RNA–Protein interactions for RNA: ENST00000421368.2

MSL3-208, Transcript of MSL complex subunit 3, humanhuman

TSL 5

Gene MSL3, Length 795 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSL3-208ENST00000421368 MSL1Q68DK7 614 aa23.41■■□□□ 1.34
MSL3-208ENST00000421368 ARHGEF1Q92888 912 aaKnown RBP23.4■■□□□ 1.34
MSL3-208ENST00000421368 TEX13AQ9BXU3 409 aaPredicted RBP23.4■■□□□ 1.34
MSL3-208ENST00000421368 PPP1R1BQ9UD71 204 aaPredicted RBP23.4■■□□□ 1.34
MSL3-208ENST00000421368 ZBTB1Q9Y2K1 713 aa23.4■■□□□ 1.34
MSL3-208ENST00000421368 SOS1Q07889 1333 aaPredicted RBP23.39■■□□□ 1.34
MSL3-208ENST00000421368 PRAMEF22A3QJZ6 481 aa23.39■■□□□ 1.33
MSL3-208ENST00000421368 STARD3NLO95772 234 aa23.39■■□□□ 1.33
MSL3-208ENST00000421368 SNRPA1P09661 255 aaKnown RBP23.37■■□□□ 1.33
MSL3-208ENST00000421368 EIF4A1P60842 406 aaKnown RBP23.37■■□□□ 1.33
MSL3-208ENST00000421368 TSPYL4Q9UJ04 414 aa23.37■■□□□ 1.33
MSL3-208ENST00000421368 USP16Q9Y5T5 823 aa23.37■■□□□ 1.33
MSL3-208ENST00000421368 POLD1P28340 1107 aa23.36■■□□□ 1.33
MSL3-208ENST00000421368 BABAM1Q9NWV8 329 aa23.36■■□□□ 1.33
MSL3-208ENST00000421368 COL15A1P39059 1388 aa23.36■■□□□ 1.33
MSL3-208ENST00000421368 SENP3-EIF4A1A0A087X0R7 540 aa23.35■■□□□ 1.33
MSL3-208ENST00000421368 CANXP27824 592 aaKnown RBP23.35■■□□□ 1.33
MSL3-208ENST00000421368 RFC4P35249 363 aa23.35■■□□□ 1.33
MSL3-208ENST00000421368 FAM9BQ8IZU0 186 aa23.35■■□□□ 1.33
MSL3-208ENST00000421368 ARXQ96QS3 562 aa23.35■■□□□ 1.33
MSL3-208ENST00000421368 A1BGP04217 495 aa23.34■■□□□ 1.33
MSL3-208ENST00000421368 CHL1O00533 1208 aa23.33■■□□□ 1.33
MSL3-208ENST00000421368 SRP68Q9UHB9 627 aaKnown RBP23.33■■□□□ 1.33
MSL3-208ENST00000421368 USP42Q9H9J4 1324 aaKnown RBP23.33■■□□□ 1.32
MSL3-208ENST00000421368 GIGYF1O75420 1035 aaPredicted RBP23.32■■□□□ 1.32
MSL3-208ENST00000421368 GYS1P13807 737 aa23.32■■□□□ 1.32
MSL3-208ENST00000421368 EIF5P55010 431 aaKnown RBP23.32■■□□□ 1.32
MSL3-208ENST00000421368 SCN7AQ01118 1682 aa23.32■■□□□ 1.32
MSL3-208ENST00000421368 DIEXFQ68CQ4 756 aaKnown RBP23.31■■□□□ 1.32
MSL3-208ENST00000421368 LAS1LQ9Y4W2 734 aaKnown RBP23.31■■□□□ 1.32
MSL3-208ENST00000421368 BCORQ6W2J9 1755 aa23.31■■□□□ 1.32
MSL3-208ENST00000421368 FHDC1Q9C0D6 1143 aaPredicted RBP23.3■■□□□ 1.32
MSL3-208ENST00000421368 IL6STP40189 918 aaPredicted RBP23.29■■□□□ 1.32
MSL3-208ENST00000421368 PIP4K2AP48426 406 aaPredicted RBP23.29■■□□□ 1.32
MSL3-208ENST00000421368 CFAP44Q96MT7 982 aa23.29■■□□□ 1.32
MSL3-208ENST00000421368 CCER2I3L3R5 266 aa23.28■■□□□ 1.32
MSL3-208ENST00000421368 ZNF853P0CG23 659 aa23.28■■□□□ 1.32
MSL3-208ENST00000421368 CCDC27Q2M243 656 aa23.28■■□□□ 1.32
MSL3-208ENST00000421368 NLGN1Q8N2Q7 840 aa23.28■■□□□ 1.32
MSL3-208ENST00000421368 NARFQ9UHQ1 456 aa23.28■■□□□ 1.32
MSL3-208ENST00000421368 NBPF26B4DH59 902 aa23.27■■□□□ 1.32
MSL3-208ENST00000421368 ZPR1O75312 459 aa23.27■■□□□ 1.32
MSL3-208ENST00000421368 USPL1Q5W0Q7 1092 aa23.27■■□□□ 1.32
MSL3-208ENST00000421368 NBPF10Q6P3W6 841 aaKnown RBP23.27■■□□□ 1.32
MSL3-208ENST00000421368 NBPF15Q8N660 670 aa23.27■■□□□ 1.32
MSL3-208ENST00000421368 ZNF330Q9Y3S2 320 aaPredicted RBP23.27■■□□□ 1.32
MSL3-208ENST00000421368 AFDNP55196 1824 aaKnown RBP23.26■■□□□ 1.31
MSL3-208ENST00000421368 MMP10P09238 476 aa23.26■■□□□ 1.31
MSL3-208ENST00000421368 CALD1Q05682 793 aaKnown RBP23.26■■□□□ 1.31
MSL3-208ENST00000421368 FKBP8Q14318 412 aa23.26■■□□□ 1.31
MSL3-208ENST00000421368 NCBP3Q53F19 620 aaKnown RBP23.26■■□□□ 1.31
MSL3-208ENST00000421368 MBIPQ9NS73 344 aa23.26■■□□□ 1.31
MSL3-208ENST00000421368 IFT57Q9NWB7 429 aa23.26■■□□□ 1.31
MSL3-208ENST00000421368 KIF13BQ9NQT8 1826 aa23.26■■□□□ 1.31
MSL3-208ENST00000421368 A0A087WZG4 1122 aa23.25■■□□□ 1.31
MSL3-208ENST00000421368 KRT24Q2M2I5 525 aa23.25■■□□□ 1.31
MSL3-208ENST00000421368 WWC1Q8IX03 1113 aa23.25■■□□□ 1.31
MSL3-208ENST00000421368 SYT17Q9BSW7 474 aa23.25■■□□□ 1.31
MSL3-208ENST00000421368 GNAI1P63096 354 aa23.24■■□□□ 1.31
MSL3-208ENST00000421368 KLHL34Q8N239 644 aa23.24■■□□□ 1.31
MSL3-208ENST00000421368 BCL2L12Q9HB09 334 aa23.24■■□□□ 1.31
MSL3-208ENST00000421368 TBC1D2BQ9UPU7 963 aa23.23■■□□□ 1.31
MSL3-208ENST00000421368 SALL2Q9Y467 1007 aaPredicted RBP23.22■■□□□ 1.31
MSL3-208ENST00000421368 NUP98P52948 1817 aa23.22■■□□□ 1.31
MSL3-208ENST00000421368 NPM2Q86SE8 214 aaKnown RBP23.21■■□□□ 1.31
MSL3-208ENST00000421368 MIER1Q8N108 512 aa23.21■■□□□ 1.31
MSL3-208ENST00000421368 NRXN2Q9P2S2 1712 aa23.2■■□□□ 1.3
MSL3-208ENST00000421368 CAMTA2O94983 1202 aa23.2■■□□□ 1.3
MSL3-208ENST00000421368 DDR1Q08345 913 aa23.2■■□□□ 1.3
MSL3-208ENST00000421368 DZIP3Q86Y13 1208 aaKnown RBP23.2■■□□□ 1.3
MSL3-208ENST00000421368 KIAA1551Q9HCM1 1747 aa23.19■■□□□ 1.3
MSL3-208ENST00000421368 ERBB4Q15303 1308 aa23.19■■□□□ 1.3
MSL3-208ENST00000421368 EIF2S2P20042 333 aaKnown RBP23.19■■□□□ 1.3
MSL3-208ENST00000421368 TM4SF1P30408 202 aa23.19■■□□□ 1.3
MSL3-208ENST00000421368 NLGN2Q8NFZ4 835 aa23.18■■□□□ 1.3
MSL3-208ENST00000421368 PARP3Q9Y6F1 533 aa23.18■■□□□ 1.3
MSL3-208ENST00000421368 N4BP2Q86UW6 1770 aaPredicted RBP23.17■■□□□ 1.3
MSL3-208ENST00000421368 IL16Q14005 1332 aa23.17■■□□□ 1.3
MSL3-208ENST00000421368 MYL6BP14649 208 aa23.17■■□□□ 1.3
MSL3-208ENST00000421368 NFIXQ14938 502 aa23.17■■□□□ 1.3
MSL3-208ENST00000421368 PDIA6Q15084 440 aa23.17■■□□□ 1.3
MSL3-208ENST00000421368 CD2APQ9Y5K6 639 aa23.17■■□□□ 1.3
MSL3-208ENST00000421368 C10orf71Q711Q0 1435 aa23.16■■□□□ 1.3
MSL3-208ENST00000421368 POLRMTO00411 1230 aaKnown RBP23.16■■□□□ 1.3
MSL3-208ENST00000421368 HOXB7P09629 217 aa23.16■■□□□ 1.3
MSL3-208ENST00000421368 DUSP27Q5VZP5 1158 aa23.16■■□□□ 1.3
MSL3-208ENST00000421368 NGEFQ8N5V2 710 aa23.16■■□□□ 1.3
MSL3-208ENST00000421368 NECTIN2Q92692 538 aa23.16■■□□□ 1.3
MSL3-208ENST00000421368 TSR2Q969E8 191 aaKnown RBP23.16■■□□□ 1.3
MSL3-208ENST00000421368 PROSER3Q2NL68 480 aa23.15■■□□□ 1.3
MSL3-208ENST00000421368 LRP10Q7Z4F1 713 aa23.15■■□□□ 1.3
MSL3-208ENST00000421368 WDR63Q8IWG1 891 aa23.15■■□□□ 1.3
MSL3-208ENST00000421368 ANXA1P04083 346 aa23.14■■□□□ 1.29
MSL3-208ENST00000421368 TBC1D9BQ66K14 1250 aa23.14■■□□□ 1.29
MSL3-208ENST00000421368 HDGFL1Q5TGJ6 251 aa23.13■■□□□ 1.29
MSL3-208ENST00000421368 BICDL1Q6ZP65 573 aa23.13■■□□□ 1.29
MSL3-208ENST00000421368 C8orf58Q8NAV2 365 aa23.13■■□□□ 1.29
MSL3-208ENST00000421368 GOLGB1Q14789 3259 aaKnown RBP23.13■■□□□ 1.29
MSL3-208ENST00000421368 BRCA1P38398 1863 aaKnown RBP23.12■■□□□ 1.29
MSL3-208ENST00000421368 TTLL7Q6ZT98 887 aa23.12■■□□□ 1.29
Retrieved 100 of 20,778 RNA–protein pairs in 172.5 ms