RNA–Protein interactions for RNA: ENST00000420973.5

CHRD-204, Transcript of chordin, humanhuman

TSL 1 (best)

Gene CHRD, Length 3,492 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRD-204ENST00000420973 MYCNP04198 464 aaPredicted RBP17.58■□□□□ 0.4
CHRD-204ENST00000420973 ATP2B3Q16720 1220 aa17.58■□□□□ 0.4
CHRD-204ENST00000420973 DIP2AQ14689 1571 aa17.58■□□□□ 0.4
CHRD-204ENST00000420973 USP19O94966 1318 aa17.58■□□□□ 0.4
CHRD-204ENST00000420973 HMMRO75330 724 aa17.57■□□□□ 0.4
CHRD-204ENST00000420973 GCC1Q96CN9 775 aa17.57■□□□□ 0.4
CHRD-204ENST00000420973 PRDM11Q9NQV5 511 aa17.57■□□□□ 0.4
CHRD-204ENST00000420973 C9orf78Q9NZ63 289 aaPredicted RBP17.57■□□□□ 0.4
CHRD-204ENST00000420973 SURF6O75683 361 aaKnown RBP17.57■□□□□ 0.4
CHRD-204ENST00000420973 GNAI2P04899 355 aa17.56■□□□□ 0.4
CHRD-204ENST00000420973 FOXD4L5Q5VV16 416 aaPredicted RBP17.56■□□□□ 0.4
CHRD-204ENST00000420973 CEP85Q6P2H3 762 aa17.56■□□□□ 0.4
CHRD-204ENST00000420973 FOXD4L4Q8WXT5 416 aaPredicted RBP17.56■□□□□ 0.4
CHRD-204ENST00000420973 ARHGAP45Q92619 1136 aa17.56■□□□□ 0.4
CHRD-204ENST00000420973 RGPD8O14715 1765 aaPredicted RBP17.56■□□□□ 0.4
CHRD-204ENST00000420973 NUTM1Q86Y26 1132 aa17.56■□□□□ 0.4
CHRD-204ENST00000420973 NPHP4O75161 1426 aaPredicted RBP17.56■□□□□ 0.4
CHRD-204ENST00000420973 ABCC4O15439 1325 aa17.56■□□□□ 0.4
CHRD-204ENST00000420973 CEP170BQ9Y4F5 1589 aaPredicted RBP17.55■□□□□ 0.4
CHRD-204ENST00000420973 TMEM94Q12767 1356 aa17.55■□□□□ 0.4
CHRD-204ENST00000420973 PIK3R4Q99570 1358 aa17.55■□□□□ 0.4
CHRD-204ENST00000420973 MAP3K5Q99683 1374 aa17.55■□□□□ 0.4
CHRD-204ENST00000420973 PTCD1O75127 700 aaKnown RBP17.55■□□□□ 0.4
CHRD-204ENST00000420973 TBC1D9Q6ZT07 1266 aa17.55■□□□□ 0.4
CHRD-204ENST00000420973 TOM1L2Q6ZVM7 507 aa17.55■□□□□ 0.4
CHRD-204ENST00000420973 PNMA6EA0A0J9YXQ4 647 aa17.55■□□□□ 0.4
CHRD-204ENST00000420973 NFATC2IPQ8NCF5 419 aa17.55■□□□□ 0.4
CHRD-204ENST00000420973 CHMP3Q9Y3E7 222 aa17.55■□□□□ 0.4
CHRD-204ENST00000420973 TBC1D32Q96NH3 1257 aa17.54■□□□□ 0.4
CHRD-204ENST00000420973 SIL1Q9H173 461 aa17.54■□□□□ 0.4
CHRD-204ENST00000420973 ADGRB2O60241 1585 aa17.54■□□□□ 0.4
CHRD-204ENST00000420973 KCNG1Q9UIX4 513 aa17.53■□□□□ 0.4
CHRD-204ENST00000420973 SRGAP3O43295 1099 aa17.53■□□□□ 0.4
CHRD-204ENST00000420973 CHRM1P11229 460 aaPredicted RBP17.53■□□□□ 0.4
CHRD-204ENST00000420973 EVA1CP58658 441 aa17.53■□□□□ 0.4
CHRD-204ENST00000420973 CWF19L2Q2TBE0 894 aaKnown RBP17.53■□□□□ 0.4
CHRD-204ENST00000420973 ARHGEF10O15013 1369 aa17.53■□□□□ 0.4
CHRD-204ENST00000420973 PROSER3Q2NL68 480 aa17.53■□□□□ 0.4
CHRD-204ENST00000420973 SYTL4Q96C24 671 aaPredicted RBP17.53■□□□□ 0.4
CHRD-204ENST00000420973 ITSN1Q15811 1721 aa17.52■□□□□ 0.4
CHRD-204ENST00000420973 ERICH4A6NGS2 130 aa17.52■□□□□ 0.4
CHRD-204ENST00000420973 USP31Q70CQ4 1352 aa17.52■□□□□ 0.4
CHRD-204ENST00000420973 SRCIN1Q9C0H9 1055 aa17.52■□□□□ 0.4
CHRD-204ENST00000420973 CCT4P50991 539 aaKnown RBP17.52■□□□□ 0.39
CHRD-204ENST00000420973 SETD1AO15047 1707 aaKnown RBP17.51■□□□□ 0.39
CHRD-204ENST00000420973 TATP17735 454 aaPredicted RBP17.51■□□□□ 0.39
CHRD-204ENST00000420973 PDCL2Q8N4E4 241 aa17.51■□□□□ 0.39
CHRD-204ENST00000420973 ANKRD44Q8N8A2 993 aa17.51■□□□□ 0.39
CHRD-204ENST00000420973 GBP4Q96PP9 640 aa17.51■□□□□ 0.39
CHRD-204ENST00000420973 CCDC66A2RUB6 948 aa17.51■□□□□ 0.39
CHRD-204ENST00000420973 TULP1O00294 542 aaPredicted RBP17.51■□□□□ 0.39
CHRD-204ENST00000420973 INTS3Q68E01 1043 aaKnown RBP17.51■□□□□ 0.39
CHRD-204ENST00000420973 RIC3Q7Z5B4 369 aa17.51■□□□□ 0.39
CHRD-204ENST00000420973 ARHGEF25Q86VW2 580 aa17.51■□□□□ 0.39
CHRD-204ENST00000420973 TTC5Q8N0Z6 440 aa17.51■□□□□ 0.39
CHRD-204ENST00000420973 MPNDQ8N594 471 aa17.51■□□□□ 0.39
CHRD-204ENST00000420973 RNF216Q9NWF9 866 aaPredicted RBP17.51■□□□□ 0.39
CHRD-204ENST00000420973 NBPF7P0C2Y1 421 aaPredicted RBP17.51■□□□□ 0.39
CHRD-204ENST00000420973 FOXD4L6Q3SYB3 417 aaPredicted RBP17.51■□□□□ 0.39
CHRD-204ENST00000420973 FOXD4L3Q6VB84 417 aaPredicted RBP17.51■□□□□ 0.39
CHRD-204ENST00000420973 BCCIPQ9P287 314 aaKnown RBP eCLIP17.5■□□□□ 0.39
CHRD-204ENST00000420973 PTCH1Q13635 1447 aa17.5■□□□□ 0.39
CHRD-204ENST00000420973 PLEKHM2Q8IWE5 1019 aa17.5■□□□□ 0.39
CHRD-204ENST00000420973 FAM193AP78312 1265 aa17.49■□□□□ 0.39
CHRD-204ENST00000420973 PTPRCP08575 1304 aa17.49■□□□□ 0.39
CHRD-204ENST00000420973 DTNBO60941 627 aa17.49■□□□□ 0.39
CHRD-204ENST00000420973 RPAP2Q8IXW5 612 aaPredicted RBP17.49■□□□□ 0.39
CHRD-204ENST00000420973 TIGD1Q96MW7 591 aa17.49■□□□□ 0.39
CHRD-204ENST00000420973 DNAJC5Q9H3Z4 198 aa17.49■□□□□ 0.39
CHRD-204ENST00000420973 DDX49Q9Y6V7 483 aaKnown RBP17.49■□□□□ 0.39
CHRD-204ENST00000420973 GSPT1P15170 499 aaKnown RBP17.49■□□□□ 0.39
CHRD-204ENST00000420973 U2AF2P26368 475 aaKnown RBP eCLIP17.49■□□□□ 0.391e-7■■□□□ 11.8
CHRD-204ENST00000420973 CASC1Q6TDU7 716 aa17.49■□□□□ 0.39
CHRD-204ENST00000420973 MAP3K2Q9Y2U5 619 aa17.49■□□□□ 0.39
CHRD-204ENST00000420973 ARHGAP23Q9P227 1491 aa17.48■□□□□ 0.39
CHRD-204ENST00000420973 CDC45O75419 566 aa17.48■□□□□ 0.39
CHRD-204ENST00000420973 DCTPP1Q9H773 170 aa17.48■□□□□ 0.39
CHRD-204ENST00000420973 GNAI3P08754 354 aa17.48■□□□□ 0.39
CHRD-204ENST00000420973 PPP1R42Q7Z4L9 355 aa17.48■□□□□ 0.39
CHRD-204ENST00000420973 ANO2Q9NQ90 1003 aa17.48■□□□□ 0.39
CHRD-204ENST00000420973 NOL7Q9UMY1 257 aaKnown RBP17.48■□□□□ 0.39
CHRD-204ENST00000420973 PA2G4Q9UQ80 394 aaKnown RBP17.48■□□□□ 0.39
CHRD-204ENST00000420973 GOLGA6L22H0YM25 854 aa17.48■□□□□ 0.39
CHRD-204ENST00000420973 RNMTO43148 476 aaKnown RBP17.48■□□□□ 0.39
CHRD-204ENST00000420973 PPP1R9BQ96SB3 815 aa17.48■□□□□ 0.39
CHRD-204ENST00000420973 ATP5J2-PTCD1G3V325 749 aa17.47■□□□□ 0.39
CHRD-204ENST00000420973 SDSP20132 328 aa17.47■□□□□ 0.39
CHRD-204ENST00000420973 ZNF335Q9H4Z2 1342 aaPredicted RBP17.47■□□□□ 0.39
CHRD-204ENST00000420973 CLGNO14967 610 aa17.47■□□□□ 0.39
CHRD-204ENST00000420973 PTMSP20962 102 aa17.47■□□□□ 0.39
CHRD-204ENST00000420973 CRB1P82279 1406 aa17.46■□□□□ 0.39
CHRD-204ENST00000420973 EIF4A1P60842 406 aaKnown RBP17.46■□□□□ 0.39
CHRD-204ENST00000420973 CADPS2Q86UW7 1296 aa17.46■□□□□ 0.39
CHRD-204ENST00000420973 DNAAF4Q8WXU2 420 aa17.46■□□□□ 0.39
CHRD-204ENST00000420973 CCDC85AQ96PX6 553 aaPredicted RBP17.46■□□□□ 0.39
CHRD-204ENST00000420973 RTL1A6NKG5 1358 aa17.46■□□□□ 0.39
CHRD-204ENST00000420973 AKAP4Q5JQC9 854 aa17.46■□□□□ 0.39
CHRD-204ENST00000420973 LRRCC1Q9C099 1032 aa17.46■□□□□ 0.39
CHRD-204ENST00000420973 SLIT1O75093 1534 aa17.46■□□□□ 0.39
CHRD-204ENST00000420973 ZNF500O60304 480 aaPredicted RBP17.45■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 94.2 ms