RNA–Protein interactions for RNA: ENST00000397643.3

CUX2-202, Transcript of cut like homeobox 2, humanhuman

TSL 1 (best)

Gene CUX2, Length 890 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUX2-202ENST00000397643 RRAGCQ9HB90 399 aa22.05■■□□□ 1.12
CUX2-202ENST00000397643 HSPA5P11021 654 aaKnown RBP22.03■■□□□ 1.12
CUX2-202ENST00000397643 CYP19A1P11511 503 aaPredicted RBP22.03■■□□□ 1.12
CUX2-202ENST00000397643 PRELPP51888 382 aa22.03■■□□□ 1.12
CUX2-202ENST00000397643 RASSF7Q02833 373 aa22.03■■□□□ 1.12
CUX2-202ENST00000397643 AKAP4Q5JQC9 854 aa22.03■■□□□ 1.12
CUX2-202ENST00000397643 SLC52A2Q9HAB3 445 aa22.03■■□□□ 1.12
CUX2-202ENST00000397643 CLSPNQ9HAW4 1339 aa22.03■■□□□ 1.12
CUX2-202ENST00000397643 VIRMAQ69YN4 1812 aaKnown RBP22.02■■□□□ 1.12
CUX2-202ENST00000397643 NFIXQ14938 502 aa22.02■■□□□ 1.12
CUX2-202ENST00000397643 BCL2L12Q9HB09 334 aa22.02■■□□□ 1.12
CUX2-202ENST00000397643 LGR6Q9HBX8 967 aa22.02■■□□□ 1.12
CUX2-202ENST00000397643 ZC3H4Q9UPT8 1303 aaKnown RBP22.02■■□□□ 1.12
CUX2-202ENST00000397643 COL15A1P39059 1388 aa22.01■■□□□ 1.11
CUX2-202ENST00000397643 ZPR1O75312 459 aa22.01■■□□□ 1.11
CUX2-202ENST00000397643 EIF4G2P78344 907 aaKnown RBP eCLIP22.01■■□□□ 1.11
CUX2-202ENST00000397643 NARFQ9UHQ1 456 aa22.01■■□□□ 1.11
CUX2-202ENST00000397643 SLC39A6Q13433 755 aa22■■□□□ 1.11
CUX2-202ENST00000397643 COL13A1Q5TAT6 717 aaPredicted RBP22■■□□□ 1.11
CUX2-202ENST00000397643 ZBTB1Q9Y2K1 713 aa22■■□□□ 1.11
CUX2-202ENST00000397643 SMC1BQ8NDV3 1235 aa21.99■■□□□ 1.11
CUX2-202ENST00000397643 UBR2Q8IWV8 1755 aa21.99■■□□□ 1.11
CUX2-202ENST00000397643 CARMIL3Q8ND23 1372 aa21.99■■□□□ 1.11
CUX2-202ENST00000397643 TIAM2Q8IVF5 1701 aa21.98■■□□□ 1.11
CUX2-202ENST00000397643 RNMTO43148 476 aaKnown RBP21.98■■□□□ 1.11
CUX2-202ENST00000397643 LMNB1P20700 586 aa21.96■■□□□ 1.11
CUX2-202ENST00000397643 AMER1Q5JTC6 1135 aaPredicted RBP21.96■■□□□ 1.11
CUX2-202ENST00000397643 GLTPD2A6NH11 291 aa21.95■■□□□ 1.1
CUX2-202ENST00000397643 NFKBIEO00221 500 aa21.95■■□□□ 1.1
CUX2-202ENST00000397643 SERPINB2P05120 415 aa21.95■■□□□ 1.1
CUX2-202ENST00000397643 VSIG10Q8N0Z9 540 aa21.94■■□□□ 1.1
CUX2-202ENST00000397643 KNSTRNQ9Y448 316 aa21.94■■□□□ 1.1
CUX2-202ENST00000397643 CCDC88AQ3V6T2 1871 aa21.94■■□□□ 1.1
CUX2-202ENST00000397643 ANKRD31Q8N7Z5 1873 aa21.94■■□□□ 1.1
CUX2-202ENST00000397643 HMOX1P09601 288 aa21.93■■□□□ 1.1
CUX2-202ENST00000397643 TTLL6Q8N841 843 aa21.93■■□□□ 1.1
CUX2-202ENST00000397643 MTHFSDQ2M296 383 aaKnown RBP21.92■■□□□ 1.1
CUX2-202ENST00000397643 C2CD5Q86YS7 1000 aa21.92■■□□□ 1.1
CUX2-202ENST00000397643 COL11A2P13942 1736 aaPredicted RBP21.92■■□□□ 1.1
CUX2-202ENST00000397643 SCN7AQ01118 1682 aa21.91■■□□□ 1.1
CUX2-202ENST00000397643 VEGFAP15692 232 aaPredicted RBP21.91■■□□□ 1.1
CUX2-202ENST00000397643 POTECB2RU33 542 aa21.9■■□□□ 1.1
CUX2-202ENST00000397643 EIF5P55010 431 aaKnown RBP21.9■■□□□ 1.1
CUX2-202ENST00000397643 CANXP27824 592 aaKnown RBP21.89■■□□□ 1.09
CUX2-202ENST00000397643 H0YIN7 160 aa21.88■■□□□ 1.09
CUX2-202ENST00000397643 FER1L6Q2WGJ9 1857 aa21.88■■□□□ 1.09
CUX2-202ENST00000397643 DICER1Q9UPY3 1922 aaKnown RBP21.86■■□□□ 1.09
CUX2-202ENST00000397643 TBC1D9BQ66K14 1250 aa21.86■■□□□ 1.09
CUX2-202ENST00000397643 BICDL1Q6ZP65 573 aa21.86■■□□□ 1.09
CUX2-202ENST00000397643 SIPA1L3O60292 1781 aaPredicted RBP21.86■■□□□ 1.09
CUX2-202ENST00000397643 COL3A1P02461 1466 aaPredicted RBP21.85■■□□□ 1.09
CUX2-202ENST00000397643 TNS4Q8IZW8 715 aa21.85■■□□□ 1.09
CUX2-202ENST00000397643 ZNF496Q96IT1 587 aaPredicted RBP21.85■■□□□ 1.09
CUX2-202ENST00000397643 STARD3NLO95772 234 aa21.84■■□□□ 1.09
CUX2-202ENST00000397643 HSPA1AP0DMV8 641 aaKnown RBP21.84■■□□□ 1.09
CUX2-202ENST00000397643 HSPA1BP0DMV9 641 aaKnown RBP21.84■■□□□ 1.09
CUX2-202ENST00000397643 PRR5LQ6MZQ0 368 aa21.84■■□□□ 1.09
CUX2-202ENST00000397643 A0A087WZG4 1122 aa21.83■■□□□ 1.09
CUX2-202ENST00000397643 DIAPH1O60610 1272 aaKnown RBP21.83■■□□□ 1.09
CUX2-202ENST00000397643 BRIP1Q9BX63 1249 aa21.83■■□□□ 1.09
CUX2-202ENST00000397643 HEG1Q9ULI3 1381 aa21.83■■□□□ 1.08
CUX2-202ENST00000397643 KIF7Q2M1P5 1343 aa21.82■■□□□ 1.08
CUX2-202ENST00000397643 PER1O15534 1290 aaPredicted RBP21.82■■□□□ 1.08
CUX2-202ENST00000397643 CAPN15O75808 1086 aa21.82■■□□□ 1.08
CUX2-202ENST00000397643 TTC5Q8N0Z6 440 aa21.82■■□□□ 1.08
CUX2-202ENST00000397643 CCDC24Q8N4L8 307 aa21.82■■□□□ 1.08
CUX2-202ENST00000397643 LTBP3Q9NS15 1303 aa21.81■■□□□ 1.08
CUX2-202ENST00000397643 C21orf2O43822 256 aa21.81■■□□□ 1.08
CUX2-202ENST00000397643 ZNF790Q6PG37 636 aa21.81■■□□□ 1.08
CUX2-202ENST00000397643 IL17REQ8NFR9 667 aa21.81■■□□□ 1.08
CUX2-202ENST00000397643 ZNF622Q969S3 477 aaKnown RBP eCLIP21.81■■□□□ 1.08
CUX2-202ENST00000397643 PDE6BP35913 854 aa21.8■■□□□ 1.08
CUX2-202ENST00000397643 PDZRN3Q9UPQ7 1066 aa21.8■■□□□ 1.08
CUX2-202ENST00000397643 TBC1D2BQ9UPU7 963 aa21.8■■□□□ 1.08
CUX2-202ENST00000397643 BCORQ6W2J9 1755 aa21.79■■□□□ 1.08
CUX2-202ENST00000397643 ARFGEF2Q9Y6D5 1785 aa21.79■■□□□ 1.08
CUX2-202ENST00000397643 SLX4Q8IY92 1834 aa21.79■■□□□ 1.08
CUX2-202ENST00000397643 ERFEQ4G0M1 354 aa21.79■■□□□ 1.08
CUX2-202ENST00000397643 DPY19L2Q6NUT2 758 aa21.79■■□□□ 1.08
CUX2-202ENST00000397643 ZNF219Q9P2Y4 722 aaPredicted RBP21.79■■□□□ 1.08
CUX2-202ENST00000397643 IL6STP40189 918 aaPredicted RBP21.78■■□□□ 1.08
CUX2-202ENST00000397643 CAMTA2O94983 1202 aa21.77■■□□□ 1.08
CUX2-202ENST00000397643 POTEIP0CG38 1075 aa21.77■■□□□ 1.08
CUX2-202ENST00000397643 POTEJP0CG39 1038 aa21.77■■□□□ 1.08
CUX2-202ENST00000397643 TEX13AQ9BXU3 409 aaPredicted RBP21.77■■□□□ 1.08
CUX2-202ENST00000397643 TAOK3Q9H2K8 898 aa21.77■■□□□ 1.08
CUX2-202ENST00000397643 CACNA1SQ13698 1873 aa21.77■■□□□ 1.08
CUX2-202ENST00000397643 CEMIPQ8WUJ3 1361 aa21.76■■□□□ 1.07
CUX2-202ENST00000397643 TEFQ10587 303 aa21.76■■□□□ 1.07
CUX2-202ENST00000397643 CC2D1BQ5T0F9 858 aaKnown RBP21.76■■□□□ 1.07
CUX2-202ENST00000397643 ZNF330Q9Y3S2 320 aaPredicted RBP21.76■■□□□ 1.07
CUX2-202ENST00000397643 GNAT3A8MTJ3 354 aa21.75■■□□□ 1.07
CUX2-202ENST00000397643 A1BGP04217 495 aa21.75■■□□□ 1.07
CUX2-202ENST00000397643 CNBD1Q8NA66 436 aa21.75■■□□□ 1.07
CUX2-202ENST00000397643 DDNO94850 711 aaPredicted RBP21.74■■□□□ 1.07
CUX2-202ENST00000397643 SRGNP10124 158 aa21.74■■□□□ 1.07
CUX2-202ENST00000397643 STYK1Q6J9G0 422 aa21.74■■□□□ 1.07
CUX2-202ENST00000397643 CHADLQ6NUI6 762 aa21.74■■□□□ 1.07
CUX2-202ENST00000397643 PRPF40BQ6NWY9 871 aaKnown RBP21.74■■□□□ 1.07
CUX2-202ENST00000397643 GAS2L2Q8NHY3 880 aa21.74■■□□□ 1.07
Retrieved 100 of 20,778 RNA–protein pairs in 84.6 ms