RNA–Protein interactions for RNA: ENST00000395727.6

PTPN20-208, Transcript of protein tyrosine phosphatase, non-receptor type 20, humanhuman

TSL 1 (best) BASIC

Gene PTPN20, Length 790 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN20-208ENST00000395727 TRIM26Q12899 539 aaPredicted RBP8.76□□□□□ -1.01
PTPN20-208ENST00000395727 CABLES1Q8TDN4 633 aa8.76□□□□□ -1.01
PTPN20-208ENST00000395727 USP6P35125 1406 aa8.76□□□□□ -1.01
PTPN20-208ENST00000395727 AKAP12Q02952 1782 aa8.76□□□□□ -1.01
PTPN20-208ENST00000395727 USP54Q70EL1 1684 aa8.75□□□□□ -1.01
PTPN20-208ENST00000395727 GCGRP47871 477 aa8.75□□□□□ -1.01
PTPN20-208ENST00000395727 PTPN5P54829 565 aa8.75□□□□□ -1.01
PTPN20-208ENST00000395727 NBPF8Q3BBV2 869 aa8.75□□□□□ -1.01
PTPN20-208ENST00000395727 NYAP1Q6ZVC0 841 aa8.75□□□□□ -1.01
PTPN20-208ENST00000395727 CCDC125Q86Z20 511 aa8.75□□□□□ -1.01
PTPN20-208ENST00000395727 RDH13Q8NBN7 331 aa8.75□□□□□ -1.01
PTPN20-208ENST00000395727 EVC2Q86UK5 1308 aa8.75□□□□□ -1.01
PTPN20-208ENST00000395727 FAM83GA6ND36 823 aa8.74□□□□□ -1.01
PTPN20-208ENST00000395727 CFHP08603 1231 aa8.74□□□□□ -1.01
PTPN20-208ENST00000395727 APLP1P51693 650 aa8.74□□□□□ -1.01
PTPN20-208ENST00000395727 HCSTQ9UBK5 93 aa8.74□□□□□ -1.01
PTPN20-208ENST00000395727 BRWD3Q6RI45 1802 aa8.74□□□□□ -1.01
PTPN20-208ENST00000395727 PIK3C2AO00443 1686 aa8.74□□□□□ -1.01
PTPN20-208ENST00000395727 ABCC6O95255 1503 aa8.74□□□□□ -1.01
PTPN20-208ENST00000395727 MON2Q7Z3U7 1717 aa8.74□□□□□ -1.01
PTPN20-208ENST00000395727 TONSLQ96HA7 1378 aa8.73□□□□□ -1.01
PTPN20-208ENST00000395727 BLMP54132 1417 aaPredicted RBP8.73□□□□□ -1.01
PTPN20-208ENST00000395727 CPSF1Q10570 1443 aaKnown RBP8.73□□□□□ -1.01
PTPN20-208ENST00000395727 SRPK2P78362 688 aaKnown RBP8.73□□□□□ -1.01
PTPN20-208ENST00000395727 BEGAINQ9BUH8 593 aa8.73□□□□□ -1.01
PTPN20-208ENST00000395727 KIAA0232Q92628 1395 aa8.73□□□□□ -1.01
PTPN20-208ENST00000395727 NEUROD1Q13562 356 aa8.72□□□□□ -1.01
PTPN20-208ENST00000395727 PUS7Q96PZ0 661 aaKnown RBP8.72□□□□□ -1.01
PTPN20-208ENST00000395727 PRR14Q9BWN1 585 aa8.72□□□□□ -1.01
PTPN20-208ENST00000395727 FAM117AQ9C073 453 aa8.72□□□□□ -1.01
PTPN20-208ENST00000395727 PRDM11Q9NQV5 511 aa8.72□□□□□ -1.01
PTPN20-208ENST00000395727 BTG4Q9NY30 223 aa8.72□□□□□ -1.01
PTPN20-208ENST00000395727 SPATA31A5Q5VU36 1347 aa8.72□□□□□ -1.01
PTPN20-208ENST00000395727 SPATA31A7Q8IWB4 1347 aa8.72□□□□□ -1.01
PTPN20-208ENST00000395727 ACTN4O43707 911 aaKnown RBP8.71□□□□□ -1.02
PTPN20-208ENST00000395727 KMT5BQ4FZB7 885 aa8.71□□□□□ -1.02
PTPN20-208ENST00000395727 NLRP13Q86W25 1043 aa8.71□□□□□ -1.02
PTPN20-208ENST00000395727 TTC21AQ8NDW8 1320 aa8.71□□□□□ -1.02
PTPN20-208ENST00000395727 CLSPNQ9HAW4 1339 aa8.71□□□□□ -1.02
PTPN20-208ENST00000395727 CAMTA1Q9Y6Y1 1673 aa8.71□□□□□ -1.02
PTPN20-208ENST00000395727 SEPT12Q8IYM1 358 aa8.7□□□□□ -1.02
PTPN20-208ENST00000395727 ABTB2Q8N961 1025 aa8.7□□□□□ -1.02
PTPN20-208ENST00000395727 CABP1Q9NZU7 370 aa8.7□□□□□ -1.02
PTPN20-208ENST00000395727 COL5A2P05997 1499 aaPredicted RBP8.7□□□□□ -1.02
PTPN20-208ENST00000395727 CD163L1Q9NR16 1453 aa8.7□□□□□ -1.02
PTPN20-208ENST00000395727 RGPD1P0DJD0 1748 aa8.69□□□□□ -1.02
PTPN20-208ENST00000395727 PARP4Q9UKK3 1724 aaKnown RBP8.69□□□□□ -1.02
PTPN20-208ENST00000395727 COL18A1P39060 1754 aa8.69□□□□□ -1.02
PTPN20-208ENST00000395727 KDM4AO75164 1064 aa8.69□□□□□ -1.02
PTPN20-208ENST00000395727 DDRGK1Q96HY6 314 aa8.69□□□□□ -1.02
PTPN20-208ENST00000395727 CARD11Q9BXL7 1154 aa8.69□□□□□ -1.02
PTPN20-208ENST00000395727 SPATA31A1Q5TZJ5 1347 aa8.69□□□□□ -1.02
PTPN20-208ENST00000395727 AATKQ6ZMQ8 1374 aa8.69□□□□□ -1.02
PTPN20-208ENST00000395727 NINLQ9Y2I6 1382 aa8.69□□□□□ -1.02
PTPN20-208ENST00000395727 DISP2A7MBM2 1401 aa8.69□□□□□ -1.02
PTPN20-208ENST00000395727 NFAT5O94916 1531 aa8.69□□□□□ -1.02
PTPN20-208ENST00000395727 GCP02774 474 aa8.68□□□□□ -1.02
PTPN20-208ENST00000395727 FUT2Q10981 343 aa8.68□□□□□ -1.02
PTPN20-208ENST00000395727 KRT27Q7Z3Y8 459 aa8.68□□□□□ -1.02
PTPN20-208ENST00000395727 SPIRE2Q8WWL2 714 aa8.68□□□□□ -1.02
PTPN20-208ENST00000395727 TIMELESSQ9UNS1 1208 aa8.68□□□□□ -1.02
PTPN20-208ENST00000395727 USP31Q70CQ4 1352 aa8.68□□□□□ -1.02
PTPN20-208ENST00000395727 TNS1Q9HBL0 1735 aaKnown RBP8.68□□□□□ -1.02
PTPN20-208ENST00000395727 USP46P62068 366 aa8.67□□□□□ -1.02
PTPN20-208ENST00000395727 CRB1P82279 1406 aa8.67□□□□□ -1.02
PTPN20-208ENST00000395727 EDC4Q6P2E9 1401 aaKnown RBP8.67□□□□□ -1.02
PTPN20-208ENST00000395727 TTC21BQ7Z4L5 1316 aa8.67□□□□□ -1.02
PTPN20-208ENST00000395727 WNK3Q9BYP7 1800 aa8.67□□□□□ -1.02
PTPN20-208ENST00000395727 THRAP3Q9Y2W1 955 aaKnown RBP8.67□□□□□ -1.02
PTPN20-208ENST00000395727 CCDC9Q9Y3X0 531 aaKnown RBP8.67□□□□□ -1.02
PTPN20-208ENST00000395727 KTN1Q86UP2 1357 aaKnown RBP8.66□□□□□ -1.02
PTPN20-208ENST00000395727 ZC3H6P61129 1189 aaKnown RBP8.66□□□□□ -1.02
PTPN20-208ENST00000395727 NUTM1Q86Y26 1132 aa8.66□□□□□ -1.02
PTPN20-208ENST00000395727 KCNH5Q8NCM2 988 aa8.66□□□□□ -1.02
PTPN20-208ENST00000395727 TBC1D2Q9BYX2 928 aa8.66□□□□□ -1.02
PTPN20-208ENST00000395727 HOXA2O43364 376 aa8.65□□□□□ -1.02
PTPN20-208ENST00000395727 ATP6V1AP38606 617 aa8.65□□□□□ -1.02
PTPN20-208ENST00000395727 DIXDC1Q155Q3 683 aa8.65□□□□□ -1.02
PTPN20-208ENST00000395727 CHRNA2Q15822 529 aa8.65□□□□□ -1.02
PTPN20-208ENST00000395727 NUTM2GQ5VZR2 741 aa8.65□□□□□ -1.02
PTPN20-208ENST00000395727 TESK2Q96S53 571 aa8.65□□□□□ -1.02
PTPN20-208ENST00000395727 PCDHB3Q9Y5E6 796 aa8.65□□□□□ -1.02
PTPN20-208ENST00000395727 PEAK1Q9H792 1746 aa8.65□□□□□ -1.03
PTPN20-208ENST00000395727 LRRC37A3O60309 1634 aa8.65□□□□□ -1.03
PTPN20-208ENST00000395727 OVOS2A0A0J9YW53 1432 aa8.64□□□□□ -1.03
PTPN20-208ENST00000395727 OVOS2Q6IE36 1432 aa8.64□□□□□ -1.03
PTPN20-208ENST00000395727 C11orf95C9JLR9 678 aaPredicted RBP8.64□□□□□ -1.03
PTPN20-208ENST00000395727 TJAP1Q5JTD0 557 aa8.64□□□□□ -1.03
PTPN20-208ENST00000395727 MORN1Q5T089 497 aa8.64□□□□□ -1.03
PTPN20-208ENST00000395727 ARHGEF25Q86VW2 580 aa8.64□□□□□ -1.03
PTPN20-208ENST00000395727 BCL9O00512 1426 aa8.63□□□□□ -1.03
PTPN20-208ENST00000395727 RGPD3A6NKT7 1758 aaPredicted RBP8.63□□□□□ -1.03
PTPN20-208ENST00000395727 RGPD4Q7Z3J3 1758 aa8.63□□□□□ -1.03
PTPN20-208ENST00000395727 EP400Q96L91 3159 aa8.63□□□□□ -1.03
PTPN20-208ENST00000395727 A0A1W2PP64 1363 aa8.63□□□□□ -1.03
PTPN20-208ENST00000395727 PARD3Q8TEW0 1356 aa8.63□□□□□ -1.03
PTPN20-208ENST00000395727 FAM208AQ9UK61 1670 aaKnown RBP8.63□□□□□ -1.03
PTPN20-208ENST00000395727 WDR17Q8IZU2 1322 aa8.63□□□□□ -1.03
PTPN20-208ENST00000395727 SF3B2Q13435 895 aaKnown RBP8.63□□□□□ -1.03
PTPN20-208ENST00000395727 PUS10Q3MIT2 529 aaKnown RBP8.63□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 54.1 ms