RNA–Protein interactions for RNA: ENST00000402555.2

HMGB1P20-201, Transcript of high mobility group box 1 pseudogene 20, humanhuman

BASIC

Gene HMGB1P20, Length 677 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P20-201ENST00000402555 HMOX1P09601 288 aa7.81□□□□□ -1.16
HMGB1P20-201ENST00000402555 PLEKHO1Q53GL0 409 aaPredicted RBP7.81□□□□□ -1.16
HMGB1P20-201ENST00000402555 SLC27A3Q5K4L6 730 aa7.81□□□□□ -1.16
HMGB1P20-201ENST00000402555 ZNF530Q6P9A1 599 aaPredicted RBP7.81□□□□□ -1.16
HMGB1P20-201ENST00000402555 IFNL2Q8IZJ0 200 aa7.81□□□□□ -1.16
HMGB1P20-201ENST00000402555 TAOK2Q9UL54 1235 aa7.81□□□□□ -1.16
HMGB1P20-201ENST00000402555 NPC1L1Q9UHC9 1359 aa7.81□□□□□ -1.16
HMGB1P20-201ENST00000402555 TMOD3Q9NYL9 352 aa7.8□□□□□ -1.16
HMGB1P20-201ENST00000402555 PPP1R1BQ9UD71 204 aaPredicted RBP7.8□□□□□ -1.16
HMGB1P20-201ENST00000402555 KDRP35968 1356 aa7.8□□□□□ -1.16
HMGB1P20-201ENST00000402555 COL3A1P02461 1466 aaPredicted RBP7.8□□□□□ -1.16
HMGB1P20-201ENST00000402555 PNPLA7Q6ZV29 1317 aa7.79□□□□□ -1.16
HMGB1P20-201ENST00000402555 KDM6AO15550 1401 aaPredicted RBP7.79□□□□□ -1.16
HMGB1P20-201ENST00000402555 DIAPH1O60610 1272 aaKnown RBP7.79□□□□□ -1.16
HMGB1P20-201ENST00000402555 ECM2O94769 699 aaPredicted RBP7.79□□□□□ -1.16
HMGB1P20-201ENST00000402555 PTGER2P43116 358 aa7.79□□□□□ -1.16
HMGB1P20-201ENST00000402555 MICALL2Q8IY33 904 aa7.79□□□□□ -1.16
HMGB1P20-201ENST00000402555 MARVELD3Q96A59 401 aa7.79□□□□□ -1.16
HMGB1P20-201ENST00000402555 TFCP2L1Q9NZI6 479 aa7.79□□□□□ -1.16
HMGB1P20-201ENST00000402555 ASAP1Q9ULH1 1129 aa7.79□□□□□ -1.16
HMGB1P20-201ENST00000402555 C5P01031 1676 aa7.79□□□□□ -1.16
HMGB1P20-201ENST00000402555 TAF1LQ8IZX4 1826 aa7.78□□□□□ -1.16
HMGB1P20-201ENST00000402555 U2SURPO15042 1029 aaKnown RBP7.78□□□□□ -1.16
HMGB1P20-201ENST00000402555 HOXB3P14651 431 aaPredicted RBP7.78□□□□□ -1.16
HMGB1P20-201ENST00000402555 AMOTQ4VCS5 1084 aa7.78□□□□□ -1.16
HMGB1P20-201ENST00000402555 SMIM5Q71RC9 77 aa7.78□□□□□ -1.16
HMGB1P20-201ENST00000402555 AMIGO3Q86WK7 504 aa7.78□□□□□ -1.16
HMGB1P20-201ENST00000402555 SMARCC1Q92922 1105 aaPredicted RBP7.78□□□□□ -1.16
HMGB1P20-201ENST00000402555 MTFR1LQ9H019 292 aa7.78□□□□□ -1.16
HMGB1P20-201ENST00000402555 ATG3Q9NT62 314 aa7.78□□□□□ -1.16
HMGB1P20-201ENST00000402555 PLEKHG2Q9H7P9 1386 aa7.78□□□□□ -1.16
HMGB1P20-201ENST00000402555 LOC102724428A0A0B4J2F2 783 aa7.77□□□□□ -1.17
HMGB1P20-201ENST00000402555 ERVV-2B6SEH9 535 aa7.77□□□□□ -1.17
HMGB1P20-201ENST00000402555 PPP2R1AP30153 589 aa7.77□□□□□ -1.17
HMGB1P20-201ENST00000402555 SIK1P57059 783 aa7.77□□□□□ -1.17
HMGB1P20-201ENST00000402555 CABP4P57796 275 aa7.77□□□□□ -1.17
HMGB1P20-201ENST00000402555 ITPK1Q13572 414 aa7.77□□□□□ -1.17
HMGB1P20-201ENST00000402555 C1orf141Q5JVX7 400 aa7.77□□□□□ -1.17
HMGB1P20-201ENST00000402555 COL23A1Q86Y22 540 aaPredicted RBP7.77□□□□□ -1.17
HMGB1P20-201ENST00000402555 LINC00116Q8NCU8 138 aa7.77□□□□□ -1.17
HMGB1P20-201ENST00000402555 FBXO22Q8NEZ5 403 aa7.77□□□□□ -1.17
HMGB1P20-201ENST00000402555 DCAF5Q96JK2 942 aa7.77□□□□□ -1.17
HMGB1P20-201ENST00000402555 C4BP0C0L5 1744 aa7.77□□□□□ -1.17
HMGB1P20-201ENST00000402555 QSER1Q2KHR3 1735 aa7.77□□□□□ -1.17
HMGB1P20-201ENST00000402555 PHF14O94880 888 aa7.76□□□□□ -1.17
HMGB1P20-201ENST00000402555 HSP90AB1P08238 724 aaKnown RBP7.76□□□□□ -1.17
HMGB1P20-201ENST00000402555 MTHFSDQ2M296 383 aaKnown RBP7.76□□□□□ -1.17
HMGB1P20-201ENST00000402555 MSL1Q68DK7 614 aa7.76□□□□□ -1.17
HMGB1P20-201ENST00000402555 TMEM92Q6UXU6 159 aa7.76□□□□□ -1.17
HMGB1P20-201ENST00000402555 NFATC2IPQ8NCF5 419 aa7.76□□□□□ -1.17
HMGB1P20-201ENST00000402555 SLC4A9Q96Q91 983 aa7.76□□□□□ -1.17
HMGB1P20-201ENST00000402555 LGR6Q9HBX8 967 aa7.76□□□□□ -1.17
HMGB1P20-201ENST00000402555 SCN11AQ9UI33 1791 aa7.75□□□□□ -1.17
HMGB1P20-201ENST00000402555 RGL2O15211 777 aa7.75□□□□□ -1.17
HMGB1P20-201ENST00000402555 ATP6V1AP38606 617 aa7.75□□□□□ -1.17
HMGB1P20-201ENST00000402555 AKAP4Q5JQC9 854 aa7.75□□□□□ -1.17
HMGB1P20-201ENST00000402555 AK7Q96M32 723 aa7.75□□□□□ -1.17
HMGB1P20-201ENST00000402555 FHDC1Q9C0D6 1143 aaPredicted RBP7.75□□□□□ -1.17
HMGB1P20-201ENST00000402555 STK24Q9Y6E0 443 aa7.75□□□□□ -1.17
HMGB1P20-201ENST00000402555 VIRMAQ69YN4 1812 aaKnown RBP7.75□□□□□ -1.17
HMGB1P20-201ENST00000402555 UBR3Q6ZT12 1888 aa7.75□□□□□ -1.17
HMGB1P20-201ENST00000402555 STK25O00506 426 aa7.74□□□□□ -1.17
HMGB1P20-201ENST00000402555 GNPATO15228 680 aa7.74□□□□□ -1.17
HMGB1P20-201ENST00000402555 RNMTO43148 476 aaKnown RBP7.74□□□□□ -1.17
HMGB1P20-201ENST00000402555 PTCD1O75127 700 aaKnown RBP7.74□□□□□ -1.17
HMGB1P20-201ENST00000402555 PRKAR2BP31323 418 aa7.74□□□□□ -1.17
HMGB1P20-201ENST00000402555 EMP3P54852 163 aa7.74□□□□□ -1.17
HMGB1P20-201ENST00000402555 DDX10Q13206 875 aaKnown RBP7.74□□□□□ -1.17
HMGB1P20-201ENST00000402555 SLC16A10Q8TF71 515 aa7.74□□□□□ -1.17
HMGB1P20-201ENST00000402555 PHACTR3Q96KR7 559 aa7.74□□□□□ -1.17
HMGB1P20-201ENST00000402555 CFAP53Q96M91 514 aa7.74□□□□□ -1.17
HMGB1P20-201ENST00000402555 ARXQ96QS3 562 aa7.74□□□□□ -1.17
HMGB1P20-201ENST00000402555 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP7.73□□□□□ -1.17
HMGB1P20-201ENST00000402555 U2AF1L5P0DN76 240 aaPredicted RBP7.73□□□□□ -1.17
HMGB1P20-201ENST00000402555 POLD1P28340 1107 aa7.73□□□□□ -1.17
HMGB1P20-201ENST00000402555 U2AF1Q01081 240 aaKnown RBP eCLIP7.73□□□□□ -1.17
HMGB1P20-201ENST00000402555 SLC39A6Q13433 755 aa7.73□□□□□ -1.17
HMGB1P20-201ENST00000402555 SYT17Q9BSW7 474 aa7.73□□□□□ -1.17
HMGB1P20-201ENST00000402555 MFRPQ9BY79 579 aa7.73□□□□□ -1.17
HMGB1P20-201ENST00000402555 RSPH6AQ9H0K4 717 aa7.73□□□□□ -1.17
HMGB1P20-201ENST00000402555 SLC52A2Q9HAB3 445 aa7.73□□□□□ -1.17
HMGB1P20-201ENST00000402555 COL24A1Q17RW2 1714 aa7.72□□□□□ -1.17
HMGB1P20-201ENST00000402555 MYH14Q7Z406 1995 aaKnown RBP7.72□□□□□ -1.17
HMGB1P20-201ENST00000402555 NUDCQ9Y266 331 aa7.72□□□□□ -1.17
HMGB1P20-201ENST00000402555 MRC1P22897 1456 aa7.72□□□□□ -1.17
HMGB1P20-201ENST00000402555 COL5A3P25940 1745 aaPredicted RBP7.72□□□□□ -1.17
HMGB1P20-201ENST00000402555 MAP3K5Q99683 1374 aa7.71□□□□□ -1.17
HMGB1P20-201ENST00000402555 ADAMTS7Q9UKP4 1686 aa7.71□□□□□ -1.18
HMGB1P20-201ENST00000402555 POTEB3A0JP26 581 aa7.71□□□□□ -1.18
HMGB1P20-201ENST00000402555 GNAT3A8MTJ3 354 aa7.71□□□□□ -1.18
HMGB1P20-201ENST00000402555 HOXB1P14653 301 aaPredicted RBP7.71□□□□□ -1.18
HMGB1P20-201ENST00000402555 DOK7Q18PE1 504 aa7.71□□□□□ -1.18
HMGB1P20-201ENST00000402555 POTEBQ6S5H4 581 aa7.71□□□□□ -1.18
HMGB1P20-201ENST00000402555 DNAJC10Q8IXB1 793 aa7.71□□□□□ -1.18
HMGB1P20-201ENST00000402555 FLAD1Q8NFF5 587 aa7.71□□□□□ -1.18
HMGB1P20-201ENST00000402555 IL17REQ8NFR9 667 aa7.71□□□□□ -1.18
HMGB1P20-201ENST00000402555 NLGN2Q8NFZ4 835 aa7.71□□□□□ -1.18
HMGB1P20-201ENST00000402555 GAS2L2Q8NHY3 880 aa7.71□□□□□ -1.18
HMGB1P20-201ENST00000402555 TJP1Q07157 1748 aa7.71□□□□□ -1.18
HMGB1P20-201ENST00000402555 ZNF831Q5JPB2 1677 aa7.7□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms