RNA–Protein interactions for RNA: ENST00000396464.7

GABPB1-204, Transcript of GA binding protein transcription factor subunit beta 1, humanhuman

TSL 1 (best) BASIC

Gene GABPB1, Length 1,401 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABPB1-204ENST00000396464 KRTAP4-6Q9BYQ5 205 aa7.52□□□□□ -1.21
GABPB1-204ENST00000396464 GDF2Q9UK05 429 aaPredicted RBP7.52□□□□□ -1.21
GABPB1-204ENST00000396464 PDE4CQ08493 712 aa7.51□□□□□ -1.21
GABPB1-204ENST00000396464 CCDC27Q2M243 656 aa7.51□□□□□ -1.21
GABPB1-204ENST00000396464 TBC1D9Q6ZT07 1266 aa7.51□□□□□ -1.21
GABPB1-204ENST00000396464 KLRG1Q96E93 195 aa7.51□□□□□ -1.21
GABPB1-204ENST00000396464 FHDC1Q9C0D6 1143 aaPredicted RBP7.51□□□□□ -1.21
GABPB1-204ENST00000396464 MKL2Q9ULH7 1088 aa7.51□□□□□ -1.21
GABPB1-204ENST00000396464 ATXN7L1Q9ULK2 861 aaPredicted RBP7.51□□□□□ -1.21
GABPB1-204ENST00000396464 ABL2P42684 1182 aa7.5□□□□□ -1.21
GABPB1-204ENST00000396464 VAC14Q08AM6 782 aa7.5□□□□□ -1.21
GABPB1-204ENST00000396464 PLA2G4EQ3MJ16 856 aa7.5□□□□□ -1.21
GABPB1-204ENST00000396464 PPARGC1BQ86YN6 1023 aaKnown RBP7.5□□□□□ -1.21
GABPB1-204ENST00000396464 GOLGA6L1Q8N7Z2 621 aa7.5□□□□□ -1.21
GABPB1-204ENST00000396464 ETNK1Q9HBU6 452 aa7.5□□□□□ -1.21
GABPB1-204ENST00000396464 HRH3Q9Y5N1 445 aa7.5□□□□□ -1.21
GABPB1-204ENST00000396464 BRD1O95696 1058 aa7.49□□□□□ -1.21
GABPB1-204ENST00000396464 PLA2G4AP47712 749 aa7.49□□□□□ -1.21
GABPB1-204ENST00000396464 SEMA3FQ13275 785 aa7.49□□□□□ -1.21
GABPB1-204ENST00000396464 TSGA10IPQ3SY00 556 aa7.49□□□□□ -1.21
GABPB1-204ENST00000396464 FIGNL1Q6PIW4 674 aa7.49□□□□□ -1.21
GABPB1-204ENST00000396464 EDARADDQ8WWZ3 215 aa7.49□□□□□ -1.21
GABPB1-204ENST00000396464 AIDAQ96BJ3 306 aa7.49□□□□□ -1.21
GABPB1-204ENST00000396464 COG6Q9Y2V7 657 aa7.49□□□□□ -1.21
GABPB1-204ENST00000396464 UNCXA6NJT0 531 aa7.48□□□□□ -1.21
GABPB1-204ENST00000396464 WASHC4Q2M389 1173 aa7.48□□□□□ -1.21
GABPB1-204ENST00000396464 ABHD17AQ96GS6 310 aa7.48□□□□□ -1.21
GABPB1-204ENST00000396464 PIK3R2O00459 728 aa7.47□□□□□ -1.21
GABPB1-204ENST00000396464 STAU1O95793 577 aaKnown RBP7.47□□□□□ -1.21
GABPB1-204ENST00000396464 FGFR3P22607 806 aa7.47□□□□□ -1.21
GABPB1-204ENST00000396464 MAP7D1Q3KQU3 841 aa7.47□□□□□ -1.21
GABPB1-204ENST00000396464 DHX37Q8IY37 1157 aaKnown RBP7.47□□□□□ -1.21
GABPB1-204ENST00000396464 PHTF2Q8N3S3 785 aa7.47□□□□□ -1.21
GABPB1-204ENST00000396464 NIFKQ9BYG3 293 aaKnown RBP7.47□□□□□ -1.21
GABPB1-204ENST00000396464 GDPD2Q9HCC8 539 aa7.47□□□□□ -1.21
GABPB1-204ENST00000396464 THBS1P07996 1170 aa7.46□□□□□ -1.21
GABPB1-204ENST00000396464 GDF10P55107 478 aa7.46□□□□□ -1.21
GABPB1-204ENST00000396464 ARSJQ5FYB0 599 aaPredicted RBP7.46□□□□□ -1.21
GABPB1-204ENST00000396464 C1orf216Q8TAB5 229 aa7.46□□□□□ -1.21
GABPB1-204ENST00000396464 SPOCK3Q9BQ16 436 aa7.46□□□□□ -1.21
GABPB1-204ENST00000396464 IGSF5Q9NSI5 407 aa7.46□□□□□ -1.21
GABPB1-204ENST00000396464 ACIN1Q9UKV3 1341 aaKnown RBP7.46□□□□□ -1.22
GABPB1-204ENST00000396464 SHISA8B8ZZ34 492 aa7.45□□□□□ -1.22
GABPB1-204ENST00000396464 INHAP05111 366 aa7.45□□□□□ -1.22
GABPB1-204ENST00000396464 SNRPNP63162 240 aaKnown RBP7.45□□□□□ -1.22
GABPB1-204ENST00000396464 NBPF1Q3BBV0 1214 aa7.45□□□□□ -1.22
GABPB1-204ENST00000396464 PLPP7Q8NBV4 271 aa7.45□□□□□ -1.22
GABPB1-204ENST00000396464 CRISPLD1Q9H336 500 aa7.45□□□□□ -1.22
GABPB1-204ENST00000396464 GJA3Q9Y6H8 435 aa7.45□□□□□ -1.22
GABPB1-204ENST00000396464 BNIP3LO60238 219 aa7.44□□□□□ -1.22
GABPB1-204ENST00000396464 TATP17735 454 aaPredicted RBP7.44□□□□□ -1.22
GABPB1-204ENST00000396464 SOX11P35716 441 aa7.44□□□□□ -1.22
GABPB1-204ENST00000396464 ALYREFQ86V81 257 aaKnown RBP7.44□□□□□ -1.22
GABPB1-204ENST00000396464 POLR3GLQ9BT43 218 aa7.44□□□□□ -1.22
GABPB1-204ENST00000396464 SERTAD1Q9UHV2 236 aa7.44□□□□□ -1.22
GABPB1-204ENST00000396464 GGA1Q9UJY5 639 aa7.44□□□□□ -1.22
GABPB1-204ENST00000396464 PCDHGC4Q9Y5F7 938 aa7.44□□□□□ -1.22
GABPB1-204ENST00000396464 SLCO4C1Q6ZQN7 724 aa7.44□□□□□ -1.22
GABPB1-204ENST00000396464 SND1Q7KZF4 910 aaKnown RBP eCLIP7.44□□□□□ -1.22
GABPB1-204ENST00000396464 ATXN7O15265 892 aaPredicted RBP7.43□□□□□ -1.22
GABPB1-204ENST00000396464 PPM1GO15355 546 aaPredicted RBP7.43□□□□□ -1.22
GABPB1-204ENST00000396464 SMTNP53814 917 aa7.43□□□□□ -1.22
GABPB1-204ENST00000396464 CTBSQ01459 385 aa7.43□□□□□ -1.22
GABPB1-204ENST00000396464 UBAP2LQ14157 1087 aaKnown RBP7.43□□□□□ -1.22
GABPB1-204ENST00000396464 GRIN2CQ14957 1233 aa7.43□□□□□ -1.22
GABPB1-204ENST00000396464 NLRP8Q86W28 1048 aa7.43□□□□□ -1.22
GABPB1-204ENST00000396464 WWC1Q8IX03 1113 aa7.43□□□□□ -1.22
GABPB1-204ENST00000396464 ZCCHC2Q9C0B9 1178 aaKnown RBP7.43□□□□□ -1.22
GABPB1-204ENST00000396464 USTQ9Y2C2 406 aa7.43□□□□□ -1.22
GABPB1-204ENST00000396464 IVNS1ABPQ9Y6Y0 642 aa7.43□□□□□ -1.22
GABPB1-204ENST00000396464 SCNN1DP51172 638 aa7.42□□□□□ -1.22
GABPB1-204ENST00000396464 C1orf229Q6ZS94 237 aaPredicted RBP7.42□□□□□ -1.22
GABPB1-204ENST00000396464 CHIC2Q9UKJ5 165 aa7.42□□□□□ -1.22
GABPB1-204ENST00000396464 NEURL1BA8MQ27 555 aa7.41□□□□□ -1.22
GABPB1-204ENST00000396464 C2CD2LO14523 706 aa7.41□□□□□ -1.22
GABPB1-204ENST00000396464 ARAFP10398 606 aa7.41□□□□□ -1.22
GABPB1-204ENST00000396464 PSME1Q06323 249 aa7.41□□□□□ -1.22
GABPB1-204ENST00000396464 BICDL1Q6ZP65 573 aa7.41□□□□□ -1.22
GABPB1-204ENST00000396464 CABP1Q9NZU7 370 aa7.41□□□□□ -1.22
GABPB1-204ENST00000396464 A0A1W2PNR3 127 aa7.4□□□□□ -1.22
GABPB1-204ENST00000396464 DCDC2BA2VCK2 349 aa7.4□□□□□ -1.22
GABPB1-204ENST00000396464 GNB5O14775 395 aa7.4□□□□□ -1.22
GABPB1-204ENST00000396464 KHNYNO15037 678 aaKnown RBP7.4□□□□□ -1.22
GABPB1-204ENST00000396464 EML3Q32P44 896 aa7.4□□□□□ -1.22
GABPB1-204ENST00000396464 NDFIP2Q9NV92 336 aa7.4□□□□□ -1.22
GABPB1-204ENST00000396464 NOP53Q9NZM5 478 aaKnown RBP7.4□□□□□ -1.22
GABPB1-204ENST00000396464 PRR12Q9ULL5 1215 aa7.4□□□□□ -1.22
GABPB1-204ENST00000396464 A6NJY4 79 aa7.39□□□□□ -1.23
GABPB1-204ENST00000396464 BACH1O14867 736 aa7.39□□□□□ -1.23
GABPB1-204ENST00000396464 ADAM23O75077 832 aa7.39□□□□□ -1.23
GABPB1-204ENST00000396464 EPXP11678 715 aa7.39□□□□□ -1.23
GABPB1-204ENST00000396464 ATP4AP20648 1035 aa7.39□□□□□ -1.23
GABPB1-204ENST00000396464 BRD2P25440 801 aaKnown RBP7.39□□□□□ -1.23
GABPB1-204ENST00000396464 ADH6P28332 368 aa7.39□□□□□ -1.23
GABPB1-204ENST00000396464 BTBD6Q96KE9 485 aa7.39□□□□□ -1.23
GABPB1-204ENST00000396464 CALR3Q96L12 384 aaKnown RBP7.39□□□□□ -1.23
GABPB1-204ENST00000396464 NOD1Q9Y239 953 aa7.39□□□□□ -1.23
GABPB1-204ENST00000396464 KRBA1A5PL33 1030 aa7.38□□□□□ -1.23
GABPB1-204ENST00000396464 CDK2AP1O14519 115 aa7.38□□□□□ -1.23
GABPB1-204ENST00000396464 PROCP04070 461 aa7.38□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms