RNA–Protein interactions for RNA: ENST00000415046.6

PTPRK-209, Transcript of protein tyrosine phosphatase, receptor type K, humanhuman

TSL 5

Gene PTPRK, Length 1,029 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRK-209ENST00000415046 USP17L3A6NCW0 530 aa8.85□□□□□ -0.99
PTPRK-209ENST00000415046 USP17L4A6NCW7 530 aa8.85□□□□□ -0.99
PTPRK-209ENST00000415046 FGFR3P22607 806 aa8.85□□□□□ -0.99
PTPRK-209ENST00000415046 EPHA4P54764 986 aa8.85□□□□□ -0.99
PTPRK-209ENST00000415046 HDGFL1Q5TGJ6 251 aa8.85□□□□□ -0.99
PTPRK-209ENST00000415046 USP17L2Q6R6M4 530 aa8.85□□□□□ -0.99
PTPRK-209ENST00000415046 USP17L1Q7RTZ2 530 aa8.85□□□□□ -0.99
PTPRK-209ENST00000415046 TRIM50Q86XT4 487 aa8.85□□□□□ -0.99
PTPRK-209ENST00000415046 SERBP1Q8NC51 408 aaKnown RBP eCLIP8.85□□□□□ -0.99
PTPRK-209ENST00000415046 NEDD1Q8NHV4 660 aa8.85□□□□□ -0.99
PTPRK-209ENST00000415046 AIDAQ96BJ3 306 aa8.85□□□□□ -0.99
PTPRK-209ENST00000415046 KLRG1Q96E93 195 aa8.85□□□□□ -0.99
PTPRK-209ENST00000415046 SCHIP1Q9P0W5 487 aaPredicted RBP8.85□□□□□ -0.99
PTPRK-209ENST00000415046 GDF2Q9UK05 429 aaPredicted RBP8.85□□□□□ -0.99
PTPRK-209ENST00000415046 DNMT3AQ9Y6K1 912 aaPredicted RBP8.85□□□□□ -0.99
PTPRK-209ENST00000415046 FOXK2Q01167 660 aa8.84□□□□□ -0.99
PTPRK-209ENST00000415046 ZCCHC2Q9C0B9 1178 aaKnown RBP8.84□□□□□ -0.99
PTPRK-209ENST00000415046 CABP1Q9NZU7 370 aa8.84□□□□□ -0.99
PTPRK-209ENST00000415046 PCDHGC4Q9Y5F7 938 aa8.84□□□□□ -0.99
PTPRK-209ENST00000415046 A0A1W2PNR3 127 aa8.83□□□□□ -1
PTPRK-209ENST00000415046 C2CD2LO14523 706 aa8.83□□□□□ -1
PTPRK-209ENST00000415046 ATP9BO43861 1147 aa8.83□□□□□ -1
PTPRK-209ENST00000415046 BMP4P12644 408 aa8.83□□□□□ -1
PTPRK-209ENST00000415046 TATP17735 454 aaPredicted RBP8.83□□□□□ -1
PTPRK-209ENST00000415046 FNBP4Q8N3X1 1017 aaPredicted RBP8.83□□□□□ -1
PTPRK-209ENST00000415046 KIAA1024Q9UPX6 916 aa8.83□□□□□ -1
PTPRK-209ENST00000415046 PHF20L1A8MW92 1017 aa8.82□□□□□ -1
PTPRK-209ENST00000415046 ATP1A2P50993 1020 aa8.82□□□□□ -1
PTPRK-209ENST00000415046 CTBSQ01459 385 aa8.82□□□□□ -1
PTPRK-209ENST00000415046 SLCO4C1Q6ZQN7 724 aa8.82□□□□□ -1
PTPRK-209ENST00000415046 PROSER2Q86WR7 435 aaPredicted RBP8.82□□□□□ -1
PTPRK-209ENST00000415046 GOLGA6L1Q8N7Z2 621 aa8.82□□□□□ -1
PTPRK-209ENST00000415046 ZDHHC1Q8WTX9 485 aa8.82□□□□□ -1
PTPRK-209ENST00000415046 CLUAP1Q96AJ1 413 aa8.82□□□□□ -1
PTPRK-209ENST00000415046 CNTNAP5Q8WYK1 1306 aa8.81□□□□□ -1
PTPRK-209ENST00000415046 SHISA8B8ZZ34 492 aa8.81□□□□□ -1
PTPRK-209ENST00000415046 ATXN7O15265 892 aaPredicted RBP8.81□□□□□ -1
PTPRK-209ENST00000415046 CLDN10P78369 228 aa8.81□□□□□ -1
PTPRK-209ENST00000415046 TEAD4Q15561 434 aa8.81□□□□□ -1
PTPRK-209ENST00000415046 ARSJQ5FYB0 599 aaPredicted RBP8.81□□□□□ -1
PTPRK-209ENST00000415046 C1orf229Q6ZS94 237 aaPredicted RBP8.81□□□□□ -1
PTPRK-209ENST00000415046 PODNQ7Z5L7 613 aa8.81□□□□□ -1
PTPRK-209ENST00000415046 BEND7Q8N7W2 519 aaPredicted RBP8.81□□□□□ -1
PTPRK-209ENST00000415046 TPCN2Q8NHX9 752 aa8.81□□□□□ -1
PTPRK-209ENST00000415046 ZIC5Q96T25 663 aa8.81□□□□□ -1
PTPRK-209ENST00000415046 ZBTB7BO15156 539 aaPredicted RBP8.8□□□□□ -1
PTPRK-209ENST00000415046 SLC9A9Q8IVB4 645 aa8.8□□□□□ -1
PTPRK-209ENST00000415046 HCN2Q9UL51 889 aa8.8□□□□□ -1
PTPRK-209ENST00000415046 PARP3Q9Y6F1 533 aa8.8□□□□□ -1
PTPRK-209ENST00000415046 FAM157BP0CG42 384 aa8.79□□□□□ -1
PTPRK-209ENST00000415046 ARAFP10398 606 aa8.79□□□□□ -1
PTPRK-209ENST00000415046 TXLNAP40222 546 aa8.79□□□□□ -1
PTPRK-209ENST00000415046 TNP2Q05952 138 aa8.79□□□□□ -1
PTPRK-209ENST00000415046 SAMD5Q5TGI4 173 aa8.79□□□□□ -1
PTPRK-209ENST00000415046 TNS4Q8IZW8 715 aa8.79□□□□□ -1
PTPRK-209ENST00000415046 GALNT6Q8NCL4 622 aa8.79□□□□□ -1
PTPRK-209ENST00000415046 GLMNQ92990 594 aa8.79□□□□□ -1
PTPRK-209ENST00000415046 L3MBTL2Q969R5 705 aa8.79□□□□□ -1
PTPRK-209ENST00000415046 DCDC2BA2VCK2 349 aa8.78□□□□□ -1
PTPRK-209ENST00000415046 MAPTP10636 758 aaKnown RBP8.78□□□□□ -1
PTPRK-209ENST00000415046 FAM182BQ5T319 152 aa8.78□□□□□ -1
PTPRK-209ENST00000415046 CCDC102BQ68D86 513 aa8.78□□□□□ -1
PTPRK-209ENST00000415046 LARGE2Q8N3Y3 721 aa8.78□□□□□ -1
PTPRK-209ENST00000415046 EDARADDQ8WWZ3 215 aa8.78□□□□□ -1
PTPRK-209ENST00000415046 GGA1Q9UJY5 639 aa8.78□□□□□ -1
PTPRK-209ENST00000415046 M0R2N6 131 aa8.77□□□□□ -1.01
PTPRK-209ENST00000415046 NOS2P35228 1153 aa8.77□□□□□ -1.01
PTPRK-209ENST00000415046 SNRPNP63162 240 aaKnown RBP8.77□□□□□ -1.01
PTPRK-209ENST00000415046 BICDL1Q6ZP65 573 aa8.77□□□□□ -1.01
PTPRK-209ENST00000415046 SIX5Q8N196 739 aa8.77□□□□□ -1.01
PTPRK-209ENST00000415046 OGFOD1Q8N543 542 aa8.77□□□□□ -1.01
PTPRK-209ENST00000415046 MKRN1Q9UHC7 482 aaKnown RBP8.77□□□□□ -1.01
PTPRK-209ENST00000415046 GPC6Q9Y625 555 aaPredicted RBP8.77□□□□□ -1.01
PTPRK-209ENST00000415046 PALM3A6NDB9 673 aaPredicted RBP8.76□□□□□ -1.01
PTPRK-209ENST00000415046 EML1O00423 815 aa8.76□□□□□ -1.01
PTPRK-209ENST00000415046 TBCELQ5QJ74 424 aa8.76□□□□□ -1.01
PTPRK-209ENST00000415046 GJA3Q9Y6H8 435 aa8.76□□□□□ -1.01
PTPRK-209ENST00000415046 SERTM1A2A2V5 107 aa8.75□□□□□ -1.01
PTPRK-209ENST00000415046 KHNYNO15037 678 aaKnown RBP8.75□□□□□ -1.01
PTPRK-209ENST00000415046 EFSO43281 561 aa8.75□□□□□ -1.01
PTPRK-209ENST00000415046 IGHA1P01876 353 aa8.75□□□□□ -1.01
PTPRK-209ENST00000415046 EPXP11678 715 aa8.75□□□□□ -1.01
PTPRK-209ENST00000415046 CD33P20138 364 aa8.75□□□□□ -1.01
PTPRK-209ENST00000415046 PSMA6P60900 246 aaKnown RBP8.75□□□□□ -1.01
PTPRK-209ENST00000415046 POTEAQ6S8J7 498 aa8.75□□□□□ -1.01
PTPRK-209ENST00000415046 DCAF5Q96JK2 942 aa8.75□□□□□ -1.01
PTPRK-209ENST00000415046 AVENQ9NQS1 362 aaPredicted RBP8.75□□□□□ -1.01
PTPRK-209ENST00000415046 MAFBQ9Y5Q3 323 aaPredicted RBP8.75□□□□□ -1.01
PTPRK-209ENST00000415046 A6NJR5 290 aa8.74□□□□□ -1.01
PTPRK-209ENST00000415046 DKK1O94907 266 aa8.74□□□□□ -1.01
PTPRK-209ENST00000415046 HOXB4P17483 251 aaPredicted RBP8.74□□□□□ -1.01
PTPRK-209ENST00000415046 HIRAP54198 1017 aaPredicted RBP8.74□□□□□ -1.01
PTPRK-209ENST00000415046 LAMC2Q13753 1193 aa8.74□□□□□ -1.01
PTPRK-209ENST00000415046 SH3PXD2AQ5TCZ1 1133 aa8.74□□□□□ -1.01
PTPRK-209ENST00000415046 GPAT2Q6NUI2 795 aa8.74□□□□□ -1.01
PTPRK-209ENST00000415046 C7orf43Q8WVR3 580 aa8.74□□□□□ -1.01
PTPRK-209ENST00000415046 TSPAN10Q9H1Z9 355 aaPredicted RBP8.74□□□□□ -1.01
PTPRK-209ENST00000415046 MKL2Q9ULH7 1088 aa8.74□□□□□ -1.01
PTPRK-209ENST00000415046 ZNF232Q9UNY5 417 aa8.74□□□□□ -1.01
PTPRK-209ENST00000415046 NEURL1BA8MQ27 555 aa8.73□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms