RNA–Protein interactions for RNA: ENST00000417641.6

VRK2-203, Transcript of vaccinia related kinase 2, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene VRK2, Length 2,381 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK2-203ENST00000417641 SGSM2O43147 1006 aa9.43□□□□□ -0.9
VRK2-203ENST00000417641 EIF4A2Q14240 407 aaKnown RBP9.43□□□□□ -0.9
VRK2-203ENST00000417641 WAPLQ7Z5K2 1190 aa9.43□□□□□ -0.9
VRK2-203ENST00000417641 RILPL2Q969X0 211 aa9.43□□□□□ -0.9
VRK2-203ENST00000417641 DIP2CQ9Y2E4 1556 aa9.43□□□□□ -0.9
VRK2-203ENST00000417641 TRIM6-TRIM34B2RNG4 842 aa9.42□□□□□ -0.9
VRK2-203ENST00000417641 ST3GAL1Q11201 340 aa9.42□□□□□ -0.9
VRK2-203ENST00000417641 RASEFQ8IZ41 740 aa9.42□□□□□ -0.9
VRK2-203ENST00000417641 LIMCH1Q9UPQ0 1083 aa9.42□□□□□ -0.9
VRK2-203ENST00000417641 FIBPO43427 364 aa9.42□□□□□ -0.9
VRK2-203ENST00000417641 LARGE1O95461 756 aa9.42□□□□□ -0.9
VRK2-203ENST00000417641 PTGS1P23219 599 aa9.42□□□□□ -0.9
VRK2-203ENST00000417641 RIMBP3CA6NJZ7 1639 aa9.41□□□□□ -0.9
VRK2-203ENST00000417641 RIMBP3BA6NNM3 1639 aa9.41□□□□□ -0.9
VRK2-203ENST00000417641 RIMBP3Q9UFD9 1639 aa9.41□□□□□ -0.9
VRK2-203ENST00000417641 RGPD1P0DJD0 1748 aa9.41□□□□□ -0.9
VRK2-203ENST00000417641 MON2Q7Z3U7 1717 aa9.41□□□□□ -0.9
VRK2-203ENST00000417641 C3P01024 1663 aa9.41□□□□□ -0.9
VRK2-203ENST00000417641 A0A0U1RQG5 324 aaPredicted RBP9.41□□□□□ -0.9
VRK2-203ENST00000417641 DNM1Q05193 864 aaKnown RBP9.41□□□□□ -0.9
VRK2-203ENST00000417641 GABPB1Q06547 395 aaPredicted RBP9.41□□□□□ -0.9
VRK2-203ENST00000417641 CHAF1AQ13111 956 aaPredicted RBP9.41□□□□□ -0.9
VRK2-203ENST00000417641 SULT6B1Q6IMI4 303 aa9.41□□□□□ -0.9
VRK2-203ENST00000417641 PI4K2BQ8TCG2 481 aa9.41□□□□□ -0.9
VRK2-203ENST00000417641 FAM200AQ8TCP9 573 aa9.41□□□□□ -0.9
VRK2-203ENST00000417641 COG3Q96JB2 828 aa9.41□□□□□ -0.9
VRK2-203ENST00000417641 DDX41Q9UJV9 622 aaKnown RBP9.41□□□□□ -0.9
VRK2-203ENST00000417641 ZSCAN21Q9Y5A6 473 aaPredicted RBP9.41□□□□□ -0.9
VRK2-203ENST00000417641 MRVI1Q9Y6F6 885 aa9.41□□□□□ -0.9
VRK2-203ENST00000417641 SETD1AO15047 1707 aaKnown RBP9.41□□□□□ -0.9
VRK2-203ENST00000417641 SMTNL1A8MU46 457 aa9.41□□□□□ -0.9
VRK2-203ENST00000417641 GOLGA6L6A8MZA4 724 aa9.41□□□□□ -0.9
VRK2-203ENST00000417641 GNAI3P08754 354 aa9.41□□□□□ -0.9
VRK2-203ENST00000417641 SLFN14P0C7P3 912 aa9.41□□□□□ -0.9
VRK2-203ENST00000417641 SPC24Q8NBT2 197 aa9.41□□□□□ -0.9
VRK2-203ENST00000417641 KCNB2Q92953 911 aa9.41□□□□□ -0.9
VRK2-203ENST00000417641 HYPKQ9NX55 129 aa9.41□□□□□ -0.9
VRK2-203ENST00000417641 FAM53CQ9NYF3 392 aa9.41□□□□□ -0.9
VRK2-203ENST00000417641 ATP6V1DQ9Y5K8 247 aa9.41□□□□□ -0.9
VRK2-203ENST00000417641 MORC2Q9Y6X9 1032 aaPredicted RBP9.41□□□□□ -0.9
VRK2-203ENST00000417641 XRN1Q8IZH2 1706 aaKnown RBP9.4□□□□□ -0.9
VRK2-203ENST00000417641 WASLO00401 505 aaPredicted RBP9.4□□□□□ -0.9
VRK2-203ENST00000417641 CCDC192P0DO97 292 aa9.4□□□□□ -0.9
VRK2-203ENST00000417641 FGD1P98174 961 aa9.4□□□□□ -0.9
VRK2-203ENST00000417641 SLC4A10Q6U841 1118 aa9.4□□□□□ -0.9
VRK2-203ENST00000417641 RBM43Q6ZSC3 357 aaKnown RBP9.4□□□□□ -0.9
VRK2-203ENST00000417641 SMC3Q9UQE7 1217 aa9.4□□□□□ -0.9
VRK2-203ENST00000417641 CRYBG1Q9Y4K1 1723 aa9.4□□□□□ -0.9
VRK2-203ENST00000417641 PLA2G4DQ86XP0 818 aa9.39□□□□□ -0.91
VRK2-203ENST00000417641 SSH3Q8TE77 659 aa9.39□□□□□ -0.91
VRK2-203ENST00000417641 TAF3Q5VWG9 929 aa9.39□□□□□ -0.91
VRK2-203ENST00000417641 TTC6Q86TZ1 520 aa9.39□□□□□ -0.91
VRK2-203ENST00000417641 MIS18AQ9NYP9 233 aa9.39□□□□□ -0.91
VRK2-203ENST00000417641 ELP1O95163 1332 aa9.39□□□□□ -0.91
VRK2-203ENST00000417641 IGSF3O75054 1194 aa9.38□□□□□ -0.91
VRK2-203ENST00000417641 GJB2P29033 226 aa9.38□□□□□ -0.91
VRK2-203ENST00000417641 TYRO3Q06418 890 aa9.38□□□□□ -0.91
VRK2-203ENST00000417641 LRMPQ12912 555 aa9.38□□□□□ -0.91
VRK2-203ENST00000417641 POLA2Q14181 598 aa9.38□□□□□ -0.91
VRK2-203ENST00000417641 CCDC186Q7Z3E2 898 aa9.38□□□□□ -0.91
VRK2-203ENST00000417641 ARHGAP30Q7Z6I6 1101 aaPredicted RBP9.38□□□□□ -0.91
VRK2-203ENST00000417641 TDRD7Q8NHU6 1098 aaKnown RBP9.38□□□□□ -0.91
VRK2-203ENST00000417641 RTF1Q92541 710 aaKnown RBP9.38□□□□□ -0.91
VRK2-203ENST00000417641 LARP6Q9BRS8 491 aaKnown RBP9.38□□□□□ -0.91
VRK2-203ENST00000417641 SOS1Q07889 1333 aaPredicted RBP9.38□□□□□ -0.91
VRK2-203ENST00000417641 CCDC171Q6TFL3 1326 aa9.38□□□□□ -0.91
VRK2-203ENST00000417641 LIG1P18858 919 aa9.38□□□□□ -0.91
VRK2-203ENST00000417641 ZNF75DP51815 510 aa9.38□□□□□ -0.91
VRK2-203ENST00000417641 PLCB2Q00722 1185 aa9.38□□□□□ -0.91
VRK2-203ENST00000417641 VPS53Q5VIR6 699 aa9.38□□□□□ -0.91
VRK2-203ENST00000417641 ZSCAN25Q6NSZ9 544 aa9.38□□□□□ -0.91
VRK2-203ENST00000417641 LUZP1Q86V48 1076 aa9.38□□□□□ -0.91
VRK2-203ENST00000417641 TM6SF1Q9BZW5 370 aa9.38□□□□□ -0.91
VRK2-203ENST00000417641 USP44Q9H0E7 712 aa9.38□□□□□ -0.91
VRK2-203ENST00000417641 CBX8Q9HC52 389 aa9.38□□□□□ -0.91
VRK2-203ENST00000417641 CGNQ9P2M7 1197 aaKnown RBP9.38□□□□□ -0.91
VRK2-203ENST00000417641 LRRFIP2Q9Y608 721 aaKnown RBP9.38□□□□□ -0.91
VRK2-203ENST00000417641 SPATA31D1Q6ZQQ2 1576 aa9.38□□□□□ -0.91
VRK2-203ENST00000417641 TTC21AQ8NDW8 1320 aa9.38□□□□□ -0.91
VRK2-203ENST00000417641 USP42Q9H9J4 1324 aaKnown RBP9.38□□□□□ -0.91
VRK2-203ENST00000417641 AKAP12Q02952 1782 aa9.37□□□□□ -0.91
VRK2-203ENST00000417641 N4BP2Q86UW6 1770 aaPredicted RBP9.37□□□□□ -0.91
VRK2-203ENST00000417641 PXDNLA1KZ92 1463 aa9.37□□□□□ -0.91
VRK2-203ENST00000417641 RAB11FIP3O75154 756 aa9.37□□□□□ -0.91
VRK2-203ENST00000417641 FLIIQ13045 1269 aa9.37□□□□□ -0.91
VRK2-203ENST00000417641 NAA30Q147X3 362 aaPredicted RBP9.37□□□□□ -0.91
VRK2-203ENST00000417641 NUTM1Q86Y26 1132 aa9.37□□□□□ -0.91
VRK2-203ENST00000417641 CCDC83Q8IWF9 413 aa9.37□□□□□ -0.91
VRK2-203ENST00000417641 KIF18AQ8NI77 898 aa9.37□□□□□ -0.91
VRK2-203ENST00000417641 NUDT16Q96DE0 195 aaKnown RBP9.37□□□□□ -0.91
VRK2-203ENST00000417641 ZSCAN31Q96LW9 406 aaPredicted RBP9.37□□□□□ -0.91
VRK2-203ENST00000417641 ZSWIM6Q9HCJ5 1215 aa9.37□□□□□ -0.91
VRK2-203ENST00000417641 IL1RAPL2Q9NP60 686 aa9.37□□□□□ -0.91
VRK2-203ENST00000417641 TMEM51Q9NW97 253 aa9.37□□□□□ -0.91
VRK2-203ENST00000417641 NRBP1Q9UHY1 535 aa9.37□□□□□ -0.91
VRK2-203ENST00000417641 PAXBP1Q9Y5B6 917 aa9.37□□□□□ -0.91
VRK2-203ENST00000417641 PEAK1Q9H792 1746 aa9.37□□□□□ -0.91
VRK2-203ENST00000417641 NCKAP5LQ9HCH0 1330 aa9.37□□□□□ -0.91
VRK2-203ENST00000417641 TNNT1P13805 278 aa9.37□□□□□ -0.91
VRK2-203ENST00000417641 CPA1P15085 419 aa9.37□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 70 ms