RNA–Protein interactions for RNA: ENST00000395756.5

SREBF1-204, Transcript of sterol regulatory element binding transcription factor 1, humanhuman

TSL 2

Gene SREBF1, Length 3,026 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREBF1-204ENST00000395756 SLC52A2Q9HAB3 445 aa22■■□□□ 1.11
SREBF1-204ENST00000395756 ADCY9O60503 1353 aa22■■□□□ 1.11
SREBF1-204ENST00000395756 SPATA31A3Q5VYP0 1347 aa22■■□□□ 1.11
SREBF1-204ENST00000395756 HOXB7P09629 217 aa22■■□□□ 1.11
SREBF1-204ENST00000395756 GSE1Q14687 1217 aa22■■□□□ 1.11
SREBF1-204ENST00000395756 IFNL2Q8IZJ0 200 aa22■■□□□ 1.11
SREBF1-204ENST00000395756 ARXQ96QS3 562 aa21.99■■□□□ 1.11
SREBF1-204ENST00000395756 SLAIN2Q9P270 581 aa21.99■■□□□ 1.11
SREBF1-204ENST00000395756 USP16Q9Y5T5 823 aa21.99■■□□□ 1.11
SREBF1-204ENST00000395756 SLIT3O75094 1523 aa21.99■■□□□ 1.11
SREBF1-204ENST00000395756 RIC3Q7Z5B4 369 aa21.99■■□□□ 1.11
SREBF1-204ENST00000395756 UNC5CLQ8IV45 518 aa21.99■■□□□ 1.11
SREBF1-204ENST00000395756 PA2G4Q9UQ80 394 aaKnown RBP21.99■■□□□ 1.11
SREBF1-204ENST00000395756 TTC5Q8N0Z6 440 aa21.98■■□□□ 1.11
SREBF1-204ENST00000395756 USP26Q9BXU7 913 aa21.98■■□□□ 1.11
SREBF1-204ENST00000395756 DDX54Q8TDD1 881 aaKnown RBP21.98■■□□□ 1.11
SREBF1-204ENST00000395756 MED1Q15648 1581 aaPredicted RBP21.98■■□□□ 1.11
SREBF1-204ENST00000395756 LRRC37A3O60309 1634 aa21.98■■□□□ 1.11
SREBF1-204ENST00000395756 KSR2Q6VAB6 950 aa21.98■■□□□ 1.11
SREBF1-204ENST00000395756 SSH3Q8TE77 659 aa21.97■■□□□ 1.11
SREBF1-204ENST00000395756 IBTKQ9P2D0 1353 aaPredicted RBP21.97■■□□□ 1.11
SREBF1-204ENST00000395756 CABP4P57796 275 aa21.96■■□□□ 1.11
SREBF1-204ENST00000395756 USP54Q70EL1 1684 aa21.96■■□□□ 1.11
SREBF1-204ENST00000395756 COPS6Q7L5N1 327 aa21.96■■□□□ 1.11
SREBF1-204ENST00000395756 RHPN1Q8TCX5 695 aa21.96■■□□□ 1.11
SREBF1-204ENST00000395756 KDM4FA0A1W2PPD8 638 aa21.96■■□□□ 1.11
SREBF1-204ENST00000395756 CHMP5Q9NZZ3 219 aa21.96■■□□□ 1.11
SREBF1-204ENST00000395756 XAGE3Q8WTP9 111 aa21.95■■□□□ 1.1
SREBF1-204ENST00000395756 CHMP4AQ9BY43 222 aa21.95■■□□□ 1.1
SREBF1-204ENST00000395756 MEGF6O75095 1541 aa21.95■■□□□ 1.1
SREBF1-204ENST00000395756 GZF1Q9H116 711 aaPredicted RBP21.95■■□□□ 1.1
SREBF1-204ENST00000395756 HYPKQ9NX55 129 aa21.94■■□□□ 1.1
SREBF1-204ENST00000395756 PDIA6Q15084 440 aa21.94■■□□□ 1.1
SREBF1-204ENST00000395756 DDX21Q9NR30 783 aaKnown RBP eCLIP21.94■■□□□ 1.1
SREBF1-204ENST00000395756 ERC2O15083 957 aa21.93■■□□□ 1.1
SREBF1-204ENST00000395756 SIL1Q9H173 461 aa21.93■■□□□ 1.1
SREBF1-204ENST00000395756 TNS3Q68CZ2 1445 aa21.93■■□□□ 1.1
SREBF1-204ENST00000395756 RGPD5Q99666 1765 aa21.93■■□□□ 1.1
SREBF1-204ENST00000395756 ANO2Q9NQ90 1003 aa21.93■■□□□ 1.1
SREBF1-204ENST00000395756 GLIPR1L2Q4G1C9 344 aa21.93■■□□□ 1.1
SREBF1-204ENST00000395756 SNX21Q969T3 373 aa21.93■■□□□ 1.1
SREBF1-204ENST00000395756 K7ELQ4 463 aaPredicted RBP21.92■■□□□ 1.1
SREBF1-204ENST00000395756 PTCD1O75127 700 aaKnown RBP21.92■■□□□ 1.1
SREBF1-204ENST00000395756 EVA1CP58658 441 aa21.92■■□□□ 1.1
SREBF1-204ENST00000395756 KLHDC4Q8TBB5 520 aa21.92■■□□□ 1.1
SREBF1-204ENST00000395756 MYD88Q99836 296 aa21.92■■□□□ 1.1
SREBF1-204ENST00000395756 OSBPL3Q9H4L5 887 aa21.92■■□□□ 1.1
SREBF1-204ENST00000395756 KDM6AO15550 1401 aaPredicted RBP21.92■■□□□ 1.1
SREBF1-204ENST00000395756 DDX58O95786 925 aaKnown RBP21.92■■□□□ 1.1
SREBF1-204ENST00000395756 NOL8Q76FK4 1167 aaKnown RBP21.92■■□□□ 1.1
SREBF1-204ENST00000395756 STRCP1A6NGW2 1772 aa21.92■■□□□ 1.1
SREBF1-204ENST00000395756 TRPM3Q9HCF6 1732 aaPredicted RBP21.91■■□□□ 1.1
SREBF1-204ENST00000395756 FAM208AQ9UK61 1670 aaKnown RBP21.91■■□□□ 1.1
SREBF1-204ENST00000395756 ATP5J2-PTCD1G3V325 749 aa21.91■■□□□ 1.1
SREBF1-204ENST00000395756 REC8O95072 547 aa21.91■■□□□ 1.1
SREBF1-204ENST00000395756 DCAF5Q96JK2 942 aa21.91■■□□□ 1.1
SREBF1-204ENST00000395756 POLA2Q14181 598 aa21.9■■□□□ 1.1
SREBF1-204ENST00000395756 SUCLG2Q96I99 432 aa21.9■■□□□ 1.1
SREBF1-204ENST00000395756 SALL3Q9BXA9 1300 aa21.89■■□□□ 1.1
SREBF1-204ENST00000395756 KIF1BPQ96EK5 621 aa21.89■■□□□ 1.1
SREBF1-204ENST00000395756 BICC1Q9H694 974 aaKnown RBP21.89■■□□□ 1.1
SREBF1-204ENST00000395756 ZNF330Q9Y3S2 320 aaPredicted RBP21.89■■□□□ 1.1
SREBF1-204ENST00000395756 GRM8O00222 908 aa21.89■■□□□ 1.09
SREBF1-204ENST00000395756 IGKV5-2P06315 115 aa21.88■■□□□ 1.09
SREBF1-204ENST00000395756 NCAPD2Q15021 1401 aa21.88■■□□□ 1.09
SREBF1-204ENST00000395756 SNRPA1P09661 255 aaKnown RBP21.88■■□□□ 1.09
SREBF1-204ENST00000395756 LARP1Q6PKG0 1096 aaKnown RBP21.88■■□□□ 1.09
SREBF1-204ENST00000395756 LINS1Q8NG48 757 aa21.88■■□□□ 1.09
SREBF1-204ENST00000395756 IL25Q9H293 177 aa21.88■■□□□ 1.09
SREBF1-204ENST00000395756 CHMLP26374 656 aa21.88■■□□□ 1.09
SREBF1-204ENST00000395756 MCM4P33991 863 aa21.87■■□□□ 1.09
SREBF1-204ENST00000395756 NEXNQ0ZGT2 675 aa21.87■■□□□ 1.09
SREBF1-204ENST00000395756 ZCRB1Q8TBF4 217 aaKnown RBP21.87■■□□□ 1.09
SREBF1-204ENST00000395756 ESYT1Q9BSJ8 1104 aa21.87■■□□□ 1.09
SREBF1-204ENST00000395756 RAB11FIP3O75154 756 aa21.87■■□□□ 1.09
SREBF1-204ENST00000395756 HEG1Q9ULI3 1381 aa21.86■■□□□ 1.09
SREBF1-204ENST00000395756 A0A0U1RQG5 324 aaPredicted RBP21.86■■□□□ 1.09
SREBF1-204ENST00000395756 RABEP1Q15276 862 aa21.86■■□□□ 1.09
SREBF1-204ENST00000395756 ANKRD13DQ6ZTN6 518 aa21.86■■□□□ 1.09
SREBF1-204ENST00000395756 FMNL2Q96PY5 1086 aa21.86■■□□□ 1.09
SREBF1-204ENST00000395756 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP21.86■■□□□ 1.09
SREBF1-204ENST00000395756 ALDH1L1O75891 902 aa21.85■■□□□ 1.09
SREBF1-204ENST00000395756 KAZALD1Q96I82 304 aa21.85■■□□□ 1.09
SREBF1-204ENST00000395756 NEK4P51957 841 aa21.85■■□□□ 1.09
SREBF1-204ENST00000395756 CLASRPQ8N2M8 674 aaKnown RBP21.85■■□□□ 1.09
SREBF1-204ENST00000395756 CCDC8Q9H0W5 538 aaPredicted RBP21.85■■□□□ 1.09
SREBF1-204ENST00000395756 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP21.85■■□□□ 1.09
SREBF1-204ENST00000395756 PALD1Q9ULE6 856 aa21.85■■□□□ 1.09
SREBF1-204ENST00000395756 KIF1AQ12756 1690 aa21.85■■□□□ 1.09
SREBF1-204ENST00000395756 DCCP43146 1447 aa21.84■■□□□ 1.09
SREBF1-204ENST00000395756 TNPO1Q92973 898 aaKnown RBP21.84■■□□□ 1.09
SREBF1-204ENST00000395756 STAP2Q9UGK3 403 aa21.84■■□□□ 1.09
SREBF1-204ENST00000395756 CCDC9Q9Y3X0 531 aaKnown RBP21.84■■□□□ 1.09
SREBF1-204ENST00000395756 PXDNLA1KZ92 1463 aa21.83■■□□□ 1.09
SREBF1-204ENST00000395756 EPHA10Q5JZY3 1008 aa21.83■■□□□ 1.08
SREBF1-204ENST00000395756 CWC27Q6UX04 472 aaKnown RBP21.83■■□□□ 1.08
SREBF1-204ENST00000395756 AACSQ86V21 672 aa21.83■■□□□ 1.08
SREBF1-204ENST00000395756 IFIT2P09913 472 aaKnown RBP21.82■■□□□ 1.08
SREBF1-204ENST00000395756 NEURL1BA8MQ27 555 aa21.82■■□□□ 1.08
SREBF1-204ENST00000395756 A1BGP04217 495 aa21.82■■□□□ 1.08
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms