RNA–Protein interactions for RNA: ENST00000396545.4

TNFSF13-205, Transcript of TNF superfamily member 13, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene TNFSF13, Length 1,593 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFSF13-205ENST00000396545 ZNF526Q8TF50 670 aaPredicted RBP22.97■■□□□ 1.27
TNFSF13-205ENST00000396545 COL3A1P02461 1466 aaPredicted RBP22.97■■□□□ 1.27
TNFSF13-205ENST00000396545 KCPQ6ZWJ8 1503 aa22.97■■□□□ 1.27
TNFSF13-205ENST00000396545 DNAJC10Q8IXB1 793 aa22.97■■□□□ 1.27
TNFSF13-205ENST00000396545 BCS1LQ9Y276 419 aa22.97■■□□□ 1.27
TNFSF13-205ENST00000396545 NEFLP07196 543 aa22.95■■□□□ 1.26
TNFSF13-205ENST00000396545 DDR1Q08345 913 aa22.95■■□□□ 1.26
TNFSF13-205ENST00000396545 SLC39A6Q13433 755 aa22.95■■□□□ 1.26
TNFSF13-205ENST00000396545 SOS1Q07889 1333 aaPredicted RBP22.94■■□□□ 1.26
TNFSF13-205ENST00000396545 CYP19A1P11511 503 aaPredicted RBP22.93■■□□□ 1.26
TNFSF13-205ENST00000396545 KCNA3P22001 575 aa22.93■■□□□ 1.26
TNFSF13-205ENST00000396545 CFAP53Q96M91 514 aa22.93■■□□□ 1.26
TNFSF13-205ENST00000396545 UBR2Q8IWV8 1755 aa22.92■■□□□ 1.26
TNFSF13-205ENST00000396545 FCHSD2O94868 740 aa22.91■■□□□ 1.26
TNFSF13-205ENST00000396545 WDR43Q15061 677 aaKnown RBP eCLIP22.91■■□□□ 1.26
TNFSF13-205ENST00000396545 POLRMTO00411 1230 aaKnown RBP22.9■■□□□ 1.26
TNFSF13-205ENST00000396545 TM4SF1P30408 202 aa22.9■■□□□ 1.26
TNFSF13-205ENST00000396545 VSIG10Q8N0Z9 540 aa22.9■■□□□ 1.26
TNFSF13-205ENST00000396545 ARFGEF1Q9Y6D6 1849 aa22.9■■□□□ 1.26
TNFSF13-205ENST00000396545 ZPR1O75312 459 aa22.89■■□□□ 1.26
TNFSF13-205ENST00000396545 USPL1Q5W0Q7 1092 aa22.89■■□□□ 1.26
TNFSF13-205ENST00000396545 ARHGAP27Q6ZUM4 889 aa22.89■■□□□ 1.26
TNFSF13-205ENST00000396545 NUDCQ9Y266 331 aa22.89■■□□□ 1.26
TNFSF13-205ENST00000396545 COL15A1P39059 1388 aa22.89■■□□□ 1.25
TNFSF13-205ENST00000396545 ZBTB1Q9Y2K1 713 aa22.89■■□□□ 1.25
TNFSF13-205ENST00000396545 KIF3CO14782 793 aa22.88■■□□□ 1.25
TNFSF13-205ENST00000396545 PIM2Q9P1W9 311 aa22.88■■□□□ 1.25
TNFSF13-205ENST00000396545 U2SURPO15042 1029 aaKnown RBP22.87■■□□□ 1.25
TNFSF13-205ENST00000396545 NARFQ9UHQ1 456 aa22.87■■□□□ 1.25
TNFSF13-205ENST00000396545 DALRD3Q5D0E6 543 aaKnown RBP22.85■■□□□ 1.25
TNFSF13-205ENST00000396545 GAS2L2Q8NHY3 880 aa22.85■■□□□ 1.25
TNFSF13-205ENST00000396545 HSPA6P17066 643 aa22.84■■□□□ 1.25
TNFSF13-205ENST00000396545 CHRNA5P30532 468 aa22.84■■□□□ 1.25
TNFSF13-205ENST00000396545 NFIXQ14938 502 aa22.84■■□□□ 1.25
TNFSF13-205ENST00000396545 NRXN2Q9P2S2 1712 aa22.84■■□□□ 1.25
TNFSF13-205ENST00000396545 GNAT3A8MTJ3 354 aa22.84■■□□□ 1.25
TNFSF13-205ENST00000396545 TTC5Q8N0Z6 440 aa22.84■■□□□ 1.25
TNFSF13-205ENST00000396545 IL17REQ8NFR9 667 aa22.84■■□□□ 1.25
TNFSF13-205ENST00000396545 BCL2L12Q9HB09 334 aa22.84■■□□□ 1.25
TNFSF13-205ENST00000396545 ADAMTS8Q9UP79 889 aa22.84■■□□□ 1.25
TNFSF13-205ENST00000396545 SIPA1L3O60292 1781 aaPredicted RBP22.84■■□□□ 1.25
TNFSF13-205ENST00000396545 AFDNP55196 1824 aaKnown RBP22.83■■□□□ 1.24
TNFSF13-205ENST00000396545 STARD3NLO95772 234 aa22.81■■□□□ 1.24
TNFSF13-205ENST00000396545 TEFQ10587 303 aa22.81■■□□□ 1.24
TNFSF13-205ENST00000396545 C9orf131Q5VYM1 1079 aa22.81■■□□□ 1.24
TNFSF13-205ENST00000396545 ZNF790Q6PG37 636 aa22.81■■□□□ 1.24
TNFSF13-205ENST00000396545 ZNF496Q96IT1 587 aaPredicted RBP22.81■■□□□ 1.24
TNFSF13-205ENST00000396545 CEMIPQ8WUJ3 1361 aa22.8■■□□□ 1.24
TNFSF13-205ENST00000396545 CANXP27824 592 aaKnown RBP22.8■■□□□ 1.24
TNFSF13-205ENST00000396545 HEG1Q9ULI3 1381 aa22.8■■□□□ 1.24
TNFSF13-205ENST00000396545 EIF5P55010 431 aaKnown RBP22.8■■□□□ 1.24
TNFSF13-205ENST00000396545 ERICH6BQ5W0A0 696 aa22.8■■□□□ 1.24
TNFSF13-205ENST00000396545 RNF123Q5XPI4 1314 aa22.79■■□□□ 1.24
TNFSF13-205ENST00000396545 NGEFQ8N5V2 710 aa22.78■■□□□ 1.24
TNFSF13-205ENST00000396545 PHACTR3Q96KR7 559 aa22.78■■□□□ 1.24
TNFSF13-205ENST00000396545 RSPH6AQ9H0K4 717 aa22.78■■□□□ 1.24
TNFSF13-205ENST00000396545 SERPINB2P05120 415 aa22.77■■□□□ 1.24
TNFSF13-205ENST00000396545 NMRK2Q9NPI5 230 aa22.77■■□□□ 1.24
TNFSF13-205ENST00000396545 DLEC1Q9Y238 1755 aa22.77■■□□□ 1.23
TNFSF13-205ENST00000396545 PRKAR2BP31323 418 aa22.76■■□□□ 1.23
TNFSF13-205ENST00000396545 TEX13AQ9BXU3 409 aaPredicted RBP22.76■■□□□ 1.23
TNFSF13-205ENST00000396545 SCN7AQ01118 1682 aa22.76■■□□□ 1.23
TNFSF13-205ENST00000396545 A0A087WZG4 1122 aa22.76■■□□□ 1.23
TNFSF13-205ENST00000396545 TOMM70O94826 608 aa22.76■■□□□ 1.23
TNFSF13-205ENST00000396545 RNF181Q9P0P0 153 aa22.75■■□□□ 1.23
TNFSF13-205ENST00000396545 CARMIL3Q8ND23 1372 aa22.74■■□□□ 1.23
TNFSF13-205ENST00000396545 SBF1O95248 1867 aa22.74■■□□□ 1.23
TNFSF13-205ENST00000396545 FMNL2Q96PY5 1086 aa22.74■■□□□ 1.23
TNFSF13-205ENST00000396545 IL6STP40189 918 aaPredicted RBP22.72■■□□□ 1.23
TNFSF13-205ENST00000396545 TBC1D9BQ66K14 1250 aa22.72■■□□□ 1.23
TNFSF13-205ENST00000396545 BICDL1Q6ZP65 573 aa22.72■■□□□ 1.23
TNFSF13-205ENST00000396545 PNNQ9H307 717 aaKnown RBP22.72■■□□□ 1.23
TNFSF13-205ENST00000396545 BTBD11A6QL63 1104 aa22.71■■□□□ 1.23
TNFSF13-205ENST00000396545 KCNQ3O43525 872 aa22.71■■□□□ 1.23
TNFSF13-205ENST00000396545 KDM2BQ8NHM5 1336 aa22.7■■□□□ 1.22
TNFSF13-205ENST00000396545 C2CD5Q86YS7 1000 aa22.7■■□□□ 1.22
TNFSF13-205ENST00000396545 TTLL6Q8N841 843 aa22.7■■□□□ 1.22
TNFSF13-205ENST00000396545 TBC1D2BQ9UPU7 963 aa22.7■■□□□ 1.22
TNFSF13-205ENST00000396545 ZNF330Q9Y3S2 320 aaPredicted RBP22.7■■□□□ 1.22
TNFSF13-205ENST00000396545 ZNF521Q96K83 1311 aa22.69■■□□□ 1.22
TNFSF13-205ENST00000396545 A1BGP04217 495 aa22.69■■□□□ 1.22
TNFSF13-205ENST00000396545 U2AF1L5P0DN76 240 aaPredicted RBP22.69■■□□□ 1.22
TNFSF13-205ENST00000396545 APLP1P51693 650 aa22.69■■□□□ 1.22
TNFSF13-205ENST00000396545 U2AF1Q01081 240 aaKnown RBP eCLIP22.69■■□□□ 1.22
TNFSF13-205ENST00000396545 RASSF7Q02833 373 aa22.69■■□□□ 1.22
TNFSF13-205ENST00000396545 NCBP3Q53F19 620 aaKnown RBP22.69■■□□□ 1.22
TNFSF13-205ENST00000396545 ANKRD31Q8N7Z5 1873 aa22.69■■□□□ 1.22
TNFSF13-205ENST00000396545 H0YIN7 160 aa22.68■■□□□ 1.22
TNFSF13-205ENST00000396545 RBM46Q8TBY0 533 aaKnown RBP22.68■■□□□ 1.22
TNFSF13-205ENST00000396545 ZC3H4Q9UPT8 1303 aaKnown RBP22.68■■□□□ 1.22
TNFSF13-205ENST00000396545 SALL2Q9Y467 1007 aaPredicted RBP22.67■■□□□ 1.22
TNFSF13-205ENST00000396545 TNRC6CQ9HCJ0 1690 aaKnown RBP22.67■■□□□ 1.22
TNFSF13-205ENST00000396545 CAMTA2O94983 1202 aa22.67■■□□□ 1.22
TNFSF13-205ENST00000396545 PRELPP51888 382 aa22.67■■□□□ 1.22
TNFSF13-205ENST00000396545 RUNDC1Q96C34 613 aa22.67■■□□□ 1.22
TNFSF13-205ENST00000396545 LMNB1P20700 586 aa22.66■■□□□ 1.22
TNFSF13-205ENST00000396545 IRX6P78412 446 aaPredicted RBP22.66■■□□□ 1.22
TNFSF13-205ENST00000396545 PRR5LQ6MZQ0 368 aa22.66■■□□□ 1.22
TNFSF13-205ENST00000396545 MCM10Q7L590 875 aa22.66■■□□□ 1.22
TNFSF13-205ENST00000396545 BRIP1Q9BX63 1249 aa22.66■■□□□ 1.22
Retrieved 100 of 20,778 RNA–protein pairs in 46.8 ms