RNA–Protein interactions for RNA: ENST00000393543.7

MDM1-203, Transcript of Mdm1 nuclear protein, humanhuman

TSL 1 (best) BASIC

Gene MDM1, Length 2,718 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MDM1-203ENST00000393543 GTF2F1P35269 517 aaKnown RBP eCLIP16.12■□□□□ 0.17
MDM1-203ENST00000393543 FAM184AQ8NB25 1140 aa16.12■□□□□ 0.17
MDM1-203ENST00000393543 INTS4Q96HW7 963 aaKnown RBP16.12■□□□□ 0.17
MDM1-203ENST00000393543 HMGN5P82970 282 aaKnown RBP16.11■□□□□ 0.17
MDM1-203ENST00000393543 C16orf71Q8IYS4 520 aaPredicted RBP16.11■□□□□ 0.17
MDM1-203ENST00000393543 PHACTR3Q96KR7 559 aa16.11■□□□□ 0.17
MDM1-203ENST00000393543 OSBPL3Q9H4L5 887 aa16.11■□□□□ 0.17
MDM1-203ENST00000393543 RAPGEF3O95398 923 aa16.11■□□□□ 0.17
MDM1-203ENST00000393543 U2AF2P26368 475 aaKnown RBP eCLIP16.11■□□□□ 0.17
MDM1-203ENST00000393543 NBPF9Q3BBW0 867 aa16.11■□□□□ 0.17
MDM1-203ENST00000393543 POLKQ9UBT6 870 aa16.11■□□□□ 0.17
MDM1-203ENST00000393543 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP16.11■□□□□ 0.17
MDM1-203ENST00000393543 DHX16O60231 1041 aaKnown RBP16.1■□□□□ 0.17
MDM1-203ENST00000393543 RSPH14Q9UHP6 348 aa16.1■□□□□ 0.17
MDM1-203ENST00000393543 CDK12Q9NYV4 1490 aaPredicted RBP16.1■□□□□ 0.17
MDM1-203ENST00000393543 YTHDC2Q9H6S0 1430 aaKnown RBP16.1■□□□□ 0.17
MDM1-203ENST00000393543 CEP85Q6P2H3 762 aa16.1■□□□□ 0.17
MDM1-203ENST00000393543 C8orf58Q8NAV2 365 aa16.1■□□□□ 0.17
MDM1-203ENST00000393543 IL17RAQ96F46 866 aa16.1■□□□□ 0.17
MDM1-203ENST00000393543 TRERF1Q96PN7 1200 aa16.1■□□□□ 0.17
MDM1-203ENST00000393543 ATP7BP35670 1465 aa16.1■□□□□ 0.17
MDM1-203ENST00000393543 RGS12O14924 1447 aa16.1■□□□□ 0.17
MDM1-203ENST00000393543 TMX3Q96JJ7 454 aa16.1■□□□□ 0.17
MDM1-203ENST00000393543 PDCL2Q8N4E4 241 aa16.09■□□□□ 0.17
MDM1-203ENST00000393543 PIBF1Q8WXW3 757 aa16.09■□□□□ 0.17
MDM1-203ENST00000393543 THUMPD2Q9BTF0 503 aaKnown RBP16.09■□□□□ 0.17
MDM1-203ENST00000393543 RIMS2Q9UQ26 1411 aa16.09■□□□□ 0.17
MDM1-203ENST00000393543 HSPA2P54652 639 aa16.09■□□□□ 0.17
MDM1-203ENST00000393543 OTUD7AQ8TE49 926 aaPredicted RBP16.08■□□□□ 0.16
MDM1-203ENST00000393543 LTBP4Q8N2S1 1624 aa16.08■□□□□ 0.16
MDM1-203ENST00000393543 RTL1A6NKG5 1358 aa16.08■□□□□ 0.16
MDM1-203ENST00000393543 DNAJC21Q5F1R6 531 aaKnown RBP16.08■□□□□ 0.16
MDM1-203ENST00000393543 FEZ1Q99689 392 aa16.08■□□□□ 0.16
MDM1-203ENST00000393543 DONSONQ9NYP3 566 aa16.08■□□□□ 0.16
MDM1-203ENST00000393543 MYO5BQ9ULV0 1848 aa16.07■□□□□ 0.16
MDM1-203ENST00000393543 NBPF10Q6P3W6 841 aaKnown RBP16.07■□□□□ 0.16
MDM1-203ENST00000393543 ABCF1Q8NE71 845 aaKnown RBP eCLIP16.07■□□□□ 0.16
MDM1-203ENST00000393543 OGFRQ9NZT2 677 aa16.07■□□□□ 0.16
MDM1-203ENST00000393543 ZBTB12Q9Y330 459 aaPredicted RBP16.07■□□□□ 0.16
MDM1-203ENST00000393543 SETD1BQ9UPS6 1966 aaKnown RBP16.07■□□□□ 0.16
MDM1-203ENST00000393543 IL13P35225 146 aa16.07■□□□□ 0.16
MDM1-203ENST00000393543 SAFB2Q14151 953 aaKnown RBP eCLIP16.07■□□□□ 0.16
MDM1-203ENST00000393543 ICE2Q659A1 982 aa16.07■□□□□ 0.16
MDM1-203ENST00000393543 RNF214Q8ND24 703 aa16.07■□□□□ 0.16
MDM1-203ENST00000393543 ELL2O00472 640 aaPredicted RBP16.06■□□□□ 0.16
MDM1-203ENST00000393543 TMX1Q9H3N1 280 aa16.06■□□□□ 0.16
MDM1-203ENST00000393543 SSH2Q76I76 1423 aa16.06■□□□□ 0.16
MDM1-203ENST00000393543 NEK4P51957 841 aa16.06■□□□□ 0.16
MDM1-203ENST00000393543 SPTLC3Q9NUV7 552 aa16.06■□□□□ 0.16
MDM1-203ENST00000393543 GUCY2CP25092 1073 aa16.05■□□□□ 0.16
MDM1-203ENST00000393543 TERF2Q15554 542 aa16.05■□□□□ 0.16
MDM1-203ENST00000393543 TMEM87AQ8NBN3 555 aa16.05■□□□□ 0.16
MDM1-203ENST00000393543 PTPRCP08575 1304 aa16.05■□□□□ 0.16
MDM1-203ENST00000393543 MAFGO15525 162 aa16.05■□□□□ 0.16
MDM1-203ENST00000393543 AATKQ6ZMQ8 1374 aa16.04■□□□□ 0.16
MDM1-203ENST00000393543 HMOX1P09601 288 aa16.04■□□□□ 0.16
MDM1-203ENST00000393543 NOLC1Q14978 699 aaKnown RBP eCLIP16.04■□□□□ 0.16
MDM1-203ENST00000393543 OTUD6BQ8N6M0 293 aa16.04■□□□□ 0.16
MDM1-203ENST00000393543 TMEM131LA2VDJ0 1609 aa16.04■□□□□ 0.16
MDM1-203ENST00000393543 MINK1Q8N4C8 1332 aaPredicted RBP16.04■□□□□ 0.16
MDM1-203ENST00000393543 CHAMP1Q96JM3 812 aa16.04■□□□□ 0.16
MDM1-203ENST00000393543 KIAA0232Q92628 1395 aa16.04■□□□□ 0.16
MDM1-203ENST00000393543 CCDC189A1A4V9 331 aa16.03■□□□□ 0.16
MDM1-203ENST00000393543 FAM177BA6PVY3 158 aa16.03■□□□□ 0.16
MDM1-203ENST00000393543 EPB41L2O43491 1005 aaKnown RBP16.03■□□□□ 0.16
MDM1-203ENST00000393543 GGT6Q6P531 493 aa16.03■□□□□ 0.16
MDM1-203ENST00000393543 PRAM1Q96QH2 718 aa16.03■□□□□ 0.16
MDM1-203ENST00000393543 HMMRO75330 724 aa16.03■□□□□ 0.16
MDM1-203ENST00000393543 CDK19Q9BWU1 502 aa16.03■□□□□ 0.16
MDM1-203ENST00000393543 SMARCA5O60264 1052 aaPredicted RBP16.03■□□□□ 0.16
MDM1-203ENST00000393543 PDE1AP54750 535 aa16.03■□□□□ 0.16
MDM1-203ENST00000393543 BCL2L12Q9HB09 334 aa16.03■□□□□ 0.16
MDM1-203ENST00000393543 TCHHQ07283 1943 aa16.03■□□□□ 0.16
MDM1-203ENST00000393543 MSH6P52701 1360 aa16.02■□□□□ 0.16
MDM1-203ENST00000393543 FKBP5Q13451 457 aaPredicted RBP16.02■□□□□ 0.16
MDM1-203ENST00000393543 NUTM2DQ5VT03 806 aaPredicted RBP16.02■□□□□ 0.16
MDM1-203ENST00000393543 CC2D2BQ6DHV5 1058 aa16.02■□□□□ 0.16
MDM1-203ENST00000393543 CABP1Q9NZU7 370 aa16.02■□□□□ 0.16
MDM1-203ENST00000393543 WDR33Q9C0J8 1336 aaKnown RBP16.02■□□□□ 0.15
MDM1-203ENST00000393543 DLC1Q96QB1 1528 aa16.02■□□□□ 0.15
MDM1-203ENST00000393543 CTR9Q6PD62 1173 aa16.02■□□□□ 0.15
MDM1-203ENST00000393543 ESYT1Q9BSJ8 1104 aa16.02■□□□□ 0.15
MDM1-203ENST00000393543 BRMS1Q9HCU9 246 aa16.02■□□□□ 0.15
MDM1-203ENST00000393543 CALR3Q96L12 384 aaKnown RBP16.01■□□□□ 0.15
MDM1-203ENST00000393543 CCDC183Q5T5S1 534 aa16.01■□□□□ 0.15
MDM1-203ENST00000393543 SLC26A8Q96RN1 970 aa16.01■□□□□ 0.15
MDM1-203ENST00000393543 SALL3Q9BXA9 1300 aa16.01■□□□□ 0.15
MDM1-203ENST00000393543 ALKQ9UM73 1620 aa16■□□□□ 0.15
MDM1-203ENST00000393543 NRKQ7Z2Y5 1582 aa16■□□□□ 0.15
MDM1-203ENST00000393543 FOXD4L5Q5VV16 416 aaPredicted RBP16■□□□□ 0.15
MDM1-203ENST00000393543 FOXD4L4Q8WXT5 416 aaPredicted RBP16■□□□□ 0.15
MDM1-203ENST00000393543 EDC4Q6P2E9 1401 aaKnown RBP16■□□□□ 0.15
MDM1-203ENST00000393543 USP48Q86UV5 1035 aa15.99■□□□□ 0.15
MDM1-203ENST00000393543 TPM3P06753 285 aa15.99■□□□□ 0.15
MDM1-203ENST00000393543 TDO2P48775 406 aa15.99■□□□□ 0.15
MDM1-203ENST00000393543 RAD51AP2Q09MP3 1159 aa15.99■□□□□ 0.15
MDM1-203ENST00000393543 IDI1Q13907 227 aa15.99■□□□□ 0.15
MDM1-203ENST00000393543 RPAP1Q9BWH6 1393 aaPredicted RBP15.99■□□□□ 0.15
MDM1-203ENST00000393543 ERICH4A6NGS2 130 aa15.98■□□□□ 0.15
MDM1-203ENST00000393543 TNNT1P13805 278 aa15.98■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms