RNA–Protein interactions for RNA: ENST00000395823.2

HMGB1P10-201, Transcript of high mobility group box 1 pseudogene 10, humanhuman

BASIC

Gene HMGB1P10, Length 563 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P10-201ENST00000395823 PKD2L1Q9P0L9 805 aa8.25□□□□□ -1.09
HMGB1P10-201ENST00000395823 ZBTB39O15060 712 aa8.24□□□□□ -1.09
HMGB1P10-201ENST00000395823 ALDH1A1P00352 501 aa8.24□□□□□ -1.09
HMGB1P10-201ENST00000395823 VAMP1P23763 118 aa8.24□□□□□ -1.09
HMGB1P10-201ENST00000395823 HIRAP54198 1017 aaPredicted RBP8.24□□□□□ -1.09
HMGB1P10-201ENST00000395823 ZNF326Q5BKZ1 582 aaKnown RBP8.24□□□□□ -1.09
HMGB1P10-201ENST00000395823 Q6ZVU0 165 aa8.24□□□□□ -1.09
HMGB1P10-201ENST00000395823 ITPKCQ96DU7 683 aa8.24□□□□□ -1.09
HMGB1P10-201ENST00000395823 STIM2Q9P246 746 aa8.24□□□□□ -1.09
HMGB1P10-201ENST00000395823 TREHO43280 583 aa8.23□□□□□ -1.09
HMGB1P10-201ENST00000395823 FMR1Q06787 632 aaKnown RBP eCLIP8.23□□□□□ -1.09
HMGB1P10-201ENST00000395823 AGBL1Q96MI9 1066 aa8.23□□□□□ -1.09
HMGB1P10-201ENST00000395823 NDUFB5O43674 189 aa8.22□□□□□ -1.09
HMGB1P10-201ENST00000395823 RECKO95980 971 aa8.22□□□□□ -1.09
HMGB1P10-201ENST00000395823 PTGIRP43119 386 aa8.22□□□□□ -1.09
HMGB1P10-201ENST00000395823 CENPCQ03188 943 aa8.22□□□□□ -1.09
HMGB1P10-201ENST00000395823 DSC3Q14574 896 aa8.22□□□□□ -1.09
HMGB1P10-201ENST00000395823 TEAD4Q15561 434 aa8.22□□□□□ -1.09
HMGB1P10-201ENST00000395823 ZFAND3Q9H8U3 227 aa8.22□□□□□ -1.09
HMGB1P10-201ENST00000395823 BRPF3Q9ULD4 1205 aa8.22□□□□□ -1.09
HMGB1P10-201ENST00000395823 EAPPQ56P03 285 aaPredicted RBP8.21□□□□□ -1.1
HMGB1P10-201ENST00000395823 ZNF697Q5TEC3 545 aa8.21□□□□□ -1.1
HMGB1P10-201ENST00000395823 IFFO2Q5TF58 517 aa8.21□□□□□ -1.1
HMGB1P10-201ENST00000395823 ATCAYQ86WG3 371 aa8.21□□□□□ -1.1
HMGB1P10-201ENST00000395823 UTP3Q9NQZ2 479 aaKnown RBP eCLIP8.21□□□□□ -1.1
HMGB1P10-201ENST00000395823 SERTM1A2A2V5 107 aa8.2□□□□□ -1.1
HMGB1P10-201ENST00000395823 GPR182O15218 404 aa8.2□□□□□ -1.1
HMGB1P10-201ENST00000395823 ZIC2O95409 532 aaPredicted RBP8.2□□□□□ -1.1
HMGB1P10-201ENST00000395823 TCF3P15923 654 aa8.2□□□□□ -1.1
HMGB1P10-201ENST00000395823 NOS2P35228 1153 aa8.2□□□□□ -1.1
HMGB1P10-201ENST00000395823 FOXC1Q12948 553 aa8.2□□□□□ -1.1
HMGB1P10-201ENST00000395823 ETFBKMTQ8IXQ9 262 aa8.2□□□□□ -1.1
HMGB1P10-201ENST00000395823 NBPF15Q8N660 670 aa8.2□□□□□ -1.1
HMGB1P10-201ENST00000395823 NGLY1Q96IV0 654 aa8.2□□□□□ -1.1
HMGB1P10-201ENST00000395823 FAM129BQ96TA1 746 aa8.2□□□□□ -1.1
HMGB1P10-201ENST00000395823 PARP3Q9Y6F1 533 aa8.2□□□□□ -1.1
HMGB1P10-201ENST00000395823 J3QL48 77 aa8.19□□□□□ -1.1
HMGB1P10-201ENST00000395823 MEN1O00255 615 aa8.19□□□□□ -1.1
HMGB1P10-201ENST00000395823 TIMP2P16035 220 aa8.19□□□□□ -1.1
HMGB1P10-201ENST00000395823 ALKBH2Q6NS38 261 aa8.19□□□□□ -1.1
HMGB1P10-201ENST00000395823 ZNF598Q86UK7 904 aaKnown RBP8.19□□□□□ -1.1
HMGB1P10-201ENST00000395823 PPARGC1BQ86YN6 1023 aaKnown RBP8.19□□□□□ -1.1
HMGB1P10-201ENST00000395823 ALDH16A1Q8IZ83 802 aa8.19□□□□□ -1.1
HMGB1P10-201ENST00000395823 L3MBTL2Q969R5 705 aa8.19□□□□□ -1.1
HMGB1P10-201ENST00000395823 CITED4Q96RK1 184 aa8.19□□□□□ -1.1
HMGB1P10-201ENST00000395823 HCN4Q9Y3Q4 1203 aa8.19□□□□□ -1.1
HMGB1P10-201ENST00000395823 WASF2Q9Y6W5 498 aa8.19□□□□□ -1.1
HMGB1P10-201ENST00000395823 RELBQ01201 579 aa8.18□□□□□ -1.1
HMGB1P10-201ENST00000395823 MRPL58Q14197 206 aaKnown RBP8.18□□□□□ -1.1
HMGB1P10-201ENST00000395823 RTN1Q16799 776 aa8.18□□□□□ -1.1
HMGB1P10-201ENST00000395823 SNIP1Q8TAD8 396 aaKnown RBP8.18□□□□□ -1.1
HMGB1P10-201ENST00000395823 PRKD2Q9BZL6 878 aa8.18□□□□□ -1.1
HMGB1P10-201ENST00000395823 KLK14Q9P0G3 267 aa8.18□□□□□ -1.1
HMGB1P10-201ENST00000395823 ZNF232Q9UNY5 417 aa8.18□□□□□ -1.1
HMGB1P10-201ENST00000395823 LOC105371045A0A1W2PR82 267 aa8.17□□□□□ -1.1
HMGB1P10-201ENST00000395823 WDR4P57081 412 aaKnown RBP8.17□□□□□ -1.1
HMGB1P10-201ENST00000395823 DGKZQ13574 1117 aa8.17□□□□□ -1.1
HMGB1P10-201ENST00000395823 LDLRAD1Q5T700 205 aa8.17□□□□□ -1.1
HMGB1P10-201ENST00000395823 ABTB2Q8N961 1025 aa8.17□□□□□ -1.1
HMGB1P10-201ENST00000395823 PHACTR1Q9C0D0 580 aa8.17□□□□□ -1.1
HMGB1P10-201ENST00000395823 ZNF395Q9H8N7 513 aaPredicted RBP8.17□□□□□ -1.1
HMGB1P10-201ENST00000395823 RNF19AQ9NV58 838 aa8.17□□□□□ -1.1
HMGB1P10-201ENST00000395823 CABP1Q9NZU7 370 aa8.17□□□□□ -1.1
HMGB1P10-201ENST00000395823 CHMP3Q9Y3E7 222 aa8.17□□□□□ -1.1
HMGB1P10-201ENST00000395823 BRD2P25440 801 aaKnown RBP8.16□□□□□ -1.1
HMGB1P10-201ENST00000395823 EHHADHQ08426 723 aa8.16□□□□□ -1.1
HMGB1P10-201ENST00000395823 GJD3Q8N144 294 aa8.16□□□□□ -1.1
HMGB1P10-201ENST00000395823 SETDB2Q96T68 719 aa8.16□□□□□ -1.1
HMGB1P10-201ENST00000395823 GDF9O60383 454 aa8.15□□□□□ -1.1
HMGB1P10-201ENST00000395823 TXLNAP40222 546 aa8.15□□□□□ -1.1
HMGB1P10-201ENST00000395823 AAMPQ13685 434 aa8.15□□□□□ -1.1
HMGB1P10-201ENST00000395823 C11orf91Q3C1V1 193 aa8.15□□□□□ -1.1
HMGB1P10-201ENST00000395823 MEIOBQ8N635 442 aa8.15□□□□□ -1.1
HMGB1P10-201ENST00000395823 TMC1Q8TDI8 760 aa8.15□□□□□ -1.1
HMGB1P10-201ENST00000395823 C7orf43Q8WVR3 580 aa8.15□□□□□ -1.1
HMGB1P10-201ENST00000395823 ALKBH8Q96BT7 664 aaKnown RBP8.15□□□□□ -1.1
HMGB1P10-201ENST00000395823 KLRG1Q96E93 195 aa8.15□□□□□ -1.1
HMGB1P10-201ENST00000395823 DMRTB1Q96MA1 342 aa8.15□□□□□ -1.1
HMGB1P10-201ENST00000395823 NLRP3Q96P20 1036 aa8.15□□□□□ -1.1
HMGB1P10-201ENST00000395823 ZSCAN10Q96SZ4 725 aaPredicted RBP8.15□□□□□ -1.1
HMGB1P10-201ENST00000395823 POLIQ9UNA4 740 aa8.15□□□□□ -1.1
HMGB1P10-201ENST00000395823 BCS1LQ9Y276 419 aa8.15□□□□□ -1.1
HMGB1P10-201ENST00000395823 PDGFAP04085 211 aa8.14□□□□□ -1.11
HMGB1P10-201ENST00000395823 LDHBP07195 334 aaKnown RBP8.14□□□□□ -1.11
HMGB1P10-201ENST00000395823 SMPD1P17405 629 aa8.14□□□□□ -1.11
HMGB1P10-201ENST00000395823 PLCB3Q01970 1234 aa8.14□□□□□ -1.11
HMGB1P10-201ENST00000395823 IFT43Q96FT9 208 aa8.14□□□□□ -1.11
HMGB1P10-201ENST00000395823 NIFKQ9BYG3 293 aaKnown RBP8.14□□□□□ -1.11
HMGB1P10-201ENST00000395823 GRIP2Q9C0E4 1043 aa8.14□□□□□ -1.11
HMGB1P10-201ENST00000395823 TOR4AQ9NXH8 423 aa8.14□□□□□ -1.11
HMGB1P10-201ENST00000395823 WWC3Q9ULE0 1092 aa8.14□□□□□ -1.11
HMGB1P10-201ENST00000395823 A0A0G2JS52 829 aa8.13□□□□□ -1.11
HMGB1P10-201ENST00000395823 PRPF40AO75400 957 aaKnown RBP8.13□□□□□ -1.11
HMGB1P10-201ENST00000395823 MZF1P28698 734 aaPredicted RBP8.13□□□□□ -1.11
HMGB1P10-201ENST00000395823 ZAP70P43403 619 aa8.13□□□□□ -1.11
HMGB1P10-201ENST00000395823 MAPK8P45983 427 aa8.13□□□□□ -1.11
HMGB1P10-201ENST00000395823 TSNAXIP1Q2TAA8 658 aa8.13□□□□□ -1.11
HMGB1P10-201ENST00000395823 C1orf53Q5VUE5 145 aa8.13□□□□□ -1.11
HMGB1P10-201ENST00000395823 RHBDD1Q8TEB9 315 aa8.13□□□□□ -1.11
HMGB1P10-201ENST00000395823 EDEM1Q92611 657 aa8.13□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms