RNA–Protein interactions for RNA: ENST00000406256.7

GDPD3-202, Transcript of glycerophosphodiester phosphodiesterase domain containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GDPD3, Length 1,397 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GDPD3-202ENST00000406256 ZBTB7AO95365 584 aa20.83■□□□□ 0.92
GDPD3-202ENST00000406256 CCDC87Q9NVE4 849 aa20.83■□□□□ 0.92
GDPD3-202ENST00000406256 TSPYL4Q9UJ04 414 aa20.83■□□□□ 0.92
GDPD3-202ENST00000406256 USP16Q9Y5T5 823 aa20.83■□□□□ 0.92
GDPD3-202ENST00000406256 PTGER2P43116 358 aa20.82■□□□□ 0.92
GDPD3-202ENST00000406256 WWC1Q8IX03 1113 aa20.82■□□□□ 0.92
GDPD3-202ENST00000406256 SOS1Q07889 1333 aaPredicted RBP20.82■□□□□ 0.92
GDPD3-202ENST00000406256 GIGYF1O75420 1035 aaPredicted RBP20.81■□□□□ 0.92
GDPD3-202ENST00000406256 PHF14O94880 888 aa20.81■□□□□ 0.92
GDPD3-202ENST00000406256 SNRPA1P09661 255 aaKnown RBP20.8■□□□□ 0.92
GDPD3-202ENST00000406256 FLAD1Q8NFF5 587 aa20.8■□□□□ 0.92
GDPD3-202ENST00000406256 CFAP44Q96MT7 982 aa20.8■□□□□ 0.92
GDPD3-202ENST00000406256 MTFR1LQ9H019 292 aa20.8■□□□□ 0.92
GDPD3-202ENST00000406256 RTCBQ9Y3I0 505 aaKnown RBP20.8■□□□□ 0.92
GDPD3-202ENST00000406256 SLC16A10Q8TF71 515 aa20.79■□□□□ 0.92
GDPD3-202ENST00000406256 ARHGEF1Q92888 912 aaKnown RBP20.79■□□□□ 0.92
GDPD3-202ENST00000406256 TEX13AQ9BXU3 409 aaPredicted RBP20.79■□□□□ 0.92
GDPD3-202ENST00000406256 BCORQ6W2J9 1755 aa20.79■□□□□ 0.92
GDPD3-202ENST00000406256 SCN7AQ01118 1682 aa20.79■□□□□ 0.92
GDPD3-202ENST00000406256 KRT24Q2M2I5 525 aa20.78■□□□□ 0.92
GDPD3-202ENST00000406256 MBIPQ9NS73 344 aa20.78■□□□□ 0.92
GDPD3-202ENST00000406256 ATF5Q9Y2D1 282 aaPredicted RBP20.78■□□□□ 0.92
GDPD3-202ENST00000406256 ZNF521Q96K83 1311 aa20.77■□□□□ 0.92
GDPD3-202ENST00000406256 STARD3NLO95772 234 aa20.77■□□□□ 0.92
GDPD3-202ENST00000406256 A1BGP04217 495 aa20.77■□□□□ 0.92
GDPD3-202ENST00000406256 ADRA2BP18089 450 aa20.77■□□□□ 0.92
GDPD3-202ENST00000406256 IFT57Q9NWB7 429 aa20.77■□□□□ 0.92
GDPD3-202ENST00000406256 COL15A1P39059 1388 aa20.77■□□□□ 0.91
GDPD3-202ENST00000406256 EIF5P55010 431 aaKnown RBP20.76■□□□□ 0.91
GDPD3-202ENST00000406256 SPON1Q9HCB6 807 aa20.76■□□□□ 0.91
GDPD3-202ENST00000406256 NBPF26B4DH59 902 aa20.75■□□□□ 0.91
GDPD3-202ENST00000406256 TRAPPC3LQ5T215 181 aa20.75■□□□□ 0.91
GDPD3-202ENST00000406256 NBPF10Q6P3W6 841 aaKnown RBP20.75■□□□□ 0.91
GDPD3-202ENST00000406256 NBPF15Q8N660 670 aa20.75■□□□□ 0.91
GDPD3-202ENST00000406256 LAS1LQ9Y4W2 734 aaKnown RBP20.75■□□□□ 0.91
GDPD3-202ENST00000406256 PIP4K2AP48426 406 aaPredicted RBP20.74■□□□□ 0.91
GDPD3-202ENST00000406256 GNAI1P63096 354 aa20.74■□□□□ 0.91
GDPD3-202ENST00000406256 SALL2Q9Y467 1007 aaPredicted RBP20.74■□□□□ 0.91
GDPD3-202ENST00000406256 IL16Q14005 1332 aa20.74■□□□□ 0.91
GDPD3-202ENST00000406256 USP42Q9H9J4 1324 aaKnown RBP20.74■□□□□ 0.91
GDPD3-202ENST00000406256 CANXP27824 592 aaKnown RBP20.73■□□□□ 0.91
GDPD3-202ENST00000406256 SRP68Q9UHB9 627 aaKnown RBP20.73■□□□□ 0.91
GDPD3-202ENST00000406256 MSH5O43196 834 aa20.72■□□□□ 0.91
GDPD3-202ENST00000406256 IL6STP40189 918 aaPredicted RBP20.72■□□□□ 0.91
GDPD3-202ENST00000406256 CALD1Q05682 793 aaKnown RBP20.72■□□□□ 0.91
GDPD3-202ENST00000406256 MSL1Q68DK7 614 aa20.72■□□□□ 0.91
GDPD3-202ENST00000406256 SPINK5Q9NQ38 1064 aaPredicted RBP20.72■□□□□ 0.91
GDPD3-202ENST00000406256 GYS1P13807 737 aa20.72■□□□□ 0.91
GDPD3-202ENST00000406256 GOLGB1Q14789 3259 aaKnown RBP20.71■□□□□ 0.91
GDPD3-202ENST00000406256 LRP10Q7Z4F1 713 aa20.71■□□□□ 0.91
GDPD3-202ENST00000406256 WDR63Q8IWG1 891 aa20.71■□□□□ 0.91
GDPD3-202ENST00000406256 NGEFQ8N5V2 710 aa20.71■□□□□ 0.91
GDPD3-202ENST00000406256 TSR2Q969E8 191 aaKnown RBP20.71■□□□□ 0.91
GDPD3-202ENST00000406256 BCL2L12Q9HB09 334 aa20.71■□□□□ 0.91
GDPD3-202ENST00000406256 AFDNP55196 1824 aaKnown RBP20.7■□□□□ 0.9
GDPD3-202ENST00000406256 PDIA6Q15084 440 aa20.7■□□□□ 0.9
GDPD3-202ENST00000406256 NUP98P52948 1817 aa20.69■□□□□ 0.9
GDPD3-202ENST00000406256 RFC4P35249 363 aa20.69■□□□□ 0.9
GDPD3-202ENST00000406256 NARFQ9UHQ1 456 aa20.69■□□□□ 0.9
GDPD3-202ENST00000406256 KIF13BQ9NQT8 1826 aa20.68■□□□□ 0.9
GDPD3-202ENST00000406256 NRXN2Q9P2S2 1712 aa20.68■□□□□ 0.9
GDPD3-202ENST00000406256 C8orf58Q8NAV2 365 aa20.68■□□□□ 0.9
GDPD3-202ENST00000406256 HOXB7P09629 217 aa20.67■□□□□ 0.9
GDPD3-202ENST00000406256 FKBP8Q14318 412 aa20.67■□□□□ 0.9
GDPD3-202ENST00000406256 PROSER3Q2NL68 480 aa20.67■□□□□ 0.9
GDPD3-202ENST00000406256 DUSP27Q5VZP5 1158 aa20.67■□□□□ 0.9
GDPD3-202ENST00000406256 ERBB4Q15303 1308 aa20.67■□□□□ 0.9
GDPD3-202ENST00000406256 FANCIQ9NVI1 1328 aa20.67■□□□□ 0.9
GDPD3-202ENST00000406256 KIAA1551Q9HCM1 1747 aa20.66■□□□□ 0.9
GDPD3-202ENST00000406256 USPL1Q5W0Q7 1092 aa20.66■□□□□ 0.9
GDPD3-202ENST00000406256 TSPYL6Q8N831 410 aa20.66■□□□□ 0.9
GDPD3-202ENST00000406256 CAMTA2O94983 1202 aa20.65■□□□□ 0.9
GDPD3-202ENST00000406256 TBC1D2BQ9UPU7 963 aa20.65■□□□□ 0.9
GDPD3-202ENST00000406256 UTRNP46939 3433 aa20.65■□□□□ 0.9
GDPD3-202ENST00000406256 EIF2S2P20042 333 aaKnown RBP20.64■□□□□ 0.89
GDPD3-202ENST00000406256 ANXA1P04083 346 aa20.63■□□□□ 0.89
GDPD3-202ENST00000406256 NLGN1Q8N2Q7 840 aa20.63■□□□□ 0.89
GDPD3-202ENST00000406256 ARXQ96QS3 562 aa20.63■□□□□ 0.89
GDPD3-202ENST00000406256 ZNF330Q9Y3S2 320 aaPredicted RBP20.63■□□□□ 0.89
GDPD3-202ENST00000406256 CACNA1FO60840 1977 aa20.63■□□□□ 0.89
GDPD3-202ENST00000406256 A0A087WZG4 1122 aa20.62■□□□□ 0.89
GDPD3-202ENST00000406256 POLD1P28340 1107 aa20.62■□□□□ 0.89
GDPD3-202ENST00000406256 TM4SF1P30408 202 aa20.62■□□□□ 0.89
GDPD3-202ENST00000406256 DDR1Q08345 913 aa20.62■□□□□ 0.89
GDPD3-202ENST00000406256 NECTIN2Q92692 538 aa20.62■□□□□ 0.89
GDPD3-202ENST00000406256 ANKRD36CQ5JPF3 1778 aa20.61■□□□□ 0.89
GDPD3-202ENST00000406256 ELL2O00472 640 aaPredicted RBP20.61■□□□□ 0.89
GDPD3-202ENST00000406256 ZPR1O75312 459 aa20.61■□□□□ 0.89
GDPD3-202ENST00000406256 MMP10P09238 476 aa20.61■□□□□ 0.89
GDPD3-202ENST00000406256 TTLL7Q6ZT98 887 aa20.61■□□□□ 0.89
GDPD3-202ENST00000406256 DZIP3Q86Y13 1208 aaKnown RBP20.61■□□□□ 0.89
GDPD3-202ENST00000406256 MYL6BP14649 208 aa20.6■□□□□ 0.89
GDPD3-202ENST00000406256 HDGFL1Q5TGJ6 251 aa20.6■□□□□ 0.89
GDPD3-202ENST00000406256 NFIXQ14938 502 aa20.59■□□□□ 0.89
GDPD3-202ENST00000406256 FHDC1Q9C0D6 1143 aaPredicted RBP20.59■□□□□ 0.89
GDPD3-202ENST00000406256 DDX21Q9NR30 783 aaKnown RBP eCLIP20.59■□□□□ 0.89
GDPD3-202ENST00000406256 CHPF2Q9P2E5 772 aa20.59■□□□□ 0.89
GDPD3-202ENST00000406256 ANKRD31Q8N7Z5 1873 aa20.59■□□□□ 0.89
GDPD3-202ENST00000406256 ARFGEF2Q9Y6D5 1785 aa20.59■□□□□ 0.89
GDPD3-202ENST00000406256 POLRMTO00411 1230 aaKnown RBP20.59■□□□□ 0.89
Retrieved 100 of 20,778 RNA–protein pairs in 9.9 ms