RNA–Protein interactions for RNA: ENST00000416671.5

CHEK2-210, Transcript of checkpoint kinase 2, humanhuman

TSL 1 (best)

Gene CHEK2, Length 2,560 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHEK2-210ENST00000416671 TRPM3Q9HCF6 1732 aaPredicted RBP16.81■□□□□ 0.28
CHEK2-210ENST00000416671 PTMAP06454 111 aaKnown RBP16.81■□□□□ 0.28
CHEK2-210ENST00000416671 CEP85Q6P2H3 762 aa16.81■□□□□ 0.28
CHEK2-210ENST00000416671 ZC3H6P61129 1189 aaKnown RBP16.8■□□□□ 0.28
CHEK2-210ENST00000416671 BRINP3Q76B58 766 aa16.8■□□□□ 0.28
CHEK2-210ENST00000416671 MYRIPQ8NFW9 859 aa16.8■□□□□ 0.28
CHEK2-210ENST00000416671 IP6K1Q92551 441 aa16.8■□□□□ 0.28
CHEK2-210ENST00000416671 MAP3K5Q99683 1374 aa16.8■□□□□ 0.28
CHEK2-210ENST00000416671 DCCP43146 1447 aa16.8■□□□□ 0.28
CHEK2-210ENST00000416671 ATP10DQ9P241 1426 aa16.8■□□□□ 0.28
CHEK2-210ENST00000416671 USP54Q70EL1 1684 aa16.8■□□□□ 0.28
CHEK2-210ENST00000416671 USP26Q9BXU7 913 aa16.8■□□□□ 0.28
CHEK2-210ENST00000416671 RTL1A6NKG5 1358 aa16.8■□□□□ 0.28
CHEK2-210ENST00000416671 SMARCA5O60264 1052 aaPredicted RBP16.79■□□□□ 0.28
CHEK2-210ENST00000416671 ST18O60284 1047 aa16.79■□□□□ 0.28
CHEK2-210ENST00000416671 GSPT1P15170 499 aaKnown RBP16.79■□□□□ 0.28
CHEK2-210ENST00000416671 ANKRD44Q8N8A2 993 aa16.79■□□□□ 0.28
CHEK2-210ENST00000416671 DCTPP1Q9H773 170 aa16.79■□□□□ 0.28
CHEK2-210ENST00000416671 KIF24Q5T7B8 1368 aa16.79■□□□□ 0.28
CHEK2-210ENST00000416671 DNTTIP2Q5QJE6 756 aaKnown RBP16.79■□□□□ 0.28
CHEK2-210ENST00000416671 ZGPATQ8N5A5 531 aaKnown RBP16.79■□□□□ 0.28
CHEK2-210ENST00000416671 OTUD7AQ8TE49 926 aaPredicted RBP16.79■□□□□ 0.28
CHEK2-210ENST00000416671 STK31Q9BXU1 1019 aa16.79■□□□□ 0.28
CHEK2-210ENST00000416671 ZDHHC9Q9Y397 364 aa16.79■□□□□ 0.28
CHEK2-210ENST00000416671 KIF1AQ12756 1690 aa16.78■□□□□ 0.28
CHEK2-210ENST00000416671 MBD3O95983 291 aa16.78■□□□□ 0.28
CHEK2-210ENST00000416671 KCNH5Q8NCM2 988 aa16.78■□□□□ 0.28
CHEK2-210ENST00000416671 RNF214Q8ND24 703 aa16.78■□□□□ 0.28
CHEK2-210ENST00000416671 LGR6Q9HBX8 967 aa16.78■□□□□ 0.28
CHEK2-210ENST00000416671 A0A0U1RQG5 324 aaPredicted RBP16.78■□□□□ 0.28
CHEK2-210ENST00000416671 FKBP5Q13451 457 aaPredicted RBP16.78■□□□□ 0.28
CHEK2-210ENST00000416671 SLAIN2Q9P270 581 aa16.78■□□□□ 0.28
CHEK2-210ENST00000416671 AXIN2Q9Y2T1 843 aa16.78■□□□□ 0.28
CHEK2-210ENST00000416671 HTATSF1O43719 755 aaKnown RBP16.77■□□□□ 0.28
CHEK2-210ENST00000416671 ZSCAN20P17040 1043 aaPredicted RBP16.77■□□□□ 0.28
CHEK2-210ENST00000416671 NSFL1CQ9UNZ2 370 aaKnown RBP16.77■□□□□ 0.28
CHEK2-210ENST00000416671 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP16.77■□□□□ 0.28
CHEK2-210ENST00000416671 FLIIQ13045 1269 aa16.77■□□□□ 0.27
CHEK2-210ENST00000416671 TAF7Q15545 349 aaPredicted RBP16.77■□□□□ 0.27
CHEK2-210ENST00000416671 ARHGEF25Q86VW2 580 aa16.77■□□□□ 0.27
CHEK2-210ENST00000416671 PLEKHM2Q8IWE5 1019 aa16.76■□□□□ 0.27
CHEK2-210ENST00000416671 PRIMPOLQ96LW4 560 aa16.76■□□□□ 0.27
CHEK2-210ENST00000416671 RGPD2P0DJD1 1756 aa16.76■□□□□ 0.27
CHEK2-210ENST00000416671 NPHP3Q7Z494 1330 aa16.76■□□□□ 0.27
CHEK2-210ENST00000416671 RPAP2Q8IXW5 612 aaPredicted RBP16.76■□□□□ 0.27
CHEK2-210ENST00000416671 HMGN5P82970 282 aaKnown RBP16.75■□□□□ 0.27
CHEK2-210ENST00000416671 TTC22Q5TAA0 569 aa16.75■□□□□ 0.27
CHEK2-210ENST00000416671 CCDC30Q5VVM6 783 aa16.75■□□□□ 0.27
CHEK2-210ENST00000416671 TSPY26PQ9H489 355 aa16.75■□□□□ 0.27
CHEK2-210ENST00000416671 LRRC37A3O60309 1634 aa16.74■□□□□ 0.27
CHEK2-210ENST00000416671 MED1Q15648 1581 aaPredicted RBP16.74■□□□□ 0.27
CHEK2-210ENST00000416671 EIF2S2P20042 333 aaKnown RBP16.74■□□□□ 0.27
CHEK2-210ENST00000416671 KCNQ3O43525 872 aa16.74■□□□□ 0.27
CHEK2-210ENST00000416671 PHAXQ9H814 394 aaKnown RBP16.74■□□□□ 0.27
CHEK2-210ENST00000416671 SLIT3O75094 1523 aa16.73■□□□□ 0.27
CHEK2-210ENST00000416671 MPRIPQ6WCQ1 1025 aa16.73■□□□□ 0.27
CHEK2-210ENST00000416671 CHAMP1Q96JM3 812 aa16.73■□□□□ 0.27
CHEK2-210ENST00000416671 ALS2Q96Q42 1657 aa16.73■□□□□ 0.27
CHEK2-210ENST00000416671 PXDNQ92626 1479 aa16.73■□□□□ 0.27
CHEK2-210ENST00000416671 CHRNA2Q15822 529 aa16.73■□□□□ 0.27
CHEK2-210ENST00000416671 GTF2F1P35269 517 aaKnown RBP eCLIP16.72■□□□□ 0.27
CHEK2-210ENST00000416671 CCT4P50991 539 aaKnown RBP16.72■□□□□ 0.27
CHEK2-210ENST00000416671 HDGFL1Q5TGJ6 251 aa16.72■□□□□ 0.27
CHEK2-210ENST00000416671 CASC1Q6TDU7 716 aa16.72■□□□□ 0.27
CHEK2-210ENST00000416671 AEBP2Q6ZN18 517 aaPredicted RBP16.72■□□□□ 0.27
CHEK2-210ENST00000416671 ZNF710Q8N1W2 664 aa16.72■□□□□ 0.27
CHEK2-210ENST00000416671 SYAP1Q96A49 352 aaPredicted RBP16.72■□□□□ 0.27
CHEK2-210ENST00000416671 GTPBP4Q9BZE4 634 aaKnown RBP16.72■□□□□ 0.27
CHEK2-210ENST00000416671 TCHHQ07283 1943 aa16.71■□□□□ 0.27
CHEK2-210ENST00000416671 FOXD4L5Q5VV16 416 aaPredicted RBP16.71■□□□□ 0.27
CHEK2-210ENST00000416671 ZNF530Q6P9A1 599 aaPredicted RBP16.71■□□□□ 0.27
CHEK2-210ENST00000416671 ANKRD24Q8TF21 1146 aa16.71■□□□□ 0.27
CHEK2-210ENST00000416671 FOXD4L4Q8WXT5 416 aaPredicted RBP16.71■□□□□ 0.27
CHEK2-210ENST00000416671 PIBF1Q8WXW3 757 aa16.71■□□□□ 0.27
CHEK2-210ENST00000416671 SPATA31A3Q5VYP0 1347 aa16.71■□□□□ 0.27
CHEK2-210ENST00000416671 JARID2Q92833 1246 aaPredicted RBP16.71■□□□□ 0.26
CHEK2-210ENST00000416671 EXOC6BQ9Y2D4 811 aa16.71■□□□□ 0.26
CHEK2-210ENST00000416671 TNS3Q68CZ2 1445 aa16.7■□□□□ 0.26
CHEK2-210ENST00000416671 CBX1P83916 185 aa16.7■□□□□ 0.26
CHEK2-210ENST00000416671 NOLC1Q14978 699 aaKnown RBP eCLIP16.7■□□□□ 0.26
CHEK2-210ENST00000416671 FAM208AQ9UK61 1670 aaKnown RBP16.7■□□□□ 0.26
CHEK2-210ENST00000416671 ANXA1P04083 346 aa16.7■□□□□ 0.26
CHEK2-210ENST00000416671 TSC1Q92574 1164 aa16.7■□□□□ 0.26
CHEK2-210ENST00000416671 PNMA6EA0A0J9YXQ4 647 aa16.69■□□□□ 0.26
CHEK2-210ENST00000416671 REC8O95072 547 aa16.69■□□□□ 0.26
CHEK2-210ENST00000416671 GNAI2P04899 355 aa16.69■□□□□ 0.26
CHEK2-210ENST00000416671 CEMIPQ8WUJ3 1361 aa16.69■□□□□ 0.26
CHEK2-210ENST00000416671 RGPD5Q99666 1765 aa16.68■□□□□ 0.26
CHEK2-210ENST00000416671 PHF14O94880 888 aa16.68■□□□□ 0.26
CHEK2-210ENST00000416671 TSHZ3Q63HK5 1081 aa16.68■□□□□ 0.26
CHEK2-210ENST00000416671 KIF3AQ9Y496 699 aa16.68■□□□□ 0.26
CHEK2-210ENST00000416671 KIF20AO95235 890 aa16.68■□□□□ 0.26
CHEK2-210ENST00000416671 TEFQ10587 303 aa16.68■□□□□ 0.26
CHEK2-210ENST00000416671 PPP4R3BQ5MIZ7 849 aa16.68■□□□□ 0.26
CHEK2-210ENST00000416671 SDSP20132 328 aa16.67■□□□□ 0.26
CHEK2-210ENST00000416671 EIF4A1P60842 406 aaKnown RBP16.67■□□□□ 0.26
CHEK2-210ENST00000416671 UVSSAQ2YD98 709 aa16.67■□□□□ 0.26
CHEK2-210ENST00000416671 BTBD11A6QL63 1104 aa16.67■□□□□ 0.26
CHEK2-210ENST00000416671 HMMRO75330 724 aa16.67■□□□□ 0.26
CHEK2-210ENST00000416671 FAM184AQ8NB25 1140 aa16.67■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 129.3 ms