RNA–Protein interactions for RNA: ENST00000419387.5

NUP50-205, Transcript of nucleoporin 50, humanhuman

TSL 3

Gene NUP50, Length 1,018 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-205ENST00000419387 PRKAR2BP31323 418 aa12.64□□□□□ -0.39
NUP50-205ENST00000419387 TEFQ10587 303 aa12.64□□□□□ -0.39
NUP50-205ENST00000419387 FKBP8Q14318 412 aa12.64□□□□□ -0.39
NUP50-205ENST00000419387 TTC5Q8N0Z6 440 aa12.64□□□□□ -0.39
NUP50-205ENST00000419387 PHACTR3Q96KR7 559 aa12.64□□□□□ -0.39
NUP50-205ENST00000419387 RSPH6AQ9H0K4 717 aa12.64□□□□□ -0.39
NUP50-205ENST00000419387 ADAMTS7Q9UKP4 1686 aa12.64□□□□□ -0.39
NUP50-205ENST00000419387 SOS1Q07889 1333 aaPredicted RBP12.63□□□□□ -0.39
NUP50-205ENST00000419387 A0A0G2JLW4 131 aa12.63□□□□□ -0.39
NUP50-205ENST00000419387 ZPR1O75312 459 aa12.63□□□□□ -0.39
NUP50-205ENST00000419387 PIP4P2Q8N4L2 257 aa12.63□□□□□ -0.39
NUP50-205ENST00000419387 C10orf71Q711Q0 1435 aa12.62□□□□□ -0.39
NUP50-205ENST00000419387 KCPQ6ZWJ8 1503 aa12.62□□□□□ -0.39
NUP50-205ENST00000419387 PXDNLA1KZ92 1463 aa12.62□□□□□ -0.39
NUP50-205ENST00000419387 U2AF1L5P0DN76 240 aaPredicted RBP12.62□□□□□ -0.39
NUP50-205ENST00000419387 TM4SF1P30408 202 aa12.62□□□□□ -0.39
NUP50-205ENST00000419387 C1QTNF8P60827 252 aa12.62□□□□□ -0.39
NUP50-205ENST00000419387 U2AF1Q01081 240 aaKnown RBP eCLIP12.62□□□□□ -0.39
NUP50-205ENST00000419387 USPL1Q5W0Q7 1092 aa12.62□□□□□ -0.39
NUP50-205ENST00000419387 ZNF790Q6PG37 636 aa12.62□□□□□ -0.39
NUP50-205ENST00000419387 ZBTB1Q9Y2K1 713 aa12.62□□□□□ -0.39
NUP50-205ENST00000419387 VIRMAQ69YN4 1812 aaKnown RBP12.62□□□□□ -0.39
NUP50-205ENST00000419387 C4AP0C0L4 1744 aa12.62□□□□□ -0.39
NUP50-205ENST00000419387 GOLGB1Q14789 3259 aaKnown RBP12.61□□□□□ -0.39
NUP50-205ENST00000419387 GIGYF1O75420 1035 aaPredicted RBP12.61□□□□□ -0.39
NUP50-205ENST00000419387 FCHSD2O94868 740 aa12.61□□□□□ -0.39
NUP50-205ENST00000419387 STARD3NLO95772 234 aa12.61□□□□□ -0.39
NUP50-205ENST00000419387 DPEP1P16444 411 aa12.61□□□□□ -0.39
NUP50-205ENST00000419387 DDR1Q08345 913 aa12.61□□□□□ -0.39
NUP50-205ENST00000419387 TEX13AQ9BXU3 409 aaPredicted RBP12.61□□□□□ -0.39
NUP50-205ENST00000419387 NARFQ9UHQ1 456 aa12.61□□□□□ -0.39
NUP50-205ENST00000419387 BCS1LQ9Y276 419 aa12.61□□□□□ -0.39
NUP50-205ENST00000419387 KIF13BQ9NQT8 1826 aa12.6□□□□□ -0.39
NUP50-205ENST00000419387 CEMIPQ8WUJ3 1361 aa12.6□□□□□ -0.39
NUP50-205ENST00000419387 POLRMTO00411 1230 aaKnown RBP12.6□□□□□ -0.39
NUP50-205ENST00000419387 CANXP27824 592 aaKnown RBP12.6□□□□□ -0.39
NUP50-205ENST00000419387 ZNF496Q96IT1 587 aaPredicted RBP12.6□□□□□ -0.39
NUP50-205ENST00000419387 COL15A1P39059 1388 aa12.59□□□□□ -0.39
NUP50-205ENST00000419387 HEG1Q9ULI3 1381 aa12.59□□□□□ -0.39
NUP50-205ENST00000419387 BTBD11A6QL63 1104 aa12.59□□□□□ -0.39
NUP50-205ENST00000419387 KCNA3P22001 575 aa12.59□□□□□ -0.39
NUP50-205ENST00000419387 RTF1Q92541 710 aaKnown RBP12.59□□□□□ -0.39
NUP50-205ENST00000419387 FMNL2Q96PY5 1086 aa12.59□□□□□ -0.39
NUP50-205ENST00000419387 ATP10DQ9P241 1426 aa12.59□□□□□ -0.39
NUP50-205ENST00000419387 A0A087WZG4 1122 aa12.58□□□□□ -0.4
NUP50-205ENST00000419387 EIF5P55010 431 aaKnown RBP12.58□□□□□ -0.4
NUP50-205ENST00000419387 BCL2L12Q9HB09 334 aa12.58□□□□□ -0.4
NUP50-205ENST00000419387 PIM2Q9P1W9 311 aa12.58□□□□□ -0.4
NUP50-205ENST00000419387 N4BP2Q86UW6 1770 aaPredicted RBP12.58□□□□□ -0.4
NUP50-205ENST00000419387 ADCY9O60503 1353 aa12.57□□□□□ -0.4
NUP50-205ENST00000419387 KIAA1551Q9HCM1 1747 aa12.57□□□□□ -0.4
NUP50-205ENST00000419387 UBR2Q8IWV8 1755 aa12.57□□□□□ -0.4
NUP50-205ENST00000419387 KCNQ3O43525 872 aa12.57□□□□□ -0.4
NUP50-205ENST00000419387 HTATSF1O43719 755 aaKnown RBP12.57□□□□□ -0.4
NUP50-205ENST00000419387 NFIXQ14938 502 aa12.57□□□□□ -0.4
NUP50-205ENST00000419387 ARHGAP27Q6ZUM4 889 aa12.57□□□□□ -0.4
NUP50-205ENST00000419387 GPBP1L1Q9HC44 474 aaPredicted RBP12.57□□□□□ -0.4
NUP50-205ENST00000419387 SERPINB2P05120 415 aa12.56□□□□□ -0.4
NUP50-205ENST00000419387 MCM10Q7L590 875 aa12.56□□□□□ -0.4
NUP50-205ENST00000419387 PITPNM1O00562 1244 aa12.55□□□□□ -0.4
NUP50-205ENST00000419387 A1BGP04217 495 aa12.55□□□□□ -0.4
NUP50-205ENST00000419387 CHRNA5P30532 468 aa12.55□□□□□ -0.4
NUP50-205ENST00000419387 IL6STP40189 918 aaPredicted RBP12.55□□□□□ -0.4
NUP50-205ENST00000419387 DALRD3Q5D0E6 543 aaKnown RBP12.55□□□□□ -0.4
NUP50-205ENST00000419387 ZNF526Q8TF50 670 aaPredicted RBP12.55□□□□□ -0.4
NUP50-205ENST00000419387 SIPA1L3O60292 1781 aaPredicted RBP12.55□□□□□ -0.4
NUP50-205ENST00000419387 SENP3-EIF4A1A0A087X0R7 540 aa12.54□□□□□ -0.4
NUP50-205ENST00000419387 NEFMP07197 916 aa12.54□□□□□ -0.4
NUP50-205ENST00000419387 DCTN1Q14203 1278 aa12.54□□□□□ -0.4
NUP50-205ENST00000419387 NPM2Q86SE8 214 aaKnown RBP12.54□□□□□ -0.4
NUP50-205ENST00000419387 TBC1D2BQ9UPU7 963 aa12.54□□□□□ -0.4
NUP50-205ENST00000419387 ZNF330Q9Y3S2 320 aaPredicted RBP12.54□□□□□ -0.4
NUP50-205ENST00000419387 USP16Q9Y5T5 823 aa12.54□□□□□ -0.4
NUP50-205ENST00000419387 SNRPA1P09661 255 aaKnown RBP12.53□□□□□ -0.4
NUP50-205ENST00000419387 TAF7Q15545 349 aaPredicted RBP12.53□□□□□ -0.4
NUP50-205ENST00000419387 BICDL1Q6ZP65 573 aa12.53□□□□□ -0.4
NUP50-205ENST00000419387 FXR2P51116 673 aaKnown RBP eCLIP12.52□□□□□ -0.41
NUP50-205ENST00000419387 TBC1D9BQ66K14 1250 aa12.52□□□□□ -0.41
NUP50-205ENST00000419387 PLEKHF1Q96S99 279 aa12.52□□□□□ -0.41
NUP50-205ENST00000419387 BRCA1P38398 1863 aaKnown RBP12.51□□□□□ -0.41
NUP50-205ENST00000419387 PRAMEF22A3QJZ6 481 aa12.51□□□□□ -0.41
NUP50-205ENST00000419387 ATXN8OSP0DMR3 200 aa12.51□□□□□ -0.41
NUP50-205ENST00000419387 PNNQ9H307 717 aaKnown RBP12.51□□□□□ -0.41
NUP50-205ENST00000419387 HAX1O00165 279 aa12.5□□□□□ -0.41
NUP50-205ENST00000419387 CAMTA2O94983 1202 aa12.5□□□□□ -0.41
NUP50-205ENST00000419387 RALBP1Q15311 655 aa12.5□□□□□ -0.41
NUP50-205ENST00000419387 C9orf131Q5VYM1 1079 aa12.5□□□□□ -0.41
NUP50-205ENST00000419387 DZIP3Q86Y13 1208 aaKnown RBP12.5□□□□□ -0.41
NUP50-205ENST00000419387 C2CD5Q86YS7 1000 aa12.5□□□□□ -0.41
NUP50-205ENST00000419387 MIS18AQ9NYP9 233 aa12.5□□□□□ -0.41
NUP50-205ENST00000419387 NRXN2Q9P2S2 1712 aa12.5□□□□□ -0.41
NUP50-205ENST00000419387 AFDNP55196 1824 aaKnown RBP12.5□□□□□ -0.41
NUP50-205ENST00000419387 ARFGEF1Q9Y6D6 1849 aa12.49□□□□□ -0.41
NUP50-205ENST00000419387 H0YIN7 160 aa12.49□□□□□ -0.41
NUP50-205ENST00000419387 PIP4K2AP48426 406 aaPredicted RBP12.49□□□□□ -0.41
NUP50-205ENST00000419387 NFE2L2Q16236 605 aa12.49□□□□□ -0.41
NUP50-205ENST00000419387 TTLL6Q8N841 843 aa12.49□□□□□ -0.41
NUP50-205ENST00000419387 PNISRQ8TF01 805 aaKnown RBP12.49□□□□□ -0.41
NUP50-205ENST00000419387 SETDB2Q96T68 719 aa12.49□□□□□ -0.41
NUP50-205ENST00000419387 KIF3CO14782 793 aa12.48□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms