RNA–Protein interactions for RNA: ENST00000415294.2

LINC00343-202, long intergenic non-protein coding RNA 343, humanhuman

TSL 5 BASIC

Gene LINC00343, Length 1,320 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00343-202ENST00000415294 H3BRB1 525 aa11.07□□□□□ -0.64
LINC00343-202ENST00000415294 LGR5O75473 907 aa11.07□□□□□ -0.64
LINC00343-202ENST00000415294 ZIC2O95409 532 aaPredicted RBP11.07□□□□□ -0.64
LINC00343-202ENST00000415294 STAU1O95793 577 aaKnown RBP11.07□□□□□ -0.64
LINC00343-202ENST00000415294 TLR1Q15399 786 aa11.07□□□□□ -0.64
LINC00343-202ENST00000415294 POTEAQ6S8J7 498 aa11.07□□□□□ -0.64
LINC00343-202ENST00000415294 ITPKCQ96DU7 683 aa11.07□□□□□ -0.64
LINC00343-202ENST00000415294 C2orf49Q9BVC5 232 aaPredicted RBP11.07□□□□□ -0.64
LINC00343-202ENST00000415294 TUT1Q9H6E5 874 aaKnown RBP11.07□□□□□ -0.64
LINC00343-202ENST00000415294 TOR4AQ9NXH8 423 aa11.07□□□□□ -0.64
LINC00343-202ENST00000415294 SEPT3Q9UH03 358 aa11.07□□□□□ -0.64
LINC00343-202ENST00000415294 MARSP56192 900 aaKnown RBP11.06□□□□□ -0.64
LINC00343-202ENST00000415294 WDR4P57081 412 aaKnown RBP11.06□□□□□ -0.64
LINC00343-202ENST00000415294 NLRP3Q96P20 1036 aa11.06□□□□□ -0.64
LINC00343-202ENST00000415294 RAB6BQ9NRW1 208 aa11.06□□□□□ -0.64
LINC00343-202ENST00000415294 DNMT3AQ9Y6K1 912 aaPredicted RBP11.06□□□□□ -0.64
LINC00343-202ENST00000415294 HIRAP54198 1017 aaPredicted RBP11.05□□□□□ -0.64
LINC00343-202ENST00000415294 ZNF211Q13398 564 aaPredicted RBP11.05□□□□□ -0.64
LINC00343-202ENST00000415294 KDF1Q8NAX2 398 aaPredicted RBP11.05□□□□□ -0.64
LINC00343-202ENST00000415294 PURBQ96QR8 312 aaKnown RBP11.05□□□□□ -0.64
LINC00343-202ENST00000415294 ARAP1Q96P48 1450 aa11.04□□□□□ -0.64
LINC00343-202ENST00000415294 TIMP2P16035 220 aa11.04□□□□□ -0.64
LINC00343-202ENST00000415294 NPR3P17342 541 aa11.04□□□□□ -0.64
LINC00343-202ENST00000415294 C16orf46Q6P387 395 aa11.04□□□□□ -0.64
LINC00343-202ENST00000415294 IQSEC3Q9UPP2 1182 aaPredicted RBP11.04□□□□□ -0.64
LINC00343-202ENST00000415294 J3QL48 77 aa11.03□□□□□ -0.64
LINC00343-202ENST00000415294 ST8SIA5O15466 376 aa11.03□□□□□ -0.64
LINC00343-202ENST00000415294 FAM13AO94988 1023 aa11.03□□□□□ -0.64
LINC00343-202ENST00000415294 GPC1P35052 558 aa11.03□□□□□ -0.64
LINC00343-202ENST00000415294 CBLBQ13191 982 aa11.03□□□□□ -0.64
LINC00343-202ENST00000415294 FOXD4L5Q5VV16 416 aaPredicted RBP11.03□□□□□ -0.64
LINC00343-202ENST00000415294 DNAJC14Q6Y2X3 702 aaPredicted RBP11.03□□□□□ -0.64
LINC00343-202ENST00000415294 CHMP7Q8WUX9 453 aaPredicted RBP11.03□□□□□ -0.64
LINC00343-202ENST00000415294 FOXD4L4Q8WXT5 416 aaPredicted RBP11.03□□□□□ -0.64
LINC00343-202ENST00000415294 FHDC1Q9C0D6 1143 aaPredicted RBP11.03□□□□□ -0.64
LINC00343-202ENST00000415294 SMPD1P17405 629 aa11.02□□□□□ -0.65
LINC00343-202ENST00000415294 GTF2E1P29083 439 aaPredicted RBP11.02□□□□□ -0.65
LINC00343-202ENST00000415294 CENPCQ03188 943 aa11.02□□□□□ -0.65
LINC00343-202ENST00000415294 TEAD4Q15561 434 aa11.02□□□□□ -0.65
LINC00343-202ENST00000415294 MEIOBQ8N635 442 aa11.02□□□□□ -0.65
LINC00343-202ENST00000415294 PPARGC1BQ86YN6 1023 aaKnown RBP11.01□□□□□ -0.65
LINC00343-202ENST00000415294 MYO19Q96H55 970 aa11.01□□□□□ -0.65
LINC00343-202ENST00000415294 ZFAND3Q9H8U3 227 aa11.01□□□□□ -0.65
LINC00343-202ENST00000415294 SERTM1A2A2V5 107 aa11□□□□□ -0.65
LINC00343-202ENST00000415294 CAPN12Q6ZSI9 719 aa11□□□□□ -0.65
LINC00343-202ENST00000415294 TSEN34Q9BSV6 310 aaKnown RBP11□□□□□ -0.65
LINC00343-202ENST00000415294 AAASQ9NRG9 546 aa11□□□□□ -0.65
LINC00343-202ENST00000415294 DCTN4Q9UJW0 460 aa11□□□□□ -0.65
LINC00343-202ENST00000415294 MEN1O00255 615 aa10.99□□□□□ -0.65
LINC00343-202ENST00000415294 NAA30Q147X3 362 aaPredicted RBP10.99□□□□□ -0.65
LINC00343-202ENST00000415294 NIFKQ9BYG3 293 aaKnown RBP10.99□□□□□ -0.65
LINC00343-202ENST00000415294 ANO2Q9NQ90 1003 aa10.99□□□□□ -0.65
LINC00343-202ENST00000415294 ARHGAP4P98171 946 aa10.98□□□□□ -0.65
LINC00343-202ENST00000415294 RELBQ01201 579 aa10.98□□□□□ -0.65
LINC00343-202ENST00000415294 ECM1Q16610 540 aa10.98□□□□□ -0.65
LINC00343-202ENST00000415294 ALKBH2Q6NS38 261 aa10.98□□□□□ -0.65
LINC00343-202ENST00000415294 ZSCAN10Q96SZ4 725 aaPredicted RBP10.98□□□□□ -0.65
LINC00343-202ENST00000415294 RBM47A0AV96 593 aaKnown RBP10.97□□□□□ -0.65
LINC00343-202ENST00000415294 EML1O00423 815 aa10.97□□□□□ -0.65
LINC00343-202ENST00000415294 TBCELQ5QJ74 424 aa10.97□□□□□ -0.65
LINC00343-202ENST00000415294 ZSCAN29Q8IWY8 852 aaPredicted RBP10.97□□□□□ -0.65
LINC00343-202ENST00000415294 ZNF295-AS1Q8N0V1 137 aa10.97□□□□□ -0.65
LINC00343-202ENST00000415294 AGBL1Q96MI9 1066 aa10.97□□□□□ -0.65
LINC00343-202ENST00000415294 BAZ1BQ9UIG0 1483 aaKnown RBP10.96□□□□□ -0.65
LINC00343-202ENST00000415294 POTECB2RU33 542 aa10.96□□□□□ -0.65
LINC00343-202ENST00000415294 UPP2O95045 317 aa10.96□□□□□ -0.65
LINC00343-202ENST00000415294 NOS2P35228 1153 aa10.96□□□□□ -0.65
LINC00343-202ENST00000415294 ABTB2Q8N961 1025 aa10.96□□□□□ -0.65
LINC00343-202ENST00000415294 RHBDD1Q8TEB9 315 aa10.96□□□□□ -0.65
LINC00343-202ENST00000415294 STIM2Q9P246 746 aa10.96□□□□□ -0.65
LINC00343-202ENST00000415294 AVPP01185 164 aa10.95□□□□□ -0.66
LINC00343-202ENST00000415294 RNF144AP50876 292 aaPredicted RBP10.95□□□□□ -0.66
LINC00343-202ENST00000415294 COL19A1Q14993 1142 aa10.95□□□□□ -0.66
LINC00343-202ENST00000415294 RTN1Q16799 776 aa10.95□□□□□ -0.66
LINC00343-202ENST00000415294 GNASQ5JWF2 1037 aa10.95□□□□□ -0.66
LINC00343-202ENST00000415294 COX20Q5RI15 118 aa10.95□□□□□ -0.66
LINC00343-202ENST00000415294 C1orf53Q5VUE5 145 aa10.95□□□□□ -0.66
LINC00343-202ENST00000415294 TMEM214Q6NUQ4 689 aaKnown RBP10.95□□□□□ -0.66
LINC00343-202ENST00000415294 CRIPAKQ8N1N5 446 aa10.95□□□□□ -0.66
LINC00343-202ENST00000415294 ZNF775Q96BV0 537 aaPredicted RBP10.95□□□□□ -0.66
LINC00343-202ENST00000415294 ASB16Q96NS5 453 aa10.95□□□□□ -0.66
LINC00343-202ENST00000415294 CITED4Q96RK1 184 aa10.95□□□□□ -0.66
LINC00343-202ENST00000415294 CABP1Q9NZU7 370 aa10.95□□□□□ -0.66
LINC00343-202ENST00000415294 ZNF232Q9UNY5 417 aa10.95□□□□□ -0.66
LINC00343-202ENST00000415294 AXIN1O15169 862 aa10.94□□□□□ -0.66
LINC00343-202ENST00000415294 MAPK1P28482 360 aa10.94□□□□□ -0.66
LINC00343-202ENST00000415294 RBM25P49756 843 aaKnown RBP10.94□□□□□ -0.66
LINC00343-202ENST00000415294 MTMR3Q13615 1198 aa10.94□□□□□ -0.66
LINC00343-202ENST00000415294 L3MBTL2Q969R5 705 aa10.94□□□□□ -0.66
LINC00343-202ENST00000415294 GRIP2Q9C0E4 1043 aa10.94□□□□□ -0.66
LINC00343-202ENST00000415294 SAP130Q9H0E3 1048 aa10.94□□□□□ -0.66
LINC00343-202ENST00000415294 QTRT2Q9H974 415 aaKnown RBP10.94□□□□□ -0.66
LINC00343-202ENST00000415294 USP3Q9Y6I4 520 aa10.94□□□□□ -0.66
LINC00343-202ENST00000415294 SPINT1O43278 529 aa10.93□□□□□ -0.66
LINC00343-202ENST00000415294 NDUFB5O43674 189 aa10.93□□□□□ -0.66
LINC00343-202ENST00000415294 CTC1Q2NKJ3 1217 aa10.93□□□□□ -0.66
LINC00343-202ENST00000415294 HPS1Q92902 700 aa10.93□□□□□ -0.66
LINC00343-202ENST00000415294 ZNF395Q9H8N7 513 aaPredicted RBP10.93□□□□□ -0.66
LINC00343-202ENST00000415294 ANKRD33BA6NCL7 494 aa10.92□□□□□ -0.66
LINC00343-202ENST00000415294 E9PSI1 815 aa10.92□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms