RNA–Protein interactions for RNA: ENST00000396594.7

GNE-202, Transcript of glucosamine (UDP-N-acetyl)-2-epimerase/N-acetylmannosamine kinase, humanhuman

TSL 1 (best) BASIC

Gene GNE, Length 5,298 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GNE-202ENST00000396594 EIF4G3O43432 1585 aaKnown RBP18.29■□□□□ 0.52
GNE-202ENST00000396594 PPP4R3AQ6IN85 833 aa18.29■□□□□ 0.52
GNE-202ENST00000396594 RPGRQ92834 1020 aaKnown RBP18.29■□□□□ 0.52
GNE-202ENST00000396594 CUL5Q93034 780 aa18.29■□□□□ 0.52
GNE-202ENST00000396594 TMEM266Q2M3C6 531 aa18.29■□□□□ 0.52
GNE-202ENST00000396594 SERPINC1P01008 464 aa18.29■□□□□ 0.52
GNE-202ENST00000396594 KLHL34Q8N239 644 aa18.29■□□□□ 0.52
GNE-202ENST00000396594 ZNF397Q8NF99 534 aaPredicted RBP18.29■□□□□ 0.52
GNE-202ENST00000396594 NAPBQ9H115 298 aa18.29■□□□□ 0.52
GNE-202ENST00000396594 SLC4A3P48751 1232 aa18.29■□□□□ 0.52
GNE-202ENST00000396594 WAPLQ7Z5K2 1190 aa18.29■□□□□ 0.52
GNE-202ENST00000396594 NME9Q86XW9 330 aa18.29■□□□□ 0.52
GNE-202ENST00000396594 RBM27Q9P2N5 1060 aaKnown RBP18.29■□□□□ 0.52
GNE-202ENST00000396594 ZC3H6P61129 1189 aaKnown RBP18.28■□□□□ 0.52
GNE-202ENST00000396594 TSG101Q99816 390 aa18.28■□□□□ 0.52
GNE-202ENST00000396594 SIL1Q9H173 461 aa18.28■□□□□ 0.52
GNE-202ENST00000396594 PRPF40AO75400 957 aaKnown RBP18.28■□□□□ 0.52
GNE-202ENST00000396594 BMP2KLQ5H9B9 411 aa18.28■□□□□ 0.52
GNE-202ENST00000396594 AKAP4Q5JQC9 854 aa18.28■□□□□ 0.52
GNE-202ENST00000396594 TMTC2Q8N394 836 aa18.28■□□□□ 0.52
GNE-202ENST00000396594 UTP3Q9NQZ2 479 aaKnown RBP eCLIP18.28■□□□□ 0.524e-6■■■■■ 139.7
GNE-202ENST00000396594 ECHDC1Q9NTX5 307 aa18.28■□□□□ 0.52
GNE-202ENST00000396594 KANK3Q6NY19 840 aa18.28■□□□□ 0.52
GNE-202ENST00000396594 PBRM1Q86U86 1689 aa18.28■□□□□ 0.52
GNE-202ENST00000396594 ACEP12821 1306 aa18.27■□□□□ 0.52
GNE-202ENST00000396594 NEMFO60524 1076 aa18.27■□□□□ 0.52
GNE-202ENST00000396594 DZIP1Q86YF9 867 aaKnown RBP18.27■□□□□ 0.52
GNE-202ENST00000396594 KRI1Q8N9T8 703 aaKnown RBP18.27■□□□□ 0.52
GNE-202ENST00000396594 C1orf115Q9H7X2 142 aa18.27■□□□□ 0.52
GNE-202ENST00000396594 USP5P45974 858 aa18.27■□□□□ 0.52
GNE-202ENST00000396594 FLIIQ13045 1269 aa18.27■□□□□ 0.52
GNE-202ENST00000396594 MPHOSPH10O00566 681 aaKnown RBP18.27■□□□□ 0.51
GNE-202ENST00000396594 STXBP4Q6ZWJ1 553 aa18.27■□□□□ 0.51
GNE-202ENST00000396594 MYD88Q99836 296 aa18.27■□□□□ 0.51
GNE-202ENST00000396594 ATP10AO60312 1499 aa18.27■□□□□ 0.51
GNE-202ENST00000396594 ABCA5Q8WWZ7 1642 aa18.27■□□□□ 0.51
GNE-202ENST00000396594 RBM5P52756 815 aaKnown RBP eCLIP18.27■□□□□ 0.51
GNE-202ENST00000396594 ZNF76P36508 570 aa18.26■□□□□ 0.51
GNE-202ENST00000396594 HDAC1Q13547 482 aaPredicted RBP18.26■□□□□ 0.51
GNE-202ENST00000396594 SSH1Q8WYL5 1049 aa18.26■□□□□ 0.51
GNE-202ENST00000396594 FAM177BA6PVY3 158 aa18.26■□□□□ 0.51
GNE-202ENST00000396594 FIBPO43427 364 aa18.26■□□□□ 0.51
GNE-202ENST00000396594 MCM3P25205 808 aa18.26■□□□□ 0.51
GNE-202ENST00000396594 NYXQ9GZU5 481 aa18.26■□□□□ 0.51
GNE-202ENST00000396594 NUP133Q8WUM0 1156 aa18.26■□□□□ 0.51
GNE-202ENST00000396594 TBX22Q9Y458 520 aa18.26■□□□□ 0.51
GNE-202ENST00000396594 ST5P78524 1137 aa18.25■□□□□ 0.51
GNE-202ENST00000396594 ANO10Q9NW15 660 aa18.25■□□□□ 0.51
GNE-202ENST00000396594 POLR3DP05423 398 aaPredicted RBP18.25■□□□□ 0.51
GNE-202ENST00000396594 GBP3Q9H0R5 595 aa18.25■□□□□ 0.51
GNE-202ENST00000396594 ABCC1P33527 1531 aa18.25■□□□□ 0.51
GNE-202ENST00000396594 IDH1O75874 414 aaKnown RBP18.25■□□□□ 0.51
GNE-202ENST00000396594 ANAPC15P60006 121 aa18.25■□□□□ 0.51
GNE-202ENST00000396594 TRMT112Q9UI30 125 aaKnown RBP18.25■□□□□ 0.51
GNE-202ENST00000396594 EIF3JO75822 258 aaKnown RBP18.25■□□□□ 0.51
GNE-202ENST00000396594 CCDC152Q4G0S7 254 aa18.25■□□□□ 0.51
GNE-202ENST00000396594 BAG4O95429 457 aaKnown RBP18.24■□□□□ 0.51
GNE-202ENST00000396594 AMPD3Q01432 767 aa18.24■□□□□ 0.51
GNE-202ENST00000396594 MAP3K11Q16584 847 aa18.24■□□□□ 0.51
GNE-202ENST00000396594 JAKMIP3Q5VZ66 844 aa18.24■□□□□ 0.51
GNE-202ENST00000396594 DEF6Q9H4E7 631 aa18.24■□□□□ 0.51
GNE-202ENST00000396594 NPATQ14207 1427 aa18.24■□□□□ 0.51
GNE-202ENST00000396594 PDE4BQ07343 736 aa18.24■□□□□ 0.51
GNE-202ENST00000396594 PDCL2Q8N4E4 241 aa18.24■□□□□ 0.51
GNE-202ENST00000396594 SIRT1Q96EB6 747 aa18.24■□□□□ 0.51
GNE-202ENST00000396594 ZSCAN29Q8IWY8 852 aaPredicted RBP18.24■□□□□ 0.51
GNE-202ENST00000396594 ZNF444Q8N0Y2 327 aaPredicted RBP18.24■□□□□ 0.51
GNE-202ENST00000396594 PLXNC1O60486 1568 aa18.24■□□□□ 0.51
GNE-202ENST00000396594 CRACR2BQ8N4Y2 399 aaPredicted RBP18.24■□□□□ 0.51
GNE-202ENST00000396594 CWC27Q6UX04 472 aaKnown RBP18.23■□□□□ 0.51
GNE-202ENST00000396594 VPS36Q86VN1 386 aa18.23■□□□□ 0.51
GNE-202ENST00000396594 CERS3Q8IU89 383 aa18.23■□□□□ 0.51
GNE-202ENST00000396594 ANKRD24Q8TF21 1146 aa18.23■□□□□ 0.51
GNE-202ENST00000396594 PDCL3Q9H2J4 239 aa18.23■□□□□ 0.51
GNE-202ENST00000396594 CNNM2Q9H8M5 875 aa18.23■□□□□ 0.51
GNE-202ENST00000396594 MKNK2Q9HBH9 465 aa18.23■□□□□ 0.51
GNE-202ENST00000396594 GOLGA6L10A6NI86 522 aa18.23■□□□□ 0.51
GNE-202ENST00000396594 PRKCSHP14314 528 aaPredicted RBP18.23■□□□□ 0.51
GNE-202ENST00000396594 DDX19AQ9NUU7 478 aaKnown RBP18.23■□□□□ 0.51
GNE-202ENST00000396594 LIMCH1Q9UPQ0 1083 aa18.23■□□□□ 0.51
GNE-202ENST00000396594 ZNF213O14771 459 aa18.23■□□□□ 0.51
GNE-202ENST00000396594 GNAQP50148 359 aa18.23■□□□□ 0.51
GNE-202ENST00000396594 CATIPQ7Z7H3 387 aa18.23■□□□□ 0.51
GNE-202ENST00000396594 HLA-DOAP06340 250 aa18.23■□□□□ 0.51
GNE-202ENST00000396594 DDX46Q7L014 1031 aaKnown RBP18.23■□□□□ 0.51
GNE-202ENST00000396594 HOXB7P09629 217 aa18.22■□□□□ 0.51
GNE-202ENST00000396594 ZFYVE27Q5T4F4 411 aa18.22■□□□□ 0.51
GNE-202ENST00000396594 UPF3BQ9BZI7 483 aaKnown RBP18.22■□□□□ 0.51
GNE-202ENST00000396594 PARD3Q8TEW0 1356 aa18.22■□□□□ 0.51
GNE-202ENST00000396594 CCDC83Q8IWF9 413 aa18.22■□□□□ 0.51
GNE-202ENST00000396594 ARHGEF5Q12774 1597 aa18.21■□□□□ 0.51
GNE-202ENST00000396594 FOSBP53539 338 aa18.21■□□□□ 0.51
GNE-202ENST00000396594 ATP2B2Q01814 1243 aa18.21■□□□□ 0.51
GNE-202ENST00000396594 ATP7AQ04656 1500 aa18.21■□□□□ 0.51
GNE-202ENST00000396594 FAM114A1Q8IWE2 563 aa18.21■□□□□ 0.51
GNE-202ENST00000396594 CASTP20810 708 aaKnown RBP18.21■□□□□ 0.51
GNE-202ENST00000396594 SSRP1Q08945 709 aaKnown RBP18.21■□□□□ 0.51
GNE-202ENST00000396594 KRT23Q9C075 422 aa18.21■□□□□ 0.51
GNE-202ENST00000396594 ZSCAN12O43309 604 aa18.21■□□□□ 0.5
GNE-202ENST00000396594 FKBP15Q5T1M5 1219 aa18.21■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms