RNA–Protein interactions for RNA: ENST00000391814.5

SHANK1-204, Transcript of SH3 and multiple ankyrin repeat domains 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene SHANK1, Length 6,622 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK1-204ENST00000391814 SPECC1Q5M775 1068 aa18.71■□□□□ 0.59
SHANK1-204ENST00000391814 WWC2Q6AWC2 1192 aa18.71■□□□□ 0.59
SHANK1-204ENST00000391814 CCDC186Q7Z3E2 898 aa18.71■□□□□ 0.59
SHANK1-204ENST00000391814 RASSF4Q9H2L5 321 aa18.71■□□□□ 0.59
SHANK1-204ENST00000391814 SPINK5Q9NQ38 1064 aaPredicted RBP18.71■□□□□ 0.59
SHANK1-204ENST00000391814 PRIM1P49642 420 aaKnown RBP18.71■□□□□ 0.59
SHANK1-204ENST00000391814 ATP2B2Q01814 1243 aa18.71■□□□□ 0.59
SHANK1-204ENST00000391814 JADE2Q9NQC1 790 aa18.71■□□□□ 0.59
SHANK1-204ENST00000391814 SCLT1Q96NL6 688 aa18.71■□□□□ 0.59
SHANK1-204ENST00000391814 DNAI1Q9UI46 699 aa18.71■□□□□ 0.59
SHANK1-204ENST00000391814 ALS2CR12Q96Q35 445 aa18.7■□□□□ 0.58
SHANK1-204ENST00000391814 SOGA3Q5TF21 947 aa18.7■□□□□ 0.58
SHANK1-204ENST00000391814 SKILP12757 684 aa18.7■□□□□ 0.58
SHANK1-204ENST00000391814 NACAP1Q9BZK3 213 aa18.7■□□□□ 0.58
SHANK1-204ENST00000391814 LRPPRCP42704 1394 aaKnown RBP18.7■□□□□ 0.58
SHANK1-204ENST00000391814 CEP112Q8N8E3 955 aa18.69■□□□□ 0.58
SHANK1-204ENST00000391814 KIF6Q6ZMV9 814 aa18.69■□□□□ 0.58
SHANK1-204ENST00000391814 USP48Q86UV5 1035 aa18.69■□□□□ 0.58
SHANK1-204ENST00000391814 GTF3C6Q969F1 213 aa18.69■□□□□ 0.58
SHANK1-204ENST00000391814 RAPGEF4Q8WZA2 1011 aa18.69■□□□□ 0.58
SHANK1-204ENST00000391814 GPRASP1Q5JY77 1395 aa18.69■□□□□ 0.58
SHANK1-204ENST00000391814 HYPKQ9NX55 129 aa18.69■□□□□ 0.58
SHANK1-204ENST00000391814 SLU7O95391 586 aaKnown RBP18.68■□□□□ 0.58
SHANK1-204ENST00000391814 CFAP70Q5T0N1 1121 aa18.68■□□□□ 0.58
SHANK1-204ENST00000391814 GSTTP1A0A1W2PQM5 241 aa18.68■□□□□ 0.58
SHANK1-204ENST00000391814 NAA15Q9BXJ9 866 aaKnown RBP18.68■□□□□ 0.58
SHANK1-204ENST00000391814 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP18.68■□□□□ 0.58
SHANK1-204ENST00000391814 PPM1FP49593 454 aaPredicted RBP18.68■□□□□ 0.58
SHANK1-204ENST00000391814 C8orf76Q96K31 380 aa18.68■□□□□ 0.58
SHANK1-204ENST00000391814 CTNNA3Q9UI47 895 aa18.68■□□□□ 0.58
SHANK1-204ENST00000391814 MYL6BP14649 208 aa18.68■□□□□ 0.58
SHANK1-204ENST00000391814 SULT6B1Q6IMI4 303 aa18.67■□□□□ 0.58
SHANK1-204ENST00000391814 CTNNBL1Q8WYA6 563 aaPredicted RBP18.67■□□□□ 0.58
SHANK1-204ENST00000391814 TDRD12Q587J7 1177 aaKnown RBP18.67■□□□□ 0.58
SHANK1-204ENST00000391814 SLC12A5Q9H2X9 1139 aa18.67■□□□□ 0.58
SHANK1-204ENST00000391814 BMP2KQ9NSY1 1161 aaPredicted RBP18.67■□□□□ 0.58
SHANK1-204ENST00000391814 UBAC1Q9BSL1 405 aa18.67■□□□□ 0.58
SHANK1-204ENST00000391814 ZSCAN25Q6NSZ9 544 aa18.66■□□□□ 0.58
SHANK1-204ENST00000391814 POLA1P09884 1462 aaPredicted RBP18.66■□□□□ 0.58
SHANK1-204ENST00000391814 A0A1B0GUL7 405 aa18.66■□□□□ 0.58
SHANK1-204ENST00000391814 CCT2P78371 535 aaKnown RBP18.66■□□□□ 0.58
SHANK1-204ENST00000391814 TSG101Q99816 390 aa18.66■□□□□ 0.58
SHANK1-204ENST00000391814 SERPINA10Q9UK55 444 aa18.66■□□□□ 0.58
SHANK1-204ENST00000391814 ANKRD30BQ9BXX2 1392 aa18.66■□□□□ 0.58
SHANK1-204ENST00000391814 NBPF11Q86T75 865 aa18.66■□□□□ 0.58
SHANK1-204ENST00000391814 RAB11FIP3O75154 756 aa18.65■□□□□ 0.58
SHANK1-204ENST00000391814 DRC1Q96MC2 740 aa18.65■□□□□ 0.58
SHANK1-204ENST00000391814 WDR70Q9NW82 654 aa18.65■□□□□ 0.58
SHANK1-204ENST00000391814 SPATA24Q86W54 205 aa18.65■□□□□ 0.58
SHANK1-204ENST00000391814 GOLGA1Q92805 767 aa18.65■□□□□ 0.58
SHANK1-204ENST00000391814 CTAGE15A4D2H0 777 aa18.64■□□□□ 0.58
SHANK1-204ENST00000391814 CTAGE8P0CG41 777 aa18.64■□□□□ 0.58
SHANK1-204ENST00000391814 PTGS1P23219 599 aa18.64■□□□□ 0.58
SHANK1-204ENST00000391814 C8orf34Q49A92 452 aa18.64■□□□□ 0.58
SHANK1-204ENST00000391814 GBP6Q6ZN66 633 aa18.64■□□□□ 0.58
SHANK1-204ENST00000391814 CCDC121Q6ZUS5 278 aa18.64■□□□□ 0.58
SHANK1-204ENST00000391814 CTAGE6Q86UF2 777 aa18.64■□□□□ 0.58
SHANK1-204ENST00000391814 CTAGE4Q8IX94 777 aa18.64■□□□□ 0.58
SHANK1-204ENST00000391814 TMCO5BA8MYB1 307 aa18.64■□□□□ 0.57
SHANK1-204ENST00000391814 STAMBPO95630 424 aa18.64■□□□□ 0.57
SHANK1-204ENST00000391814 U2AF2P26368 475 aaKnown RBP eCLIP18.64■□□□□ 0.57
SHANK1-204ENST00000391814 ATRIPQ8WXE1 791 aa18.64■□□□□ 0.57
SHANK1-204ENST00000391814 ZSCAN22P10073 491 aaPredicted RBP18.64■□□□□ 0.57
SHANK1-204ENST00000391814 TMPOP42166 694 aaKnown RBP18.64■□□□□ 0.57
SHANK1-204ENST00000391814 SSH1Q8WYL5 1049 aa18.64■□□□□ 0.57
SHANK1-204ENST00000391814 UBASH3AP57075 661 aa18.63■□□□□ 0.57
SHANK1-204ENST00000391814 JPH4Q96JJ6 628 aa18.63■□□□□ 0.57
SHANK1-204ENST00000391814 KIAA1107Q9UPP5 1409 aa18.63■□□□□ 0.57
SHANK1-204ENST00000391814 CCDC160A6NGH7 325 aa18.63■□□□□ 0.57
SHANK1-204ENST00000391814 PAXIP1Q6ZW49 1069 aaPredicted RBP18.63■□□□□ 0.57
SHANK1-204ENST00000391814 OTUD6BQ8N6M0 293 aa18.63■□□□□ 0.57
SHANK1-204ENST00000391814 CCDC6Q16204 474 aa18.62■□□□□ 0.57
SHANK1-204ENST00000391814 SPG7Q9UQ90 795 aa18.62■□□□□ 0.57
SHANK1-204ENST00000391814 CKAP4Q07065 602 aaKnown RBP18.62■□□□□ 0.57
SHANK1-204ENST00000391814 TMX3Q96JJ7 454 aa18.62■□□□□ 0.57
SHANK1-204ENST00000391814 FEZ1Q99689 392 aa18.62■□□□□ 0.57
SHANK1-204ENST00000391814 CFTRP13569 1480 aa18.62■□□□□ 0.57
SHANK1-204ENST00000391814 PRPF4BQ13523 1007 aaKnown RBP18.62■□□□□ 0.57
SHANK1-204ENST00000391814 NLRP2Q9NX02 1062 aa18.62■□□□□ 0.57
SHANK1-204ENST00000391814 MIS18AQ9NYP9 233 aa18.62■□□□□ 0.57
SHANK1-204ENST00000391814 ARAP1Q96P48 1450 aa18.62■□□□□ 0.57
SHANK1-204ENST00000391814 NEBLO76041 1014 aa18.62■□□□□ 0.57
SHANK1-204ENST00000391814 BOLA2Q9H3K6 86 aa18.62■□□□□ 0.57
SHANK1-204ENST00000391814 CLGNO14967 610 aa18.61■□□□□ 0.57
SHANK1-204ENST00000391814 NAA25Q14CX7 972 aa18.61■□□□□ 0.57
SHANK1-204ENST00000391814 DNAJC25Q9H1X3 360 aa18.61■□□□□ 0.57
SHANK1-204ENST00000391814 KIF1BPQ96EK5 621 aa18.61■□□□□ 0.57
SHANK1-204ENST00000391814 OPA1O60313 960 aa18.61■□□□□ 0.57
SHANK1-204ENST00000391814 HSP90AA4PQ58FG1 418 aa18.61■□□□□ 0.57
SHANK1-204ENST00000391814 C6orf163Q5TEZ5 329 aa18.61■□□□□ 0.57
SHANK1-204ENST00000391814 AOPEPQ8N6M6 819 aa18.61■□□□□ 0.57
SHANK1-204ENST00000391814 PHACTR2O75167 634 aa18.6■□□□□ 0.57
SHANK1-204ENST00000391814 HS1BP3Q53T59 392 aa18.6■□□□□ 0.57
SHANK1-204ENST00000391814 LARP1Q6PKG0 1096 aaKnown RBP18.6■□□□□ 0.57
SHANK1-204ENST00000391814 PLEKHO1Q53GL0 409 aaPredicted RBP18.6■□□□□ 0.57
SHANK1-204ENST00000391814 DNAJC21Q5F1R6 531 aaKnown RBP18.6■□□□□ 0.57
SHANK1-204ENST00000391814 SYT10Q6XYQ8 523 aa18.6■□□□□ 0.57
SHANK1-204ENST00000391814 PUF60Q9UHX1 559 aaKnown RBP18.6■□□□□ 0.57
SHANK1-204ENST00000391814 CASKIN1Q8WXD9 1431 aa18.6■□□□□ 0.57
SHANK1-204ENST00000391814 POLR3DP05423 398 aaPredicted RBP18.6■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms