RNA–Protein interactions for RNA: ENST00000409570.3

SCRN1-203, Transcript of secernin 1, humanhuman

TSL 4 BASIC

Gene SCRN1, Length 535 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCRN1-203ENST00000409570 ZPR1O75312 459 aa23.12■■□□□ 1.29
SCRN1-203ENST00000409570 SLC52A2Q9HAB3 445 aa23.12■■□□□ 1.29
SCRN1-203ENST00000409570 MRC1P22897 1456 aa23.11■■□□□ 1.29
SCRN1-203ENST00000409570 HSPA5P11021 654 aaKnown RBP23.11■■□□□ 1.29
SCRN1-203ENST00000409570 RASSF7Q02833 373 aa23.11■■□□□ 1.29
SCRN1-203ENST00000409570 AKAP4Q5JQC9 854 aa23.11■■□□□ 1.29
SCRN1-203ENST00000409570 LGR6Q9HBX8 967 aa23.11■■□□□ 1.29
SCRN1-203ENST00000409570 TIAM2Q8IVF5 1701 aa23.11■■□□□ 1.29
SCRN1-203ENST00000409570 CYP19A1P11511 503 aaPredicted RBP23.1■■□□□ 1.29
SCRN1-203ENST00000409570 NFIXQ14938 502 aa23.1■■□□□ 1.29
SCRN1-203ENST00000409570 EIF4G2P78344 907 aaKnown RBP eCLIP23.09■■□□□ 1.29
SCRN1-203ENST00000409570 NARFQ9UHQ1 456 aa23.09■■□□□ 1.29
SCRN1-203ENST00000409570 UBR2Q8IWV8 1755 aa23.09■■□□□ 1.29
SCRN1-203ENST00000409570 ZC3H4Q9UPT8 1303 aaKnown RBP23.08■■□□□ 1.29
SCRN1-203ENST00000409570 PRELPP51888 382 aa23.08■■□□□ 1.29
SCRN1-203ENST00000409570 SLC39A6Q13433 755 aa23.08■■□□□ 1.29
SCRN1-203ENST00000409570 COL13A1Q5TAT6 717 aaPredicted RBP23.08■■□□□ 1.29
SCRN1-203ENST00000409570 COL15A1P39059 1388 aa23.08■■□□□ 1.29
SCRN1-203ENST00000409570 RNMTO43148 476 aaKnown RBP23.07■■□□□ 1.28
SCRN1-203ENST00000409570 SMC1BQ8NDV3 1235 aa23.07■■□□□ 1.28
SCRN1-203ENST00000409570 BCL2L12Q9HB09 334 aa23.07■■□□□ 1.28
SCRN1-203ENST00000409570 ZBTB1Q9Y2K1 713 aa23.07■■□□□ 1.28
SCRN1-203ENST00000409570 ANKRD31Q8N7Z5 1873 aa23.06■■□□□ 1.28
SCRN1-203ENST00000409570 DICER1Q9UPY3 1922 aaKnown RBP23.06■■□□□ 1.28
SCRN1-203ENST00000409570 CLSPNQ9HAW4 1339 aa23.06■■□□□ 1.28
SCRN1-203ENST00000409570 LMNB1P20700 586 aa23.05■■□□□ 1.28
SCRN1-203ENST00000409570 SERPINB2P05120 415 aa23.04■■□□□ 1.28
SCRN1-203ENST00000409570 GLTPD2A6NH11 291 aa23.03■■□□□ 1.28
SCRN1-203ENST00000409570 KNSTRNQ9Y448 316 aa23.03■■□□□ 1.28
SCRN1-203ENST00000409570 CARMIL3Q8ND23 1372 aa23.02■■□□□ 1.28
SCRN1-203ENST00000409570 TTLL6Q8N841 843 aa23.02■■□□□ 1.28
SCRN1-203ENST00000409570 FER1L6Q2WGJ9 1857 aa23.02■■□□□ 1.28
SCRN1-203ENST00000409570 HMOX1P09601 288 aa23.01■■□□□ 1.27
SCRN1-203ENST00000409570 VEGFAP15692 232 aaPredicted RBP23.01■■□□□ 1.27
SCRN1-203ENST00000409570 C2CD5Q86YS7 1000 aa23.01■■□□□ 1.27
SCRN1-203ENST00000409570 VSIG10Q8N0Z9 540 aa23.01■■□□□ 1.27
SCRN1-203ENST00000409570 NFKBIEO00221 500 aa23■■□□□ 1.27
SCRN1-203ENST00000409570 AMER1Q5JTC6 1135 aaPredicted RBP23■■□□□ 1.27
SCRN1-203ENST00000409570 COL11A2P13942 1736 aaPredicted RBP22.99■■□□□ 1.27
SCRN1-203ENST00000409570 MTHFSDQ2M296 383 aaKnown RBP22.99■■□□□ 1.27
SCRN1-203ENST00000409570 SCN7AQ01118 1682 aa22.98■■□□□ 1.27
SCRN1-203ENST00000409570 H0YIN7 160 aa22.98■■□□□ 1.27
SCRN1-203ENST00000409570 CANXP27824 592 aaKnown RBP22.98■■□□□ 1.27
SCRN1-203ENST00000409570 CACNA1SQ13698 1873 aa22.98■■□□□ 1.27
SCRN1-203ENST00000409570 SIPA1L3O60292 1781 aaPredicted RBP22.97■■□□□ 1.27
SCRN1-203ENST00000409570 EIF5P55010 431 aaKnown RBP22.97■■□□□ 1.27
SCRN1-203ENST00000409570 POTECB2RU33 542 aa22.96■■□□□ 1.27
SCRN1-203ENST00000409570 BICDL1Q6ZP65 573 aa22.96■■□□□ 1.27
SCRN1-203ENST00000409570 PCGF6Q9BYE7 350 aa22.96■■□□□ 1.27
SCRN1-203ENST00000409570 TNS4Q8IZW8 715 aa22.95■■□□□ 1.26
SCRN1-203ENST00000409570 CAPN15O75808 1086 aa22.93■■□□□ 1.26
SCRN1-203ENST00000409570 TBC1D9BQ66K14 1250 aa22.93■■□□□ 1.26
SCRN1-203ENST00000409570 SLX4Q8IY92 1834 aa22.93■■□□□ 1.26
SCRN1-203ENST00000409570 ARFGEF2Q9Y6D5 1785 aa22.92■■□□□ 1.26
SCRN1-203ENST00000409570 A0A087WZG4 1122 aa22.92■■□□□ 1.26
SCRN1-203ENST00000409570 STARD3NLO95772 234 aa22.92■■□□□ 1.26
SCRN1-203ENST00000409570 HSPA1AP0DMV8 641 aaKnown RBP22.92■■□□□ 1.26
SCRN1-203ENST00000409570 HSPA1BP0DMV9 641 aaKnown RBP22.92■■□□□ 1.26
SCRN1-203ENST00000409570 DIAPH1O60610 1272 aaKnown RBP22.91■■□□□ 1.26
SCRN1-203ENST00000409570 TTC5Q8N0Z6 440 aa22.91■■□□□ 1.26
SCRN1-203ENST00000409570 ZNF622Q969S3 477 aaKnown RBP eCLIP22.91■■□□□ 1.26
SCRN1-203ENST00000409570 PRR5LQ6MZQ0 368 aa22.9■■□□□ 1.26
SCRN1-203ENST00000409570 ZNF496Q96IT1 587 aaPredicted RBP22.9■■□□□ 1.26
SCRN1-203ENST00000409570 BRIP1Q9BX63 1249 aa22.9■■□□□ 1.26
SCRN1-203ENST00000409570 PDZRN3Q9UPQ7 1066 aa22.9■■□□□ 1.26
SCRN1-203ENST00000409570 HEG1Q9ULI3 1381 aa22.89■■□□□ 1.26
SCRN1-203ENST00000409570 BCORQ6W2J9 1755 aa22.89■■□□□ 1.26
SCRN1-203ENST00000409570 C21orf2O43822 256 aa22.89■■□□□ 1.25
SCRN1-203ENST00000409570 DPY19L2Q6NUT2 758 aa22.89■■□□□ 1.25
SCRN1-203ENST00000409570 CCDC24Q8N4L8 307 aa22.89■■□□□ 1.25
SCRN1-203ENST00000409570 ZNF219Q9P2Y4 722 aaPredicted RBP22.89■■□□□ 1.25
SCRN1-203ENST00000409570 PDE6BP35913 854 aa22.88■■□□□ 1.25
SCRN1-203ENST00000409570 ERFEQ4G0M1 354 aa22.88■■□□□ 1.25
SCRN1-203ENST00000409570 TBC1D2BQ9UPU7 963 aa22.88■■□□□ 1.25
SCRN1-203ENST00000409570 COL3A1P02461 1466 aaPredicted RBP22.87■■□□□ 1.25
SCRN1-203ENST00000409570 ZNF790Q6PG37 636 aa22.87■■□□□ 1.25
SCRN1-203ENST00000409570 IL17REQ8NFR9 667 aa22.87■■□□□ 1.25
SCRN1-203ENST00000409570 KIF7Q2M1P5 1343 aa22.85■■□□□ 1.25
SCRN1-203ENST00000409570 LTBP3Q9NS15 1303 aa22.85■■□□□ 1.25
SCRN1-203ENST00000409570 PER1O15534 1290 aaPredicted RBP22.85■■□□□ 1.25
SCRN1-203ENST00000409570 IL6STP40189 918 aaPredicted RBP22.85■■□□□ 1.25
SCRN1-203ENST00000409570 TEFQ10587 303 aa22.85■■□□□ 1.25
SCRN1-203ENST00000409570 TEX13AQ9BXU3 409 aaPredicted RBP22.85■■□□□ 1.25
SCRN1-203ENST00000409570 ZNF330Q9Y3S2 320 aaPredicted RBP22.85■■□□□ 1.25
SCRN1-203ENST00000409570 CC2D1BQ5T0F9 858 aaKnown RBP22.84■■□□□ 1.25
SCRN1-203ENST00000409570 GNAT3A8MTJ3 354 aa22.83■■□□□ 1.25
SCRN1-203ENST00000409570 CAMTA2O94983 1202 aa22.83■■□□□ 1.25
SCRN1-203ENST00000409570 A1BGP04217 495 aa22.83■■□□□ 1.25
SCRN1-203ENST00000409570 TAOK3Q9H2K8 898 aa22.83■■□□□ 1.25
SCRN1-203ENST00000409570 SCN4AP35499 1836 aa22.82■■□□□ 1.24
SCRN1-203ENST00000409570 CHADLQ6NUI6 762 aa22.82■■□□□ 1.24
SCRN1-203ENST00000409570 GAS2L2Q8NHY3 880 aa22.82■■□□□ 1.24
SCRN1-203ENST00000409570 SETDB2Q96T68 719 aa22.82■■□□□ 1.24
SCRN1-203ENST00000409570 DDNO94850 711 aaPredicted RBP22.81■■□□□ 1.24
SCRN1-203ENST00000409570 POTEIP0CG38 1075 aa22.81■■□□□ 1.24
SCRN1-203ENST00000409570 POTEJP0CG39 1038 aa22.81■■□□□ 1.24
SCRN1-203ENST00000409570 SRGNP10124 158 aa22.81■■□□□ 1.24
SCRN1-203ENST00000409570 STYK1Q6J9G0 422 aa22.81■■□□□ 1.24
SCRN1-203ENST00000409570 CNBD1Q8NA66 436 aa22.81■■□□□ 1.24
SCRN1-203ENST00000409570 CNKSR1Q969H4 720 aa22.81■■□□□ 1.24
Retrieved 100 of 20,778 RNA–protein pairs in 47.4 ms