RNA–Protein interactions for RNA: ENST00000409739.2

TRAF3IP1-203, Transcript of TRAF3 interacting protein 1, humanhuman

TSL 3

Gene TRAF3IP1, Length 1,070 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF3IP1-203ENST00000409739 POLD1P28340 1107 aa40.97■■■■■ 4.15
TRAF3IP1-203ENST00000409739 ARHGEF1Q92888 912 aaKnown RBP40.97■■■■■ 4.15
TRAF3IP1-203ENST00000409739 TRIM35Q9UPQ4 493 aa40.97■■■■■ 4.15
TRAF3IP1-203ENST00000409739 TEX13AQ9BXU3 409 aaPredicted RBP40.96■■■■■ 4.15
TRAF3IP1-203ENST00000409739 ZBTB1Q9Y2K1 713 aa40.96■■■■■ 4.15
TRAF3IP1-203ENST00000409739 SOS1Q07889 1333 aaPredicted RBP40.95■■■■■ 4.15
TRAF3IP1-203ENST00000409739 STARD3NLO95772 234 aa40.95■■■■■ 4.15
TRAF3IP1-203ENST00000409739 ARXQ96QS3 562 aa40.95■■■■■ 4.15
TRAF3IP1-203ENST00000409739 APAF1O14727 1248 aa40.94■■■■■ 4.14
TRAF3IP1-203ENST00000409739 RFC4P35249 363 aa40.91■■■■■ 4.14
TRAF3IP1-203ENST00000409739 PRAMEF22A3QJZ6 481 aa40.9■■■■■ 4.14
TRAF3IP1-203ENST00000409739 COL15A1P39059 1388 aa40.89■■■■■ 4.14
TRAF3IP1-203ENST00000409739 SNRPA1P09661 255 aaKnown RBP40.89■■■■■ 4.14
TRAF3IP1-203ENST00000409739 TSPYL4Q9UJ04 414 aa40.87■■■■■ 4.13
TRAF3IP1-203ENST00000409739 CANXP27824 592 aaKnown RBP40.86■■■■■ 4.13
TRAF3IP1-203ENST00000409739 FHDC1Q9C0D6 1143 aaPredicted RBP40.86■■■■■ 4.13
TRAF3IP1-203ENST00000409739 USP16Q9Y5T5 823 aa40.86■■■■■ 4.13
TRAF3IP1-203ENST00000409739 USP42Q9H9J4 1324 aaKnown RBP40.86■■■■■ 4.13
TRAF3IP1-203ENST00000409739 EIF4A1P60842 406 aaKnown RBP40.85■■■■■ 4.13
TRAF3IP1-203ENST00000409739 SCN7AQ01118 1682 aa40.85■■■■■ 4.13
TRAF3IP1-203ENST00000409739 GYS1P13807 737 aa40.84■■■■■ 4.13
TRAF3IP1-203ENST00000409739 BABAM1Q9NWV8 329 aa40.84■■■■■ 4.13
TRAF3IP1-203ENST00000409739 SRP68Q9UHB9 627 aaKnown RBP40.83■■■■■ 4.13
TRAF3IP1-203ENST00000409739 A1BGP04217 495 aa40.82■■■■■ 4.13
TRAF3IP1-203ENST00000409739 EIF5P55010 431 aaKnown RBP40.81■■■■■ 4.12
TRAF3IP1-203ENST00000409739 BCORQ6W2J9 1755 aa40.81■■■■■ 4.12
TRAF3IP1-203ENST00000409739 GIGYF1O75420 1035 aaPredicted RBP40.79■■■■■ 4.12
TRAF3IP1-203ENST00000409739 NLGN1Q8N2Q7 840 aa40.78■■■■■ 4.12
TRAF3IP1-203ENST00000409739 SYT17Q9BSW7 474 aa40.78■■■■■ 4.12
TRAF3IP1-203ENST00000409739 IL6STP40189 918 aaPredicted RBP40.77■■■■■ 4.12
TRAF3IP1-203ENST00000409739 CHL1O00533 1208 aa40.75■■■■■ 4.11
TRAF3IP1-203ENST00000409739 MMP10P09238 476 aa40.75■■■■■ 4.11
TRAF3IP1-203ENST00000409739 KLHL34Q8N239 644 aa40.75■■■■■ 4.11
TRAF3IP1-203ENST00000409739 NARFQ9UHQ1 456 aa40.75■■■■■ 4.11
TRAF3IP1-203ENST00000409739 KIF13BQ9NQT8 1826 aa40.74■■■■■ 4.11
TRAF3IP1-203ENST00000409739 ZPR1O75312 459 aa40.74■■■■■ 4.11
TRAF3IP1-203ENST00000409739 PIP4K2AP48426 406 aaPredicted RBP40.74■■■■■ 4.11
TRAF3IP1-203ENST00000409739 LAS1LQ9Y4W2 734 aaKnown RBP40.74■■■■■ 4.11
TRAF3IP1-203ENST00000409739 FKBP8Q14318 412 aa40.73■■■■■ 4.11
TRAF3IP1-203ENST00000409739 USPL1Q5W0Q7 1092 aa40.73■■■■■ 4.11
TRAF3IP1-203ENST00000409739 FAM9BQ8IZU0 186 aa40.73■■■■■ 4.11
TRAF3IP1-203ENST00000409739 ZNF330Q9Y3S2 320 aaPredicted RBP40.73■■■■■ 4.11
TRAF3IP1-203ENST00000409739 SENP3-EIF4A1A0A087X0R7 540 aa40.72■■■■■ 4.11
TRAF3IP1-203ENST00000409739 A0A087WZG4 1122 aa40.71■■■■■ 4.11
TRAF3IP1-203ENST00000409739 AFDNP55196 1824 aaKnown RBP40.7■■■■■ 4.11
TRAF3IP1-203ENST00000409739 CFAP44Q96MT7 982 aa40.7■■■■■ 4.11
TRAF3IP1-203ENST00000409739 NBPF26B4DH59 902 aa40.69■■■■■ 4.1
TRAF3IP1-203ENST00000409739 NBPF10Q6P3W6 841 aaKnown RBP40.69■■■■■ 4.1
TRAF3IP1-203ENST00000409739 NBPF15Q8N660 670 aa40.69■■■■■ 4.1
TRAF3IP1-203ENST00000409739 CALD1Q05682 793 aaKnown RBP40.67■■■■■ 4.1
TRAF3IP1-203ENST00000409739 BCL2L12Q9HB09 334 aa40.67■■■■■ 4.1
TRAF3IP1-203ENST00000409739 ZNF853P0CG23 659 aa40.66■■■■■ 4.1
TRAF3IP1-203ENST00000409739 CCDC27Q2M243 656 aa40.66■■■■■ 4.1
TRAF3IP1-203ENST00000409739 IFT57Q9NWB7 429 aa40.65■■■■■ 4.1
TRAF3IP1-203ENST00000409739 TBC1D2BQ9UPU7 963 aa40.65■■■■■ 4.1
TRAF3IP1-203ENST00000409739 NPM2Q86SE8 214 aaKnown RBP40.64■■■■■ 4.1
TRAF3IP1-203ENST00000409739 NLGN2Q8NFZ4 835 aa40.64■■■■■ 4.1
TRAF3IP1-203ENST00000409739 MBIPQ9NS73 344 aa40.64■■■■■ 4.1
TRAF3IP1-203ENST00000409739 KIAA1551Q9HCM1 1747 aa40.64■■■■■ 4.1
TRAF3IP1-203ENST00000409739 NRXN2Q9P2S2 1712 aa40.64■■■■■ 4.1
TRAF3IP1-203ENST00000409739 KRT24Q2M2I5 525 aa40.63■■■■■ 4.09
TRAF3IP1-203ENST00000409739 CD2APQ9Y5K6 639 aa40.63■■■■■ 4.09
TRAF3IP1-203ENST00000409739 DDR1Q08345 913 aa40.62■■■■■ 4.09
TRAF3IP1-203ENST00000409739 NCBP3Q53F19 620 aaKnown RBP40.62■■■■■ 4.09
TRAF3IP1-203ENST00000409739 PARP3Q9Y6F1 533 aa40.62■■■■■ 4.09
TRAF3IP1-203ENST00000409739 GNAI1P63096 354 aa40.61■■■■■ 4.09
TRAF3IP1-203ENST00000409739 WWC1Q8IX03 1113 aa40.61■■■■■ 4.09
TRAF3IP1-203ENST00000409739 C10orf71Q711Q0 1435 aa40.6■■■■■ 4.09
TRAF3IP1-203ENST00000409739 TM4SF1P30408 202 aa40.6■■■■■ 4.09
TRAF3IP1-203ENST00000409739 DZIP3Q86Y13 1208 aaKnown RBP40.6■■■■■ 4.09
TRAF3IP1-203ENST00000409739 CAMTA2O94983 1202 aa40.59■■■■■ 4.09
TRAF3IP1-203ENST00000409739 N4BP2Q86UW6 1770 aaPredicted RBP40.58■■■■■ 4.09
TRAF3IP1-203ENST00000409739 CCER2I3L3R5 266 aa40.58■■■■■ 4.09
TRAF3IP1-203ENST00000409739 DIEXFQ68CQ4 756 aaKnown RBP40.58■■■■■ 4.09
TRAF3IP1-203ENST00000409739 ERBB4Q15303 1308 aa40.58■■■■■ 4.09
TRAF3IP1-203ENST00000409739 NUP98P52948 1817 aa40.58■■■■■ 4.09
TRAF3IP1-203ENST00000409739 NFIXQ14938 502 aa40.57■■■■■ 4.09
TRAF3IP1-203ENST00000409739 POLRMTO00411 1230 aaKnown RBP40.56■■■■■ 4.08
TRAF3IP1-203ENST00000409739 EIF2S2P20042 333 aaKnown RBP40.55■■■■■ 4.08
TRAF3IP1-203ENST00000409739 SALL2Q9Y467 1007 aaPredicted RBP40.53■■■■■ 4.08
TRAF3IP1-203ENST00000409739 GOLGB1Q14789 3259 aaKnown RBP40.52■■■■■ 4.08
TRAF3IP1-203ENST00000409739 HOXB7P09629 217 aa40.51■■■■■ 4.08
TRAF3IP1-203ENST00000409739 MYL6BP14649 208 aa40.51■■■■■ 4.08
TRAF3IP1-203ENST00000409739 TBC1D9BQ66K14 1250 aa40.51■■■■■ 4.08
TRAF3IP1-203ENST00000409739 BRCA1P38398 1863 aaKnown RBP40.51■■■■■ 4.08
TRAF3IP1-203ENST00000409739 BICDL1Q6ZP65 573 aa40.49■■■■■ 4.07
TRAF3IP1-203ENST00000409739 NGEFQ8N5V2 710 aa40.49■■■■■ 4.07
TRAF3IP1-203ENST00000409739 NECTIN2Q92692 538 aa40.49■■■■■ 4.07
TRAF3IP1-203ENST00000409739 IL16Q14005 1332 aa40.48■■■■■ 4.07
TRAF3IP1-203ENST00000409739 PXDNLA1KZ92 1463 aa40.48■■■■■ 4.07
TRAF3IP1-203ENST00000409739 PDIA6Q15084 440 aa40.48■■■■■ 4.07
TRAF3IP1-203ENST00000409739 DUSP27Q5VZP5 1158 aa40.48■■■■■ 4.07
TRAF3IP1-203ENST00000409739 PROSER3Q2NL68 480 aa40.47■■■■■ 4.07
TRAF3IP1-203ENST00000409739 LRP10Q7Z4F1 713 aa40.47■■■■■ 4.07
TRAF3IP1-203ENST00000409739 ANKRD31Q8N7Z5 1873 aa40.45■■■■■ 4.07
TRAF3IP1-203ENST00000409739 DCAF8L1A6NGE4 600 aa40.45■■■■■ 4.07
TRAF3IP1-203ENST00000409739 TSR2Q969E8 191 aaKnown RBP40.45■■■■■ 4.07
TRAF3IP1-203ENST00000409739 CARMIL3Q8ND23 1372 aa40.45■■■■■ 4.07
TRAF3IP1-203ENST00000409739 RGL2O15211 777 aa40.44■■■■■ 4.06
TRAF3IP1-203ENST00000409739 ANXA1P04083 346 aa40.44■■■■■ 4.06
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms