208ENST00000421689 NPM2Q86SE8 214 aaKnown RBP15.14■□□□□ 0.01
CAST-208ENST00000421689 NBPF15Q8N660 670 aa15.14■□□□□ 0.01
CAST-208ENST00000421689 TFCP2L1Q9NZI6 479 aa15.14■□□□□ 0.01
CAST-208ENST00000421689 TUBGCP6Q96RT7 1819 aa15.13■□□□□ 0.01
CAST-208ENST00000421689 MYL6BP14649 208 aa15.13■□□□□ 0.01
CAST-208ENST00000421689 PIP4K2AP48426 406 aaPredicted RBP15.13■□□□□ 0.01
CAST-208ENST00000421689 EIF5P55010 431 aaKnown RBP15.13■□□□□ 0.01
CAST-208ENST00000421689 QSER1Q2KHR3 1735 aa15.13■□□□□ 0.01
CAST-208ENST00000421689 HYPKQ9NX55 129 aa15.13■□□□□ 0.01
CAST-208ENST00000421689 TCERG1O14776 1098 aaKnown RBP15.12■□□□□ 0.01
CAST-208ENST00000421689 ANXA1P04083 346 aa15.12■□□□□ 0.01
CAST-208ENST00000421689 SLC4A2P04920 1241 aa15.12■□□□□ 0.01
CAST-208ENST00000421689 SSFA2P28290 1259 aa15.12■□□□□ 0.01
CAST-208ENST00000421689 PROSER3Q2NL68 480 aa15.12■□□□□ 0.01
CAST-208ENST00000421689 TRAPPC3LQ5T215 181 aa15.12■□□□□ 0.01
CAST-208ENST00000421689 FLAD1Q8NFF5 587 aa15.12■□□□□ 0.01
CAST-208ENST00000421689 ANO8Q9HCE9 1232 aaPredicted RBP15.12■□□□□ 0.01
CAST-208ENST00000421689 A0A087WZG4 1122 aa15.11■□□□□ 0.01
CAST-208ENST00000421689 RARSP54136 660 aaKnown RBP15.11■□□□□ 0.01
CAST-208ENST00000421689 ZNF330Q9Y3S2 320 aaPredicted RBP15.11■□□□□ 0.01
CAST-208ENST00000421689 COL15A1P39059 1388 aa15.11■□□□□ 0.01
CAST-208ENST00000421689 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP15.1■□□□□ 0.01
CAST-208ENST00000421689 LRP10Q7Z4F1 713 aa15.1■□□□□ 0.01
CAST-208ENST00000421689 MRPL50Q8N5N7 158 aaKnown RBP15.1■□□□□ 0.01
CAST-208ENST00000421689 SSH1Q8WYL5 1049 aa15.1■□□□□ 0.01
CAST-208ENST00000421689 SMC4Q9NTJ3 1288 aa15.1■□□□□ 0.01
CAST-208ENST00000421689 PHF14O94880 888 aa15.09■□□□□ 0.01
CAST-208ENST00000421689 COPS6Q7L5N1 327 aa15.09■□□□□ 0.01
CAST-208ENST00000421689 AMIGO3Q86WK7 504 aa15.09■□□□□ 0.01
CAST-208ENST00000421689 ARHGEF1Q92888 912 aaKnown RBP15.09■□□□□ 0.01
CAST-208ENST00000421689 PHAXQ9H814 394 aaKnown RBP15.09■□□□□ 0.01
CAST-208ENST00000421689 C4AP0C0L4 1744 aa15.09■□□□□ 0.01
CAST-208ENST00000421689 RFC4P35249 363 aa15.08■□□□□ 0
CAST-208ENST00000421689 BRPF1P55201 1214 aaPredicted RBP15.08■□□□□ 0
CAST-208ENST00000421689 SMIM5Q71RC9 77 aa15.08■□□□□ 0
CAST-208ENST00000421689 XAGE3Q8WTP9 111 aa15.08■□□□□ 0
CAST-208ENST00000421689 ARXQ96QS3 562 aa15.08■□□□□ 0
CAST-208ENST00000421689 BCL2L13Q9BXK5 485 aa15.08■□□□□ 0
CAST-208ENST00000421689 RCAN3Q9UKA8 241 aa15.08■□□□□ 0
CAST-208ENST00000421689 PNPLA7Q6ZV29 1317 aa15.08■□□□□ 0
CAST-208ENST00000421689 AIMP1Q12904 312 aaKnown RBP15.07■□□□□ 0
CAST-208ENST00000421689 FLIIQ13045 1269 aa15.07■□□□□ 0
CAST-208ENST00000421689 KIF6Q6ZMV9 814 aa15.07■□□□□ 0
CAST-208ENST00000421689 G2E3Q7L622 706 aa15.07■□□□□ 0
CAST-208ENST00000421689 DZIP3Q86Y13 1208 aaKnown RBP15.07■□□□□ 0
CAST-208ENST00000421689 COL23A1Q86Y22 540 aaPredicted RBP15.07■□□□□ 0
CAST-208ENST00000421689 NARFQ9UHQ1 456 aa15.07■□□□□ 0
CAST-208ENST00000421689 TBC1D2BQ9UPU7 963 aa15.07■□□□□ 0
CAST-208ENST00000421689 ZPR1O75312 459 aa15.06■□□□□ 0
CAST-208ENST00000421689 BCAR3O75815 825 aa15.06■□□□□ 0
CAST-208ENST00000421689 DDX58O95786 925 aaKnown RBP15.06■□□□□ 0
CAST-208ENST00000421689 TTLL7Q6ZT98 887 aa15.06■□□□□ 0
CAST-208ENST00000421689 BCORQ6W2J9 1755 aa15.06■□□□□ 0
Retrieved 100 of 20,778 RNA–protein pairs in 82.5 ms