RNA–Protein interactions for RNA: ENST00000395453.2

SCAF11-203, Transcript of SR-related CTD associated factor 11, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene SCAF11, Length 1,336 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF11-203ENST00000395453 GYS1P13807 737 aa18.32■□□□□ 0.52
SCAF11-203ENST00000395453 KCNA3P22001 575 aa18.32■□□□□ 0.52
SCAF11-203ENST00000395453 PIM2Q9P1W9 311 aa18.32■□□□□ 0.52
SCAF11-203ENST00000395453 C4AP0C0L4 1744 aa18.31■□□□□ 0.52
SCAF11-203ENST00000395453 NFATC2IPQ8NCF5 419 aa18.31■□□□□ 0.52
SCAF11-203ENST00000395453 DIAPH1O60610 1272 aaKnown RBP18.3■□□□□ 0.52
SCAF11-203ENST00000395453 RPS6KA4O75676 772 aa18.3■□□□□ 0.52
SCAF11-203ENST00000395453 PRELPP51888 382 aa18.3■□□□□ 0.52
SCAF11-203ENST00000395453 DALRD3Q5D0E6 543 aaKnown RBP18.3■□□□□ 0.52
SCAF11-203ENST00000395453 AKAP4Q5JQC9 854 aa18.3■□□□□ 0.52
SCAF11-203ENST00000395453 RNF181Q9P0P0 153 aa18.3■□□□□ 0.52
SCAF11-203ENST00000395453 BRCA1P38398 1863 aaKnown RBP18.3■□□□□ 0.52
SCAF11-203ENST00000395453 CNTNAP4Q9C0A0 1308 aa18.3■□□□□ 0.52
SCAF11-203ENST00000395453 SCN11AQ9UI33 1791 aa18.3■□□□□ 0.52
SCAF11-203ENST00000395453 KCPQ6ZWJ8 1503 aa18.29■□□□□ 0.52
SCAF11-203ENST00000395453 RRAGCQ9HB90 399 aa18.29■□□□□ 0.52
SCAF11-203ENST00000395453 ARFGEF1Q9Y6D6 1849 aa18.29■□□□□ 0.52
SCAF11-203ENST00000395453 HMOX1P09601 288 aa18.28■□□□□ 0.52
SCAF11-203ENST00000395453 SMC1BQ8NDV3 1235 aa18.28■□□□□ 0.52
SCAF11-203ENST00000395453 COL3A1P02461 1466 aaPredicted RBP18.27■□□□□ 0.52
SCAF11-203ENST00000395453 COL5A3P25940 1745 aaPredicted RBP18.27■□□□□ 0.52
SCAF11-203ENST00000395453 CHRDL2Q6WN34 429 aa18.26■□□□□ 0.51
SCAF11-203ENST00000395453 LGR6Q9HBX8 967 aa18.26■□□□□ 0.51
SCAF11-203ENST00000395453 SLC52A2Q9HAB3 445 aa18.25■□□□□ 0.51
SCAF11-203ENST00000395453 MYH14Q7Z406 1995 aaKnown RBP18.25■□□□□ 0.51
SCAF11-203ENST00000395453 RNMTO43148 476 aaKnown RBP18.24■□□□□ 0.51
SCAF11-203ENST00000395453 PTCD1O75127 700 aaKnown RBP18.24■□□□□ 0.51
SCAF11-203ENST00000395453 MTHFSDQ2M296 383 aaKnown RBP18.24■□□□□ 0.51
SCAF11-203ENST00000395453 TNRC6CQ9HCJ0 1690 aaKnown RBP18.24■□□□□ 0.51
SCAF11-203ENST00000395453 ZC3H4Q9UPT8 1303 aaKnown RBP18.23■□□□□ 0.51
SCAF11-203ENST00000395453 ADAMTS7Q9UKP4 1686 aa18.23■□□□□ 0.51
SCAF11-203ENST00000395453 CNGB1Q14028 1251 aaPredicted RBP18.23■□□□□ 0.51
SCAF11-203ENST00000395453 ZBTB12Q9Y330 459 aaPredicted RBP18.23■□□□□ 0.51
SCAF11-203ENST00000395453 MRC1P22897 1456 aa18.22■□□□□ 0.51
SCAF11-203ENST00000395453 VIRMAQ69YN4 1812 aaKnown RBP18.22■□□□□ 0.51
SCAF11-203ENST00000395453 FKBP8Q14318 412 aa18.22■□□□□ 0.51
SCAF11-203ENST00000395453 HSPA1AP0DMV8 641 aaKnown RBP18.21■□□□□ 0.51
SCAF11-203ENST00000395453 HSPA1BP0DMV9 641 aaKnown RBP18.21■□□□□ 0.51
SCAF11-203ENST00000395453 CHRNA5P30532 468 aa18.21■□□□□ 0.51
SCAF11-203ENST00000395453 CRKLP46109 303 aaKnown RBP18.21■□□□□ 0.51
SCAF11-203ENST00000395453 DDR1Q08345 913 aa18.21■□□□□ 0.51
SCAF11-203ENST00000395453 SRP68Q9UHB9 627 aaKnown RBP18.21■□□□□ 0.51
SCAF11-203ENST00000395453 USP42Q9H9J4 1324 aaKnown RBP18.2■□□□□ 0.5
SCAF11-203ENST00000395453 TJP1Q07157 1748 aa18.2■□□□□ 0.5
SCAF11-203ENST00000395453 SBF1O95248 1867 aa18.2■□□□□ 0.5
SCAF11-203ENST00000395453 VEGFAP15692 232 aaPredicted RBP18.2■□□□□ 0.5
SCAF11-203ENST00000395453 U2SURPO15042 1029 aaKnown RBP18.19■□□□□ 0.5
SCAF11-203ENST00000395453 GLTPD2A6NH11 291 aa18.18■□□□□ 0.5
SCAF11-203ENST00000395453 SLC39A6Q13433 755 aa18.18■□□□□ 0.5
SCAF11-203ENST00000395453 INTS5Q6P9B9 1019 aaKnown RBP18.18■□□□□ 0.5
SCAF11-203ENST00000395453 POLRMTO00411 1230 aaKnown RBP18.17■□□□□ 0.5
SCAF11-203ENST00000395453 LMNB1P20700 586 aa18.17■□□□□ 0.5
SCAF11-203ENST00000395453 PPP2R1AP30153 589 aa18.17■□□□□ 0.5
SCAF11-203ENST00000395453 TM4SF1P30408 202 aa18.17■□□□□ 0.5
SCAF11-203ENST00000395453 RASSF7Q02833 373 aa18.17■□□□□ 0.5
SCAF11-203ENST00000395453 CFAP53Q96M91 514 aa18.17■□□□□ 0.5
SCAF11-203ENST00000395453 DNAJC10Q8IXB1 793 aa18.16■□□□□ 0.5
SCAF11-203ENST00000395453 IL17REQ8NFR9 667 aa18.16■□□□□ 0.5
SCAF11-203ENST00000395453 GAS2L2Q8NHY3 880 aa18.16■□□□□ 0.5
SCAF11-203ENST00000395453 GNAT3A8MTJ3 354 aa18.15■□□□□ 0.5
SCAF11-203ENST00000395453 ZPR1O75312 459 aa18.15■□□□□ 0.5
SCAF11-203ENST00000395453 CYP19A1P11511 503 aaPredicted RBP18.15■□□□□ 0.5
SCAF11-203ENST00000395453 VSIG10Q8N0Z9 540 aa18.15■□□□□ 0.5
SCAF11-203ENST00000395453 RSPH6AQ9H0K4 717 aa18.15■□□□□ 0.5
SCAF11-203ENST00000395453 PHACTR3Q96KR7 559 aa18.14■□□□□ 0.49
SCAF11-203ENST00000395453 NUDCQ9Y266 331 aa18.13■□□□□ 0.49
SCAF11-203ENST00000395453 UBR2Q8IWV8 1755 aa18.12■□□□□ 0.49
SCAF11-203ENST00000395453 PRKAR2BP31323 418 aa18.12■□□□□ 0.49
SCAF11-203ENST00000395453 USPL1Q5W0Q7 1092 aa18.12■□□□□ 0.49
SCAF11-203ENST00000395453 CEMIPQ8WUJ3 1361 aa18.11■□□□□ 0.49
SCAF11-203ENST00000395453 SOS1Q07889 1333 aaPredicted RBP18.11■□□□□ 0.49
SCAF11-203ENST00000395453 TTLL6Q8N841 843 aa18.11■□□□□ 0.49
SCAF11-203ENST00000395453 SIPA1L3O60292 1781 aaPredicted RBP18.11■□□□□ 0.49
SCAF11-203ENST00000395453 TEFQ10587 303 aa18.1■□□□□ 0.49
SCAF11-203ENST00000395453 DPY19L2Q6NUT2 758 aa18.1■□□□□ 0.49
SCAF11-203ENST00000395453 ZNF790Q6PG37 636 aa18.09■□□□□ 0.49
SCAF11-203ENST00000395453 U2AF1L5P0DN76 240 aaPredicted RBP18.08■□□□□ 0.49
SCAF11-203ENST00000395453 U2AF1Q01081 240 aaKnown RBP eCLIP18.08■□□□□ 0.49
SCAF11-203ENST00000395453 NFIXQ14938 502 aa18.08■□□□□ 0.49
SCAF11-203ENST00000395453 TTC5Q8N0Z6 440 aa18.08■□□□□ 0.49
SCAF11-203ENST00000395453 ZNF496Q96IT1 587 aaPredicted RBP18.08■□□□□ 0.49
SCAF11-203ENST00000395453 ZBTB1Q9Y2K1 713 aa18.08■□□□□ 0.49
SCAF11-203ENST00000395453 POTECB2RU33 542 aa18.07■□□□□ 0.48
SCAF11-203ENST00000395453 NARFQ9UHQ1 456 aa18.07■□□□□ 0.48
SCAF11-203ENST00000395453 H0YIN7 160 aa18.06■□□□□ 0.48
SCAF11-203ENST00000395453 NFKBIEO00221 500 aa18.06■□□□□ 0.48
SCAF11-203ENST00000395453 STARD3NLO95772 234 aa18.06■□□□□ 0.48
SCAF11-203ENST00000395453 SERPINB2P05120 415 aa18.06■□□□□ 0.48
SCAF11-203ENST00000395453 C2CD5Q86YS7 1000 aa18.06■□□□□ 0.48
SCAF11-203ENST00000395453 TEX13AQ9BXU3 409 aaPredicted RBP18.06■□□□□ 0.48
SCAF11-203ENST00000395453 CREBZFQ9NS37 354 aa18.06■□□□□ 0.48
SCAF11-203ENST00000395453 HEG1Q9ULI3 1381 aa18.06■□□□□ 0.48
SCAF11-203ENST00000395453 COL15A1P39059 1388 aa18.05■□□□□ 0.48
SCAF11-203ENST00000395453 AFDNP55196 1824 aaKnown RBP18.05■□□□□ 0.48
SCAF11-203ENST00000395453 TIAM2Q8IVF5 1701 aa18.04■□□□□ 0.48
SCAF11-203ENST00000395453 EIF5P55010 431 aaKnown RBP18.04■□□□□ 0.48
SCAF11-203ENST00000395453 NRXN2Q9P2S2 1712 aa18.04■□□□□ 0.48
SCAF11-203ENST00000395453 CCDC88AQ3V6T2 1871 aa18.03■□□□□ 0.48
SCAF11-203ENST00000395453 DLEC1Q9Y238 1755 aa18.03■□□□□ 0.48
SCAF11-203ENST00000395453 HTATSF1O43719 755 aaKnown RBP18.03■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms