RNA–Protein interactions for RNA: ENST00000411809.6

CLINT1-201, Transcript of clathrin interactor 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CLINT1, Length 3,440 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLINT1-201ENST00000411809 FAM13BQ9NYF5 915 aa15.96■□□□□ 0.15
CLINT1-201ENST00000411809 RBM27Q9P2N5 1060 aaKnown RBP15.96■□□□□ 0.15
CLINT1-201ENST00000411809 POLA2Q14181 598 aa15.96■□□□□ 0.14
CLINT1-201ENST00000411809 AKAP4Q5JQC9 854 aa15.96■□□□□ 0.14
CLINT1-201ENST00000411809 CLEC17AQ6ZS10 378 aa15.96■□□□□ 0.14
CLINT1-201ENST00000411809 CCDC173Q0VFZ6 552 aa15.95■□□□□ 0.14
CLINT1-201ENST00000411809 STAP2Q9UGK3 403 aa15.95■□□□□ 0.14
CLINT1-201ENST00000411809 ADCY9O60503 1353 aa15.95■□□□□ 0.14
CLINT1-201ENST00000411809 GCP02774 474 aa15.95■□□□□ 0.14
CLINT1-201ENST00000411809 ESCO1Q5FWF5 840 aa15.95■□□□□ 0.14
CLINT1-201ENST00000411809 LAMB4A4D0S4 1761 aa15.95■□□□□ 0.14
CLINT1-201ENST00000411809 PDE1AP54750 535 aa15.94■□□□□ 0.14
CLINT1-201ENST00000411809 ZSCAN30Q86W11 494 aa15.94■□□□□ 0.14
CLINT1-201ENST00000411809 PRPF40AO75400 957 aaKnown RBP15.94■□□□□ 0.14
CLINT1-201ENST00000411809 XPCQ01831 940 aaPredicted RBP15.94■□□□□ 0.14
CLINT1-201ENST00000411809 STK31Q9BXU1 1019 aa15.94■□□□□ 0.14
CLINT1-201ENST00000411809 FOXD4L6Q3SYB3 417 aaPredicted RBP15.94■□□□□ 0.14
CLINT1-201ENST00000411809 FOXD4L3Q6VB84 417 aaPredicted RBP15.94■□□□□ 0.14
CLINT1-201ENST00000411809 PAPPAQ13219 1627 aa15.93■□□□□ 0.14
CLINT1-201ENST00000411809 GNAI3P08754 354 aa15.93■□□□□ 0.14
CLINT1-201ENST00000411809 TRHP20396 242 aaPredicted RBP15.93■□□□□ 0.14
CLINT1-201ENST00000411809 SSH3Q8TE77 659 aa15.93■□□□□ 0.14
CLINT1-201ENST00000411809 AXIN2Q9Y2T1 843 aa15.93■□□□□ 0.14
CLINT1-201ENST00000411809 MPNDQ8N594 471 aa15.93■□□□□ 0.14
CLINT1-201ENST00000411809 PHAXQ9H814 394 aaKnown RBP15.93■□□□□ 0.14
CLINT1-201ENST00000411809 UBR2Q8IWV8 1755 aa15.93■□□□□ 0.14
CLINT1-201ENST00000411809 ABCA3Q99758 1704 aa15.93■□□□□ 0.14
CLINT1-201ENST00000411809 SHANK3Q9BYB0 1731 aa15.93■□□□□ 0.14
CLINT1-201ENST00000411809 HMMRO75330 724 aa15.93■□□□□ 0.14
CLINT1-201ENST00000411809 ZGPATQ8N5A5 531 aaKnown RBP15.93■□□□□ 0.14
CLINT1-201ENST00000411809 PSME1Q06323 249 aa15.92■□□□□ 0.14
CLINT1-201ENST00000411809 KLHL40Q2TBA0 621 aa15.92■□□□□ 0.14
CLINT1-201ENST00000411809 RNF214Q8ND24 703 aa15.92■□□□□ 0.14
CLINT1-201ENST00000411809 LRRC59Q96AG4 307 aaKnown RBP15.92■□□□□ 0.14
CLINT1-201ENST00000411809 AOX1Q06278 1338 aa15.92■□□□□ 0.14
CLINT1-201ENST00000411809 NOL8Q76FK4 1167 aaKnown RBP15.92■□□□□ 0.14
CLINT1-201ENST00000411809 KCNQ3O43525 872 aa15.91■□□□□ 0.14
CLINT1-201ENST00000411809 BEND3Q5T5X7 828 aa15.91■□□□□ 0.14
CLINT1-201ENST00000411809 LTV1Q96GA3 475 aaPredicted RBP15.91■□□□□ 0.14
CLINT1-201ENST00000411809 RBSNQ9H1K0 784 aa15.91■□□□□ 0.14
CLINT1-201ENST00000411809 ZSCAN23Q3MJ62 389 aa15.91■□□□□ 0.14
CLINT1-201ENST00000411809 KDM6AO15550 1401 aaPredicted RBP15.91■□□□□ 0.14
CLINT1-201ENST00000411809 TPM2P07951 284 aa15.91■□□□□ 0.14
CLINT1-201ENST00000411809 PRIM1P49642 420 aaKnown RBP15.91■□□□□ 0.14
CLINT1-201ENST00000411809 FKBP5Q13451 457 aaPredicted RBP15.91■□□□□ 0.14
CLINT1-201ENST00000411809 RNMTO43148 476 aaKnown RBP15.9■□□□□ 0.14
CLINT1-201ENST00000411809 AMOTQ4VCS5 1084 aa15.9■□□□□ 0.14
CLINT1-201ENST00000411809 SLC4A10Q6U841 1118 aa15.9■□□□□ 0.14
CLINT1-201ENST00000411809 HDGFL1Q5TGJ6 251 aa15.89■□□□□ 0.13
CLINT1-201ENST00000411809 CYP2E1P05181 493 aaPredicted RBP15.89■□□□□ 0.13
CLINT1-201ENST00000411809 LRRFIP2Q9Y608 721 aaKnown RBP15.89■□□□□ 0.13
CLINT1-201ENST00000411809 ERBB3P21860 1342 aa15.89■□□□□ 0.13
CLINT1-201ENST00000411809 RABEP1Q15276 862 aa15.88■□□□□ 0.13
CLINT1-201ENST00000411809 ARFGEF2Q9Y6D5 1785 aa15.88■□□□□ 0.13
CLINT1-201ENST00000411809 USP42Q9H9J4 1324 aaKnown RBP15.88■□□□□ 0.13
CLINT1-201ENST00000411809 PTMSP20962 102 aa15.88■□□□□ 0.13
CLINT1-201ENST00000411809 PPP1R9BQ96SB3 815 aa15.88■□□□□ 0.13
CLINT1-201ENST00000411809 MEGF6O75095 1541 aa15.88■□□□□ 0.13
CLINT1-201ENST00000411809 MTX1Q13505 466 aa15.88■□□□□ 0.13
CLINT1-201ENST00000411809 LRRCC1Q9C099 1032 aa15.88■□□□□ 0.13
CLINT1-201ENST00000411809 EXOC6BQ9Y2D4 811 aa15.88■□□□□ 0.13
CLINT1-201ENST00000411809 NUP188Q5SRE5 1749 aa15.88■□□□□ 0.13
CLINT1-201ENST00000411809 ANKRD24Q8TF21 1146 aa15.87■□□□□ 0.13
CLINT1-201ENST00000411809 CHPF2Q9P2E5 772 aa15.87■□□□□ 0.13
CLINT1-201ENST00000411809 SYCE3A1L190 88 aa15.87■□□□□ 0.13
CLINT1-201ENST00000411809 LMBRD1Q9NUN5 540 aa15.87■□□□□ 0.13
CLINT1-201ENST00000411809 UTYO14607 1347 aa15.87■□□□□ 0.13
CLINT1-201ENST00000411809 OFD1O75665 1012 aa15.87■□□□□ 0.13
CLINT1-201ENST00000411809 PLEKHO1Q53GL0 409 aaPredicted RBP15.87■□□□□ 0.13
CLINT1-201ENST00000411809 STRCQ7RTU9 1775 aa15.86■□□□□ 0.13
CLINT1-201ENST00000411809 GIGYF1O75420 1035 aaPredicted RBP15.86■□□□□ 0.13
CLINT1-201ENST00000411809 NECTIN2Q92692 538 aa15.86■□□□□ 0.13
CLINT1-201ENST00000411809 PDCL3Q9H2J4 239 aa15.86■□□□□ 0.13
CLINT1-201ENST00000411809 MX1P20591 662 aa15.85■□□□□ 0.13
CLINT1-201ENST00000411809 C19orf44Q9H6X5 657 aa15.85■□□□□ 0.13
CLINT1-201ENST00000411809 NSFL1CQ9UNZ2 370 aaKnown RBP15.85■□□□□ 0.13
CLINT1-201ENST00000411809 PDIA6Q15084 440 aa15.85■□□□□ 0.13
CLINT1-201ENST00000411809 KRT28Q7Z3Y7 464 aa15.85■□□□□ 0.13
CLINT1-201ENST00000411809 ZNF530Q6P9A1 599 aaPredicted RBP15.85■□□□□ 0.13
CLINT1-201ENST00000411809 PDZRN4Q6ZMN7 1036 aaPredicted RBP15.85■□□□□ 0.13
CLINT1-201ENST00000411809 PI4K2BQ8TCG2 481 aa15.85■□□□□ 0.13
CLINT1-201ENST00000411809 ERC2O15083 957 aa15.84■□□□□ 0.13
CLINT1-201ENST00000411809 NUCB2P80303 420 aa15.84■□□□□ 0.13
CLINT1-201ENST00000411809 BTBD11A6QL63 1104 aa15.84■□□□□ 0.13
CLINT1-201ENST00000411809 NBPF7P0C2Y1 421 aaPredicted RBP15.84■□□□□ 0.13
CLINT1-201ENST00000411809 GPT2Q8TD30 523 aa15.84■□□□□ 0.13
CLINT1-201ENST00000411809 AFDNP55196 1824 aaKnown RBP15.84■□□□□ 0.13
CLINT1-201ENST00000411809 EPB41L2O43491 1005 aaKnown RBP15.84■□□□□ 0.13
CLINT1-201ENST00000411809 TSHZ3Q63HK5 1081 aa15.84■□□□□ 0.13
CLINT1-201ENST00000411809 MPRIPQ6WCQ1 1025 aa15.84■□□□□ 0.13
CLINT1-201ENST00000411809 ESYT1Q9BSJ8 1104 aa15.84■□□□□ 0.13
CLINT1-201ENST00000411809 SRCIN1Q9C0H9 1055 aa15.84■□□□□ 0.13
CLINT1-201ENST00000411809 TNS3Q68CZ2 1445 aa15.83■□□□□ 0.13
CLINT1-201ENST00000411809 RAB11FIP3O75154 756 aa15.83■□□□□ 0.13
CLINT1-201ENST00000411809 LRP10Q7Z4F1 713 aa15.83■□□□□ 0.13
CLINT1-201ENST00000411809 TJP1Q07157 1748 aa15.83■□□□□ 0.12
CLINT1-201ENST00000411809 CHMLP26374 656 aa15.83■□□□□ 0.12
CLINT1-201ENST00000411809 DNAAF4Q8WXU2 420 aa15.83■□□□□ 0.12
CLINT1-201ENST00000411809 CPDO75976 1380 aa15.83■□□□□ 0.12
CLINT1-201ENST00000411809 UQCRHLA0A096LP55 91 aa15.82■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms